Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeomoniella_20chlamydospora_20[genbank_20GCA_5F001006345.1_202015- 05-13] 702 sequences; 27,513,354 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq667 95.1 9e-15 >seq667 Length=237617 Score = 95.1 bits (104), Expect = 9e-15 Identities = 160/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 27789 AATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAA--AGC 27846 ||||||||| |||||||| ||| | || || ||| || ||| | || || || | | Sbjct 143593 AATGCAAATCTTTGTGAAGACTTTGACGGGCAAAACAATCACACTGGAAGTTGAGTCATC 143534 Query 27847 ACCGACGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAG 27906 | || || |||| || ||| || || ||||| ||||| |||| || Sbjct 143533 AGACACAATTGACAAC--GTGAAATCCAAGATCCAGGACAAGGAAGGAATTCCACCAGAT 143476 Query 27907 CAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTAC 27966 |||||||| | || || || || ||||||||||| || | || | ||||| |||||| Sbjct 143475 CAGCAACGCCTGATCTTCGCAGGTAAACAATTGGAAGATGGCCGAACTTTGTCAGATTAC 143416 Query 27967 AACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016 || || ||||| ||||||||| | || ||||| ||| | || ||||| || Sbjct 143415 AATATTCAAAAGGAGAGCACTCTCCACTTGGTGTTGAGATTACGTGGTGG 143366 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355859355374754