Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phaeomoniella_20chlamydospora_20[genbank_20GCA_5F001006345.1_202015-
05-13] 702 sequences; 27,513,354 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq96 174 4e-38
seq667 154 3e-32
seq623 132 1e-25
>seq96
Length=163266
Score = 174 bits (192), Expect = 4e-38
Identities = 171/221 (77%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953
||||| | |||||||||||||| ||||| || || |||||||| ||||| | | ||
Sbjct 52860 CGAAGACGGAGGACAAGGTGAAGGGTGGATTCCTTCTGGATGTTGTAATCGGACAAAGTA 52801
Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013
| || ||||| || |||||||| |||||||| || |||||||||||||| || | ||
Sbjct 52800 CGACCGTCTTCGAGTTGCTTGCCGGCGAAGATCAGACGTTGTTGGTCAGGTGGGATGCCC 52741
Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073
||||| ||||||||||| || || || |||||||| || || ||| ||||| ||
Sbjct 52740 TCCTTATCCTGGATCTTGGACTTGACATTGTCGATGGTATCGGACGATTCCACCTCAAGG 52681
Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||||||||| |||||||| ||||| || || | |||||
Sbjct 52680 GTGATCGTCTTACCCGTGAGGGTCTTGACGAAGATTTGCAT 52640
>seq667
Length=237617
Score = 154 bits (170), Expect = 3e-32
Identities = 168/223 (75%), Gaps = 0/223 (0%)
Strand=Plus/Plus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
||| | ||| | || | ||| |||||| ||| ||||| || || ||||| | | ||
Sbjct 143371 ACGTAATCTCAACACCAAGTGGAGAGTGCTCTCCTTTTGAATATTGTAATCTGACAAAGT 143430
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
| |||||||||| || || ||||||||||| |||||||| || || || |||| |||
Sbjct 143431 TCGGCCATCTTCCAATTGTTTACCTGCGAAGATCAGGCGTTGCTGATCTGGTGGAATTCC 143490
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072
|||||||||||||||||| ||||||||| || || ||||| || ||||| || ||
Sbjct 143491 TTCCTTGTCCTGGATCTTGGATTTCACGTTGTCAATTGTGTCTGATGACTCAACTTCCAG 143550
Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115
||||| || || ||||| | |||||| ||||| | ||||||
Sbjct 143551 TGTGATTGTTTTGCCCGTCAAAGTCTTCACAAAGATTTGCATT 143593
Score = 154 bits (170), Expect = 3e-32
Identities = 154/200 (77%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|||||||||||||| || || || || |||||||| ||||| | || || | |||||
Sbjct 143837 AGGACAAGGTGAAGGGTAGATTCCTTCTGGATGTTGTAATCTGAGAGAGTACGGCCATCC 143896
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|||| |||||||| ||||| || || |||||||| || || || | || |||||||||
Sbjct 143897 TCCAATTGCTTGCCAGCGAAAATGAGACGTTGTTGATCGGGTGGGATACCCTCCTTGTCC 143956
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
||||||||| || ||||| |||||||| || || || ||||| || ||||| |||
Sbjct 143957 TGGATCTTTGACTTGACGTTGTCGATGGTATCTGAAGACTCGACCTCAAGGGTGATGGTC 144016
Query 211083 TTTCCCGTGAGAGTCTTTAC 211102
|| || || |||||||| ||
Sbjct 144017 TTGCCAGTAAGAGTCTTGAC 144036
Score = 149 bits (164), Expect = 1e-30
Identities = 153/200 (77%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
|||||| | |||||||| || ||||| ||||| || || ||||| ||||| || ||
Sbjct 144111 ACGAAGGCGGAGGACAAGATGGAGAGTAGACTCCTTCTGAATGTTGTAATCGCTCAGAGT 144170
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
| |||||||| || || ||||| || ||||| || ||||||||||| ||||||| ||
Sbjct 144171 GCGACCATCTTCGAGTTGTTTGCCGGCAAAGATCAGACGTTGTTGGTCGGGAGGAATGCC 144230
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072
||||||||||| ||||| || || || ||||| || || || ||| ||||| ||
Sbjct 144231 CTCCTTGTCCTGAATCTTGGACTTGACATTGTCGATAGTATCGGAAGATTCGACCTCAAG 144290
Query 211073 AGTGATCGTCTTTCCCGTGA 211092
|||||| |||||||| ||||
Sbjct 144291 AGTGATGGTCTTTCCGGTGA 144310
Score = 143 bits (158), Expect = 6e-29
Identities = 165/222 (74%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
||| | ||| || |||||||| || ||| ||| || || ||||| ||||| | | ||
Sbjct 143599 ACGTAATCTCAGCACAAGGTGGAGTGTGCTCTCCTTCTGAATGTTGTAATCTGACAAAGT 143658
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
| ||||||||||| ||||| || || ||||| |||||||| || || || |||| ||
Sbjct 143659 TCGGCCATCTTCCAGTTGCTTTCCAGCAAAGATCAGGCGTTGCTGATCTGGTGGAATCCC 143718
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072
||||| || |||||||| ||||||||| || || ||||| || || || || |
Sbjct 143719 CTCCTTATCTTGGATCTTGGATTTCACGTTATCAATCGTGTCTGATGACTCGACTTCCAA 143778
Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|||||||||||||| || | ||||| ||||| | ||||||
Sbjct 143779 TGTGATCGTCTTTCCGGTCAACGTCTTCACAAAGATCTGCAT 143820
>seq623
Length=266034
Score = 132 bits (146), Expect = 1e-25
Identities = 139/180 (77%), Gaps = 2/180 (1%)
Strand=Plus/Minus
Query 210927 TTTTGGATGTTATAATC-CGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGAT 210985
||||||||||| || || | ||| | | | ||||| || || |||||||| ||||| ||
Sbjct 249705 TTTTGGATGTTGTAGTCGCTCAAAG-TGCGGCCATCCTCAAGTTGCTTGCCGGCGAAAAT 249647
Query 210986 AAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTC 211045
|| ||||||||||| || |||| |||||||||||| || ||||| || || || ||
Sbjct 249646 CAGACGTTGTTGGTCGGGTGGAATTCCTTCCTTGTCTTGAATCTTGGACTTGACATTGTC 249587
Query 211046 GATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAA 211105
|||||| || || ||| ||||| |||||||| || || |||||||| ||||| || ||
Sbjct 249586 GATGGTATCGGATGATTCCACCTCAAGAGTGATGGTTTTACCCGTGAGGGTCTTGACGAA 249527
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159141574152230
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |