Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phaeomoniella_20chlamydospora_20[genbank_20GCA_5F001006345.1_202015-
05-13] 702 sequences; 27,513,354 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq96 118 2e-21
seq667 113 1e-19
seq623 104 5e-17
>seq96
Length=163266
Score = 118 bits (130), Expect = 2e-21
Identities = 154/213 (72%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951
||||||||| ||||| || || || || |||||||||||||||| ||||| | || ||
Sbjct 52852 GAGGACAAGGTGAAGGGTGGATTCCTTCTGGATGTTGTAATCGGACAAAGTACGACCGTC 52793
Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011
||| || || ||||||||||| || | || ||||| | | ||| || ||||| ||
Sbjct 52792 TTCGAGTTGCTTGCCGGCGAAGATCAGACGTTGTTGGTCAGGTGGGATGCCCTCCTTATC 52733
Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071
|| || || |||||| | || | | | || || || || ||||| || || ||
Sbjct 52732 CTGGATCTTGGACTTGACATTGTCGATGGTATCGGACGATTCCACCTCAAGGGTGATCGT 52673
Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| |||||||| ||||| ||||||| |||||
Sbjct 52672 CTTACCCGTGAGGGTCTTGACGAAGATTTGCAT 52640
>seq667
Length=237617
Score = 113 bits (124), Expect = 1e-19
Identities = 151/209 (72%), Gaps = 1/209 (0%)
Strand=Plus/Plus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| || ||||| ||| ||||| || |||||||| | ||||||| |||||||| |
Sbjct 143386 CAAG-TGGAGAGTGCTCTCCTTTTGAATATTGTAATCTGACAAAGTTCGGCCATCTTCCA 143444
Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016
||| || |||||||| || | ||||| || | | ||||||||||| || || |
Sbjct 143445 ATTGTTTACCTGCGAAGATCAGGCGTTGCTGATCTGGTGGAATTCCTTCCTTGTCCTGGA 143504
Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076
| || ||| || | || | ||||||| ||| ||||| || || || |||||||
Sbjct 143505 TCTTGGATTTCACGTTGTCAATTGTGTCTGATGACTCAACTTCCAGTGTGATTGTTTTGC 143564
Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCATT 152105
|||| | ||||||||| |||| ||||||
Sbjct 143565 CCGTCAAAGTCTTCACAAAGATTTGCATT 143593
Score = 102 bits (112), Expect = 2e-16
Identities = 137/191 (72%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951
|||||||||||| ||||||||||| || || |||||||||||| | ||| | |||||
Sbjct 144120 GAGGACAAGATGGAGAGTAGACTCCTTCTGAATGTTGTAATCGCTCAGAGTGCGACCATC 144179
Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011
||| || ||| ||||| ||||| || | || ||||| | | || || ||||| ||
Sbjct 144180 TTCGAGTTGTTTGCCGGCAAAGATCAGACGTTGTTGGTCGGGAGGAATGCCCTCCTTGTC 144239
Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071
||||| || |||||| | || | | || ||| || || |||||||| || ||
Sbjct 144240 CTGAATCTTGGACTTGACATTGTCGATAGTATCGGAAGATTCGACCTCAAGAGTGATGGT 144299
Query 152072 TTTGCCCGTGA 152082
|| || ||||
Sbjct 144300 CTTTCCGGTGA 144310
Score = 98.7 bits (108), Expect = 2e-15
Identities = 143/202 (71%), Gaps = 0/202 (0%)
Strand=Plus/Plus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
|||||||| ||||| ||||| || || |||||||||||||| | | ||| | |||||
Sbjct 143837 AGGACAAGGTGAAGGGTAGATTCCTTCTGGATGTTGTAATCTGAGAGAGTACGGCCATCC 143896
Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
|| | || || ||||| || || | || || || | | ||| || ||||| ||
Sbjct 143897 TCCAATTGCTTGCCAGCGAAAATGAGACGTTGTTGATCGGGTGGGATACCCTCCTTGTCC 143956
Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072
|| || ||| ||||| | || | | | |||||| ||| || ||||| || || ||
Sbjct 143957 TGGATCTTTGACTTGACGTTGTCGATGGTATCTGAAGACTCGACCTCAAGGGTGATGGTC 144016
Query 152073 TTGCCCGTGAGAGTCTTCACGA 152094
||||| || |||||||| ||||
Sbjct 144017 TTGCCAGTAAGAGTCTTGACGA 144038
Score = 91.5 bits (100), Expect = 3e-13
Identities = 152/218 (70%), Gaps = 4/218 (2%)
Strand=Plus/Plus
Query 151889 TCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCC 151948
||| || ||||| || || || ||| || || ||||||||||| | ||||||| ||
Sbjct 143605 TCTCAGCACAAGGTGGAGTGTGCTCTCCTTCTGAATGTTGTAATCTGACAAAGTTCGGCC 143664
Query 151949 ATCTTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006
|||||| || ||||| || || ||||| || | ||||| || | | || || |||
Sbjct 143665 ATCTTCCAGTTGCTTT--CCAGCAAAGATCAGGCGTTGCTGATCTGGTGGAATCCCCTCC 143722
Query 152007 TTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTA 152066
|| ||||| || || ||| || | || | ||||||| ||| ||||| | ||
Sbjct 143723 TTATCTTGGATCTTGGATTTCACGTTATCAATCGTGTCTGATGACTCGACTTCCAATGTG 143782
Query 152067 ATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || || || || | |||||||| |||| ||||||
Sbjct 143783 ATCGTCTTTCCGGTCAACGTCTTCACAAAGATCTGCAT 143820
>seq623
Length=266034
Score = 104 bits (114), Expect = 5e-17
Identities = 131/180 (73%), Gaps = 0/180 (0%)
Strand=Plus/Minus
Query 151917 TTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATA 151976
|||||||||||||| ||| ||||| | ||||| || || || |||||||| ||
Sbjct 249705 TTTTGGATGTTGTAGTCGCTCAAAGTGCGGCCATCCTCAAGTTGCTTGCCGGCGAAAATC 249646
Query 151977 AGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCT 152036
|| | || ||||| | | ||||||||||| |||||||| || |||||| | ||
Sbjct 249645 AGACGTTGTTGGTCGGGTGGAATTCCTTCCTTGTCTTGAATCTTGGACTTGACATTGTCG 249586
Query 152037 ACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAG 152096
| | | || || || || |||||||| || ||||| |||||||| ||||| ||||||
Sbjct 249585 ATGGTATCGGATGATTCCACCTCAAGAGTGATGGTTTTACCCGTGAGGGTCTTGACGAAG 249526
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153810422103042
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |