Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeomoniella_20chlamydospora_20[genbank_20GCA_5F001006345.1_202015- 05-13] 702 sequences; 27,513,354 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq667 156 9e-33 seq96 150 4e-31 seq623 143 6e-29 seq95 113 9e-20 >seq667 Length=237617 Score = 156 bits (172), Expect = 9e-33 Identities = 157/204 (77%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| ||||| || || ||||| | || || || || |||||||| || Sbjct 144105 ACCACCACGAAGGCGGAGGACAAGATGGAGAGTAGACTCCTTCTGAATGTTGTAATCGCT 144164 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || ||||| ||||| || |||||||| ||||||||||||| |||||||||||| || Sbjct 144165 CAGAGTGCGACCATCTTCGAGTTGTTTGCCGGCAAAGATCAGACGTTGTTGGTCGGGAGG 144224 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| ||||||||||| || ||||| | || || | |||||||| || |||| |||||| Sbjct 144225 AATGCCCTCCTTGTCCTGAATCTTGGACTTGACATTGTCGATAGTATCGGAAGATTCGAC 144284 Query 283052 TTCGAGAGTGATCGTCTTACCCGT 283075 || |||||||| ||||| || || Sbjct 144285 CTCAAGAGTGATGGTCTTTCCGGT 144308 Score = 152 bits (168), Expect = 1e-31 Identities = 152/197 (77%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 282903 GTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCG 282962 ||||| || || || |||||||| || | | || |||||||| || ||||| || || Sbjct 143624 GTGCTCTCCTTCTGAATGTTGTAATCTGACAAAGTTCGGCCATCTTCCAGTTGCTTTCCA 143683 Query 282963 GCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTT 283022 |||||||||| ||||| || || ||||| |||||||| ||||||||||| | ||| Sbjct 143684 GCAAAGATCAGGCGTTGCTGATCTGGTGGAATCCCCTCCTTATCTTGGATCTTGGATTTC 143743 Query 283023 ACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTC 283082 ||| |||| || ||||| || | |||||||| | ||||||||||| || ||||| ||| Sbjct 143744 ACGTTATCAATCGTGTCTGATGACTCGACTTCCAATGTGATCGTCTTTCCGGTCAACGTC 143803 Query 283083 TTAACGAATATCTGCAT 283099 || || || |||||||| Sbjct 143804 TTCACAAAGATCTGCAT 143820 Score = 150 bits (166), Expect = 4e-31 Identities = 164/218 (75%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || ||||| || || || | || ||| || ||||||||||| || | Sbjct 143821 ACCACCACGGAGACGAAGGACAAGGTGAAGGGTAGATTCCTTCTGGATGTTGTAATCTGA 143880 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || ||||||||||| | ||| || || || || || | ||||||||| || || Sbjct 143881 GAGAGTACGGCCATCCTCCAATTGCTTGCCAGCGAAAATGAGACGTTGTTGATCGGGTGG 143940 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 |||||||||||||| |||||||||| || ||| | ||||| || || |||| ||||| Sbjct 143941 GATACCCTCCTTGTCCTGGATCTTTGACTTGACGTTGTCGATGGTATCTGAAGACTCGAC 144000 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGA 283089 || || ||||| ||||| || || | |||||| |||| Sbjct 144001 CTCAAGGGTGATGGTCTTGCCAGTAAGAGTCTTGACGA 144038 Score = 138 bits (152), Expect = 2e-27 Identities = 168/229 (73%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| | | | |||| || | ||||| || ||||| || ||||| || | Sbjct 143365 ACCACCACGTAATCTCAACACCAAGTGGAGAGTGCTCTCCTTTTGAATATTGTAATCTGA 143424 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 | || |||||||| || | |||||| || || ||||||| ||||| || || || Sbjct 143425 CAAAGTTCGGCCATCTTCCAATTGTTTACCTGCGAAGATCAGGCGTTGCTGATCTGGTGG 143484 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| || |||||||| |||||||| | ||| ||| | || || ||||| || | || || Sbjct 143485 AATTCCTTCCTTGTCCTGGATCTTGGATTTCACGTTGTCAATTGTGTCTGATGACTCAAC 143544 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATT 283100 ||| || ||||| || || |||||||||||||| || || || |||||| Sbjct 143545 TTCCAGTGTGATTGTTTTGCCCGTCAAAGTCTTCACAAAGATTTGCATT 143593 >seq96 Length=163266 Score = 150 bits (166), Expect = 4e-31 Identities = 170/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| || || || || || || || | ||| ||| || ||||||||||| || | Sbjct 52867 ACCACCTCGAAGACGGAGGACAAGGTGAAGGGTGGATTCCTTCTGGATGTTGTAATCGGA 52808 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 | || || || || || ||||| || ||||| ||||||| ||||||||||||| || Sbjct 52807 CAAAGTACGACCGTCTTCGAGTTGCTTGCCGGCGAAGATCAGACGTTGTTGGTCAGGTGG 52748 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || |||||||| || |||||||| | || || | ||||| || || || | ||| || Sbjct 52747 GATGCCCTCCTTATCCTGGATCTTGGACTTGACATTGTCGATGGTATCGGACGATTCCAC 52688 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || ||||||||||||||||| | ||||| ||||| || ||||| Sbjct 52687 CTCAAGGGTGATCGTCTTACCCGTGAGGGTCTTGACGAAGATTTGCAT 52640 >seq623 Length=266034 Score = 143 bits (158), Expect = 6e-29 Identities = 139/179 (78%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971 ||||||||||||||||| | |||||||||||||| ||||| || ||||| || ||| Sbjct 249705 TTTTGGATGTTGTAGTCGCTCAAAGTGCGGCCATCCTCAAGTTGCTTGCCGGCGAAAATC 249646 Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCG 283031 | |||||||||||| ||||| || ||||||||||| ||||| | || || | ||| Sbjct 249645 AGACGTTGTTGGTCGGGTGGAATTCCTTCCTTGTCTTGAATCTTGGACTTGACATTGTCG 249586 Query 283032 ATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090 || || || || | ||| || || |||||||| || |||||||| | ||||| ||||| Sbjct 249585 ATGGTATCGGATGATTCCACCTCAAGAGTGATGGTTTTACCCGTGAGGGTCTTGACGAA 249527 >seq95 Length=51392 Score = 113 bits (124), Expect = 9e-20 Identities = 165/233 (71%), Gaps = 3/233 (1%) Strand=Plus/Plus Query 316608 CAGCTTCAGGTTGGGTTCGTAATGGATGATAGAAGTACAGACAGCATCGAGGAAACCAGA 316667 ||||||| || ||||||||||| |||| |||||||| |||| | ||| ||||| Sbjct 37846 CAGCTTC---TTCTGTTCGTAATGGTAGATATCGGTACAGACTTCATCCAAGAATCCAGA 37902 Query 316668 ATCGTGTGATACAATCACACATGAAACGCCTTTTAGGTTGACCAGATAGTCGATCAGCCA 316727 ||||| || ||||||| | | | | | | | || ||||| || || ||| Sbjct 37903 GTCGTGAGAAACAATCAAAGACGTGATCTCGGTATGTTTCTTGAGATATTCTTGCAACCA 37962 Query 316728 GCTCACATTCGACACAGAAAGATGGTTGGTCGGTTCGTCAAGTAGTAGTAGCTTCGCGTC 316787 | ||||| | ||| ||||||||||| ||||||||||| || || | | || || Sbjct 37963 TTTGACATTGGCAACATCGAGATGGTTGGTAGGTTCGTCAAGAAGGAGAACATCTGCATC 38022 Query 316788 CAACAGCATAGCGCGTGCGAGAGCAAGCTTCATTTTCCACCCCCCGGAAAGAG 316840 |||||||||||| || || || || | |||||||||||| || || || |||| Sbjct 38023 CAACAGCATAGCACGGGCAAGTGCCAACTTCATTTTCCAACCTCCAGATAGAG 38075 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046729785235108