Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phaeomoniella_20chlamydospora_20[genbank_20GCA_5F001006345.1_202015-
05-13] 702 sequences; 27,513,354 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq96 143 2e-29
seq667 123 2e-23
seq623 93.3 3e-14
>seq96
Length=163266
Score = 143 bits (158), Expect = 2e-29
Identities = 162/215 (75%), Gaps = 4/215 (2%)
Strand=Plus/Minus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| |||||||| ||| ||||| |||||||||||||||| | || |||| ||
Sbjct 52848 ACAAGGTGAAGGGTGGATTCCTTCTGGATGTTGTAATCGGACAAAGTACGACCGTCTTCG 52789
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|| ||||| ||||| ||||||| ||| || || || | || | || ||||| |||
Sbjct 52788 AGTTGCTTGCCGGCGAAGATCAGACGTTGTTGGTCAGGTGGGATGCCCTCCTTATCCTGG 52729
Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306
||||| ||| || ||| | ||||| |||| ||||||||||| | || |||||||
Sbjct 52728 ATCTTGGACTTGACATTGT--CGATGGTATCGGACGATTCCACCTCAAGGGTGATCGTCT 52671
Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCATGATG 44341
| |||||||||||||| ||||||||||||||||||
Sbjct 52670 TACCCGTGAGGGTCTTGACGAAGATTTGCATGATG 52636
>seq667
Length=237617
Score = 123 bits (136), Expect = 2e-23
Identities = 171/236 (72%), Gaps = 4/236 (2%)
Strand=Plus/Plus
Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163
|| |||||| || | | ||||| ||| ||||| || ||||||||||| || ||||||||
Sbjct 143587 TTGCATTCCGCCACGTAATCTCAGCACAAGGTGGAGTGTGCTCTCCTTCTGAATGTTGTA 143646
Query 44164 ATCGGCGA--GTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGA 44221
||| | | ||| | || | || ||||| ||||| || |||||||||| || ||||||
Sbjct 143647 ATCTGACAAAGTTCG-GC-CATCTTCCAGTTGCTTTCCAGCAAAGATCAGGCGTTGCTGA 143704
Query 44222 TCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCG 44281
|||| || | || ||||| || ||||| |||| | | || ||||| |
Sbjct 143705 TCTGGTGGAATCCCCTCCTTATCTTGGATCTTGGATTTCACGTTATCAATCGTGTCTGAT 143764
Query 44282 GATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| || || |||| || ||||||||||| || | |||||||| ||||| |||||
Sbjct 143765 GACTCGACTTCCAATGTGATCGTCTTTCCGGTCAACGTCTTCACAAAGATCTGCAT 143820
Score = 113 bits (124), Expect = 3e-20
Identities = 158/218 (72%), Gaps = 4/218 (2%)
Strand=Plus/Plus
Query 44122 TCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGA--GTTGGCGC 44179
||||||||||| ||| || |||||||||||||| || |||||||| | | ||| | ||
Sbjct 143377 TCTCAACACCAAGTGGAGAGTGCTCTCCTTTTGAATATTGTAATCTGACAAAGTTCG-GC 143435
Query 44180 TCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCC 44239
| || |||| || || || || ||||||| || |||||||||| || | ||||||
Sbjct 143436 -CATCTTCCAATTGTTTACCTGCGAAGATCAGGCGTTGCTGATCTGGTGGAATTCCTTCC 143494
Query 44240 TTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTA 44299
|| ||| ||||| |||| | | || ||||| | || || || |||| ||
Sbjct 143495 TTGTCCTGGATCTTGGATTTCACGTTGTCAATTGTGTCTGATGACTCAACTTCCAGTGTG 143554
Query 44300 ATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| || || ||||| | |||||||| |||||||||||
Sbjct 143555 ATTGTTTTGCCCGTCAAAGTCTTCACAAAGATTTGCAT 143592
>seq623
Length=266034
Score = 93.3 bits (102), Expect = 3e-14
Identities = 132/184 (72%), Gaps = 4/184 (2%)
Strand=Plus/Minus
Query 44148 CCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGA 44207
|||||||||||||||| ||| | ||| | || || || ||||| ||||| || |
Sbjct 249707 CCTTTTGGATGTTGTAGTCGCTCAAAGTGCGGCCATCCTCAAGTTGCTTGCCGGCGAAAA 249648
Query 44208 TCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGT 44265
||| ||| || || || | || | |||||||| || ||||| ||| || |||
Sbjct 249647 TCAGACGTTGTTGGTCGGGTGGAATTCCTTCCTTGTCTTGAATCTTGGACTTGACATTGT 249588
Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325
| ||||| |||| ||||||||||| | || || || || |||||||||||||| ||
Sbjct 249587 --CGATGGTATCGGATGATTCCACCTCAAGAGTGATGGTTTTACCCGTGAGGGTCTTGAC 249530
Query 44326 GAAG 44329
||||
Sbjct 249529 GAAG 249526
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359987320057134
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |