Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeomoniella_20chlamydospora_20[genbank_20GCA_5F001006345.1_202015- 05-13] 702 sequences; 27,513,354 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq96 159 8e-34 seq667 140 8e-28 >seq96 Length=163266 Score = 159 bits (176), Expect = 8e-34 Identities = 159/206 (77%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| || || ||||| || || ||||||||||| ||||||||| || || Sbjct 52643 CAAATCTTCGTCAAGACCCTCACGGGTAAGACGATCACCCTTGAGGTGGAATCGTCCGAT 52702 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || ||||| ||||| ||||| || || || ||||| || ||||| ||| Sbjct 52703 ACCATCGACAATGTCAAGTCCAAGATCCAGGATAAGGAGGGCATCCCACCTGACCAACAA 52762 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||||||||| || || |||||||| || | ||| | ||||||| ||| || Sbjct 52763 CGTCTGATCTTCGCCGGCAAGCAACTCGAAGACGGTCGTACTTTGTCCGATTACAACATC 52822 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || ||||| || || || ||||| Sbjct 52823 CAGAAGGAATCCACCCTTCACCTTGT 52848 >seq667 Length=237617 Score = 140 bits (154), Expect = 8e-28 Identities = 143/187 (76%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 177943 TCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAAC 178002 |||| ||||| || ||||| || ||||| ||| || || || ||||| || ||||| Sbjct 144310 TCACCGGAAAGACCATCACTCTTGAGGTCGAATCTTCCGATACTATCGACAATGTCAAGT 144251 Query 178003 AAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAA 178062 |||||||||||||| || || || ||||| ||||| ||||| || ||||| ||||| | Sbjct 144250 CCAAGATTCAGGACAAGGAGGGCATTCCTCCCGACCAACAACGTCTGATCTTTGCCGGCA 144191 Query 178063 AACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGC 178122 |||| ||||||||||| | ||||| |||||| ||| | || || || || || || | Sbjct 144190 AACAACTCGAAGATGGTCGCACTCTGAGCGATTACAACATTCAGAAGGAGTCTACTCTCC 144131 Query 178123 ATCTTGT 178129 ||||||| Sbjct 144130 ATCTTGT 144124 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203720373190188