Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phaeomoniella_20chlamydospora_20[genbank_20GCA_5F001006345.1_202015-
05-13] 702 sequences; 27,513,354 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq96 159 8e-34
seq667 140 8e-28
>seq96
Length=163266
Score = 159 bits (176), Expect = 8e-34
Identities = 159/206 (77%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| ||||| || || ||||| || || ||||||||||| ||||||||| || ||
Sbjct 52643 CAAATCTTCGTCAAGACCCTCACGGGTAAGACGATCACCCTTGAGGTGGAATCGTCCGAT 52702
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| || ||||| ||||| ||||| || || || ||||| || ||||| |||
Sbjct 52703 ACCATCGACAATGTCAAGTCCAAGATCCAGGATAAGGAGGGCATCCCACCTGACCAACAA 52762
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || ||||||||||| || || |||||||| || | ||| | ||||||| ||| ||
Sbjct 52763 CGTCTGATCTTCGCCGGCAAGCAACTCGAAGACGGTCGTACTTTGTCCGATTACAACATC 52822
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| || ||||| || || || |||||
Sbjct 52823 CAGAAGGAATCCACCCTTCACCTTGT 52848
>seq667
Length=237617
Score = 140 bits (154), Expect = 8e-28
Identities = 143/187 (76%), Gaps = 0/187 (0%)
Strand=Plus/Minus
Query 177943 TCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAAC 178002
|||| ||||| || ||||| || ||||| ||| || || || ||||| || |||||
Sbjct 144310 TCACCGGAAAGACCATCACTCTTGAGGTCGAATCTTCCGATACTATCGACAATGTCAAGT 144251
Query 178003 AAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAA 178062
|||||||||||||| || || || ||||| ||||| ||||| || ||||| ||||| |
Sbjct 144250 CCAAGATTCAGGACAAGGAGGGCATTCCTCCCGACCAACAACGTCTGATCTTTGCCGGCA 144191
Query 178063 AACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGC 178122
|||| ||||||||||| | ||||| |||||| ||| | || || || || || || |
Sbjct 144190 AACAACTCGAAGATGGTCGCACTCTGAGCGATTACAACATTCAGAAGGAGTCTACTCTCC 144131
Query 178123 ATCTTGT 178129
|||||||
Sbjct 144130 ATCTTGT 144124
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203720373190188
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |