Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeomoniella_20chlamydospora_20[genbank_20GCA_5F001006345.1_202015- 05-13] 702 sequences; 27,513,354 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq96 129 5e-25 seq667 93.3 4e-14 seq623 86.0 6e-12 >seq96 Length=163266 Score = 129 bits (142), Expect = 5e-25 Identities = 170/234 (73%), Gaps = 4/234 (2%) Strand=Plus/Minus Query 41632 ACCGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTC 41691 ||| || || || ||||| | || || || || ||| |||||||| ||||| || || Sbjct 52870 ACCACCACCTCGAAGACGGAGGACAAGGTGAAGGGTGGATTCCTTCTGGATGTTGTAATC 52811 Query 41692 GGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGC 41751 ||| | || || |||| ||||| |||||||||||||| ||||| || |||||||| | Sbjct 52810 GGACAAAGTACGACCGTCTTCGAGTTGCTTGCCGGCGAAGATCAGACGTTGTTGGTCAGG 52751 Query 41752 GGGAACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGAC 41809 || | || |||||| ||| ||| || ||| || | || | || ||| ||| Sbjct 52750 TGGGATGCCCTCCTTATCCTGGATCTTGGACTTGACATTGTCG--ATGGTATCGGACGAT 52693 Query 41810 TCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 |||||||| | || ||||| |||||||| || ||||| ||||| || |||||| Sbjct 52692 TCCACCTCAAGGGTGATCGTCTTACCCGTGAGGGTCTTGACGAAGATTTGCATG 52639 >seq667 Length=237617 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 ||||| |||| | | ||| || || || |||||||||||||||||||| || || || Sbjct 143594 CCGCCACGTAATCTCAGCACAAGGTGGAGTGTGCTCTCCTTCTGAATGTTGTAATCTGAC 143653 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 | || || | || || || ||||| || || || |||||||| || || || | ||| Sbjct 143654 AAAGTTCGGCCATCTTCCAGTTGCTTTCCAGCAAAGATCAGGCGTTGCTGATCTGGTGGA 143713 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | |||||| | | || | || | || ||| | | ||||| ||||| || Sbjct 143714 ATCCCCTCCTTAT-CTTGGATCTTGGATTTCACGTTATCAATCGTGTCTGATGACTCGAC 143772 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||| || ||||| || || |||| |||||| || || |||||||| Sbjct 143773 TTCCAATGTGATCGTCTTTCCGGTCAACGTCTTCACAAAGATCTGCAT 143820 Score = 91.5 bits (100), Expect = 1e-13 Identities = 101/135 (75%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || | || ||||| || || ||||||||||||||| || ||| Sbjct 144106 CCACCACGAAGGCGGAGGACAAGATGGAGAGTAGACTCCTTCTGAATGTTGTAATCGCTC 144165 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| | || ||||| || |||||||| || ||||| || |||||||| | ||| Sbjct 144166 AGAGTGCGACCATCTTCGAGTTGTTTGCCGGCAAAGATCAGACGTTGTTGGTCGGGAGGA 144225 Query 41756 ACGCTCTCCTTGTCC 41770 | || |||||||||| Sbjct 144226 ATGCCCTCCTTGTCC 144240 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/213 (69%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 41651 AACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCG 41710 ||||||| || || ||||||||||| ||||| || || || || | || || | || Sbjct 143381 AACACCAAGTGGAGAGTGCTCTCCTTTTGAATATTGTAATCTGACAAAGTTCGGCCATCT 143440 Query 41711 TCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCC 41770 || | || || || ||||| |||||||| || || || | |||| | ||||||||| Sbjct 143441 TCCAATTGTTTACCTGCGAAGATCAGGCGTTGCTGATCTGGTGGAATTCCTTCCTTGTCC 143500 Query 41771 ATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGT 41829 || | || | || ||| | | | ||||| ||||| || |||| || || || Sbjct 143501 -TGGATCTTGGATTTCACGTTGTCAATTGTGTCTGATGACTCAACTTCCAGTGTGATTGT 143559 Query 41830 TTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||| ||||||| ||||| || || || ||||| Sbjct 143560 TTTGCCCGTCAAAGTCTTCACAAAGATTTGCAT 143592 >seq623 Length=266034 Score = 86.0 bits (94), Expect = 6e-12 Identities = 132/184 (72%), Gaps = 6/184 (3%) Strand=Plus/Minus Query 41673 CCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 41732 |||| || ||||| |||||| | ||||| | || || || |||||||||||||| | Sbjct 249707 CCTTTTGGATGTTGTAGTCGCTCAAAGTGCGGCCATCCTCAAGTTGCTTGCCGGCGAAAA 249648 Query 41733 TCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTG-CTT--CAACG 41789 |||| || |||||||| | |||| | ||||||| | ||| | || | ||| || | Sbjct 249647 TCAGACGTTGTTGGTCGGGTGGAATTCCTTCCTTGT-CTTGAATCTTGGACTTGACATTG 249589 Query 41790 ACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTA 41849 || | || ||| || |||||||| | || || ||||||||||| || ||||| | Sbjct 249588 TCG--ATGGTATCGGATGATTCCACCTCAAGAGTGATGGTTTTACCCGTGAGGGTCTTGA 249531 Query 41850 CGAA 41853 |||| Sbjct 249530 CGAA 249527 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462299943282400