Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phaeomoniella_20chlamydospora_20[genbank_20GCA_5F001006345.1_202015-
05-13] 702 sequences; 27,513,354 total letters
Query= NC_033780.1
Length=144510
Score E
Sequences producing significant alignments: (Bits) Value
seq96 129 5e-25
seq667 93.3 4e-14
seq623 86.0 6e-12
>seq96
Length=163266
Score = 129 bits (142), Expect = 5e-25
Identities = 170/234 (73%), Gaps = 4/234 (2%)
Strand=Plus/Minus
Query 41632 ACCGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTC 41691
||| || || || ||||| | || || || || ||| |||||||| ||||| || ||
Sbjct 52870 ACCACCACCTCGAAGACGGAGGACAAGGTGAAGGGTGGATTCCTTCTGGATGTTGTAATC 52811
Query 41692 GGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGC 41751
||| | || || |||| ||||| |||||||||||||| ||||| || |||||||| |
Sbjct 52810 GGACAAAGTACGACCGTCTTCGAGTTGCTTGCCGGCGAAGATCAGACGTTGTTGGTCAGG 52751
Query 41752 GGGAACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGAC 41809
|| | || |||||| ||| ||| || ||| || | || | || ||| |||
Sbjct 52750 TGGGATGCCCTCCTTATCCTGGATCTTGGACTTGACATTGTCG--ATGGTATCGGACGAT 52693
Query 41810 TCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863
|||||||| | || ||||| |||||||| || ||||| ||||| || ||||||
Sbjct 52692 TCCACCTCAAGGGTGATCGTCTTACCCGTGAGGGTCTTGACGAAGATTTGCATG 52639
>seq667
Length=237617
Score = 93.3 bits (102), Expect = 4e-14
Identities = 159/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
||||| |||| | | ||| || || || |||||||||||||||||||| || || ||
Sbjct 143594 CCGCCACGTAATCTCAGCACAAGGTGGAGTGTGCTCTCCTTCTGAATGTTGTAATCTGAC 143653
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
| || || | || || || ||||| || || || |||||||| || || || | |||
Sbjct 143654 AAAGTTCGGCCATCTTCCAGTTGCTTTCCAGCAAAGATCAGGCGTTGCTGATCTGGTGGA 143713
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814
| | |||||| | | || | || | || ||| | | ||||| ||||| ||
Sbjct 143714 ATCCCCTCCTTAT-CTTGGATCTTGGATTTCACGTTATCAATCGTGTCTGATGACTCGAC 143772
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|||| || ||||| || || |||| |||||| || || ||||||||
Sbjct 143773 TTCCAATGTGATCGTCTTTCCGGTCAACGTCTTCACAAAGATCTGCAT 143820
Score = 91.5 bits (100), Expect = 1e-13
Identities = 101/135 (75%), Gaps = 0/135 (0%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || || || | || ||||| || || ||||||||||||||| || |||
Sbjct 144106 CCACCACGAAGGCGGAGGACAAGATGGAGAGTAGACTCCTTCTGAATGTTGTAATCGCTC 144165
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|| ||||| | || ||||| || |||||||| || ||||| || |||||||| | |||
Sbjct 144166 AGAGTGCGACCATCTTCGAGTTGTTTGCCGGCAAAGATCAGACGTTGTTGGTCGGGAGGA 144225
Query 41756 ACGCTCTCCTTGTCC 41770
| || ||||||||||
Sbjct 144226 ATGCCCTCCTTGTCC 144240
Score = 84.2 bits (92), Expect = 2e-11
Identities = 148/213 (69%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 41651 AACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCG 41710
||||||| || || ||||||||||| ||||| || || || || | || || | ||
Sbjct 143381 AACACCAAGTGGAGAGTGCTCTCCTTTTGAATATTGTAATCTGACAAAGTTCGGCCATCT 143440
Query 41711 TCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCC 41770
|| | || || || ||||| |||||||| || || || | |||| | |||||||||
Sbjct 143441 TCCAATTGTTTACCTGCGAAGATCAGGCGTTGCTGATCTGGTGGAATTCCTTCCTTGTCC 143500
Query 41771 ATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGT 41829
|| | || | || ||| | | | ||||| ||||| || |||| || || ||
Sbjct 143501 -TGGATCTTGGATTTCACGTTGTCAATTGTGTCTGATGACTCAACTTCCAGTGTGATTGT 143559
Query 41830 TTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
||| ||||||| ||||| || || || |||||
Sbjct 143560 TTTGCCCGTCAAAGTCTTCACAAAGATTTGCAT 143592
>seq623
Length=266034
Score = 86.0 bits (94), Expect = 6e-12
Identities = 132/184 (72%), Gaps = 6/184 (3%)
Strand=Plus/Minus
Query 41673 CCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 41732
|||| || ||||| |||||| | ||||| | || || || |||||||||||||| |
Sbjct 249707 CCTTTTGGATGTTGTAGTCGCTCAAAGTGCGGCCATCCTCAAGTTGCTTGCCGGCGAAAA 249648
Query 41733 TCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTG-CTT--CAACG 41789
|||| || |||||||| | |||| | ||||||| | ||| | || | ||| || |
Sbjct 249647 TCAGACGTTGTTGGTCGGGTGGAATTCCTTCCTTGT-CTTGAATCTTGGACTTGACATTG 249589
Query 41790 ACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTA 41849
|| | || ||| || |||||||| | || || ||||||||||| || ||||| |
Sbjct 249588 TCG--ATGGTATCGGATGATTCCACCTCAAGAGTGATGGTTTTACCCGTGAGGGTCTTGA 249531
Query 41850 CGAA 41853
||||
Sbjct 249530 CGAA 249527
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462299943282400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |