Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialocephala_20scopiformis_20[genbank_20GCA_5F001500285.1_202016- 01-07] 71 sequences; 48,876,257 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq4 123 5e-23 >seq4 Length=1888314 Score = 123 bits (136), Expect = 5e-23 Identities = 178/251 (71%), Gaps = 0/251 (0%) Strand=Plus/Minus Query 230387 TCATTACAGAAGCAGTTGAAAACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGCC 230446 ||||||| ||||| || || | || | |||||| | ||| ||| |||| ||| | Sbjct 1224378 TCATTACCGAAGCTGTCGAGATTGAGCAAGAGTTCTTGACTGAGGCTCTTCCTTGTGCAC 1224319 Query 230447 TTATTGGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATTT 230506 | ||||||||||| | | || ||| || |||||||| ||||| || || || | Sbjct 1224318 TCCTTGGCATGAACTCGAATCTGATGAAGCAATACATCGAGTTCGTCGCTGATCGTCTGC 1224259 Query 230507 TTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGC 230566 || |||| || || | ||||| || ||||| ||| ||||| |||| ||||||||| Sbjct 1224258 TTCTTGCCCTCGGCAATGAGAAGGTCTACAAGTCTGCCAACCCATTTGACTTTATGGAGA 1224199 Query 230567 TCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGGC 230626 ||| ||||| || ||||| |||||||| || ||||| || ||||||| || | Sbjct 1224198 ACATCTCGCTCGCTGGCAAGACTAACTTCTTTGAGAAGCGCGTTGGTGACTACCAAAAAG 1224139 Query 230627 CTGGTGTGATG 230637 ||||||| ||| Sbjct 1224138 CTGGTGTCATG 1224128 Score = 86.0 bits (94), Expect = 1e-11 Identities = 116/159 (73%), Gaps = 2/159 (1%) Strand=Plus/Minus Query 229780 ATGTGGGATATGTACAAGAAGGCGGTGGCAACTTTCTGGACCACTGAGGAAGTTCCTCTG 229839 || ||| | |||||||||||||| | ||| ||||||||||| | || || || ||| Sbjct 1225039 ATCTGGCAGATGTACAAGAAGGCCGAGGCGTCTTTCTGGACCGCCGAAGAGATTGATCT- 1224981 Query 229840 AACGCAG-ACGTCGTCGACTGGCGTGAGAAACTCAATGACGACGAACGTCATTTCATCAA 229898 | || || | || ||||||| | || |||||||||||||| ||| | |||||| Sbjct 1224980 ATCGAAGGATCTCCACGACTGGAACAACAAGCTCAATGACGACGAGCGTTACTTCATCTC 1224921 Query 229899 ACACATCCTAGGTTTTTTCGCAGGCTCCGATGGTATTGT 229937 ||| |||| | || ||||| | |||||||| ||||| Sbjct 1224920 CCACGTCCTCGCATTCTTCGCTGCATCCGATGGAATTGT 1224882 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057823037710730