Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialocephala_20scopiformis_20[genbank_20GCA_5F001500285.1_202016-
01-07] 71 sequences; 48,876,257 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq42 197 2e-45
seq4 109 7e-19
>seq42
Length=298824
Score = 197 bits (218), Expect = 2e-45
Identities = 1305/2070 (63%), Gaps = 59/2070 (3%)
Strand=Plus/Plus
Query 52808 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 52867
|| || || || ||||| || || | | ||||| ||||||||||| || ||||| |||
Sbjct 241572 GTAAACTGGATAGGAGCTGAAGCAGCCATGGTACGGAGATAGTACATGCCAGTTTTCAGA 241631
Query 52868 CCGAGACTCCATCCGTAAAAATGCATACTTGTTAGTTTGGAATAACTCGGATCTGCTATA 52927
|| | |||| || || |||||||| || | ||| | ||||| ||
Sbjct 241632 CCCAACTTCCAGCCAGCGAAGTGCATACTGGTGATCTTGCCCATTGTGGGATCCTTCATG 241691
Query 52928 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 52987
|| || ||||| ||||| ||| || ||| | || || | ||| || ||||||| | |
Sbjct 241692 TGAATGTTCATCGATTGTGATTGGTCAATGTAAGCACCACGGTCAGCGGCCATTTGGACG 241751
Query 52988 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 53047
|| || |||| |||||||||| || || |||| ||| ||||| |||| | |
Sbjct 241752 ATGGTTCGCTGTGAGATTTCCCAAACGGTCTTGTAAAGAGCCTTGATATCAGCTGGGATG 241811
Query 53048 TTTG---TATTCTGAATAGATCCACCATCTACCATAATCCTATTCTTGATCTCATCATTC 53104
|| | | |||||||| ||||||||||| | || || | ||||| || | ||| |
Sbjct 241812 TTGGGGATGTTCTGAATCGATCCACCATCGGCAATGATACGGTTCTTCATGTTGTCAGAC 241871
Query 53105 CATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCA 53164
|| | | || | | | | || | || || || ||||| || || |||
Sbjct 241872 CAGAGACCCATGTCAACAAGATCCTTGAGCAACCATGGGTTGACGACTTGGAACTCGCCA 241931
Query 53165 GACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATTTCCC 53224
| | || | |||| ||| || || ||||| || || | ||||||| ||
Sbjct 241932 GCAAGAACACGACGAGAGTAGATGTTGGACGTATATGGCTCAAAGCACTCATTGAAGCCA 241991
Query 53225 AAAATTTGAGCAGTTGATG-CAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACC 53283
| ||||||| | | || || |||| |||||||| || || | || ||||| | ||||||
Sbjct 241992 AGAATTTGA-CTGGTGCTGGCAGTTGGCATAGGAGCGACAAGCAAGCTATTGCGAAGACC 242050
Query 53284 GTATGTTC--TGATTTTATCTTTTAGAGGT-TCCCAATTCCAAAGATCCGACGGTACAAC 53340
||||| ||||||| | || | || | ||||||| ||| ||||| | || |||
Sbjct 242051 --ATGTTGCTTGATTTTCTGCTTCA-AGCTGTCCCAATCCCAGAGATCTGTTGGAGTAAC 242107
Query 53341 NNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTATCGTA 53400
|| | || || ||| || || || |||| || ||
Sbjct 242108 ACCCCACATATCATACTGCAACTCGCCCTTGGAGGCAGGAGAACCCTCAAATGTCTCATA 242167
Query 53401 TGGTCCTTCCTTCTCAGCTAGTTCACAACTC--GCCTCTAATGCACCGTAATAAATGGTT 53458
| || || || || || ||| ||| || | ||| | | || |||||
Sbjct 242168 AGTGCCATCAACCTTGGCAAGCTCA--ACTGAAGCAGTGAGTGCGGCATGGTAGATGGTC 242225
Query 53459 TCGAAGATCTTCTTATTTAGAT-CTTGTGCTTCCAGGCTATCAAATGGATAATTTAAGAG 53517
|||||||| | | || || | |||| || || | || |||||| | |||||
Sbjct 242226 TCGAAGATTTGAATGTTGAGGTGCTTG-GCCTCTGGAGAGTCGAATGGAAGACG-AAGAG 242283
Query 53518 --AATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTA 53575
|| ||| || || || | || || ||||||| ||||||||| || | ||
Sbjct 242284 CCAAGAAA-GCATCAGCAAGACCCTGGACACCAACGGCGATAGGTCGGTGGCGGAAGTTG 242342
Query 53576 GAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGGTTTCTG 53635
| | ||||| |||| ||| ||||| || | ||| || || || || | ||| ||
Sbjct 242343 CTTCTCTTGGCTTCGGGAACAGGGTAATAGTTGACATCAATGATCTTGTTCAAGTTCTTG 242402
Query 53636 ACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAA-------TTGTCCATCTAT 53688
|||| |||| | || || | ||| | | || ||| | |||| ||| |
Sbjct 242403 ACAACGACTTGGCAGACTTCGTGAAGTCTCTGGAAGTCATAAGTGCCGTTGTTCATGTCG 242462
Query 53689 TACAAACATGTTCAATGCAATAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGC 53748
||| | | | |||| || |||| || || ||||| ||||||| | | |
Sbjct 242463 -ACATAGGTAGGAAGGGCAAGTGAAGCCAAGTTGCAGACGGCAACCTCATCTGGAGCACA 242521
Query 53749 ATATTGTATTATCTCAGTGCAAAGATTACTACACTT--GATGGTTCCTAAATTTTGTTGA 53806
|| | | ||||||||||| || || | | ||| |||||| || | ||| | ||
Sbjct 242522 GTACTCAACAATCTCAGTGCAGAGGTT-CGAG-CTTCGGATGGTACCGAGATTCTTCTGG 242579
Query 53807 TTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGCGTACCAGTTTCAATCTGG 53866
|| |||||| |||| || |||||||| ||||| ||||| || | ||||| || ||||
Sbjct 242580 TTGCTCTTTCTGTTGCAAGCATCCTTGTAAAGCATGAAGGGATTGCCAGTCTCGGTCTGA 242639
Query 53867 GATTCTATAATCGCTTTCCAGACGACACGAGCCTTTATTATAGATTTGTATCTCTT---T 53923
| || | || | | ||||| | ||||| || | ||| | ||| |
Sbjct 242640 GCCTCCAGGATGGAGTACCAGAGCTTTTGCGCCTTGATGGTC---TTGCGACCCTTACCT 242696
Query 53924 TCTCTTTCGTATAGT--GTATACAATCGTTCAAACTCGTCTCCCCAAACATTGTCCAATC 53981
|| | || || | ||| | | | || || || || || | |||| |||| |
Sbjct 242697 TCGCGCTCATACTGCTCGTAGAGAGCC--TCGAATTCATCGCCATAGACATCAGCCAAGC 242754
Query 53982 CAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAA 54041
| || || |||| || |||||||| | |||||| || | | | ||||| ||||| |
Sbjct 242755 CTGGGCACTCATTGGGGCACATCAAAGTCCACTCGCCATTCTTTTCAACTCGCTTCATGA 242814
Query 54042 AGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTG 54101
| |||||||||||||| || || || ||||| | | || ||||| || ||
Sbjct 242815 AAAGATCAGGAATCCACAGGGCGTAGAAGAGATCACGAGCTCGGACCTCCTCCTTGCCGT 242874
Query 54102 TATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGG 54161
||||||| |||||| ||| || | | | ||| | ||||| || || | || || |
Sbjct 242875 GATTCTTTCGAAGATCAAGGTACTCGAAGACATCGGCGTGCCATGGCTCAAGATAGATAG 242934
Query 54162 TCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAA 54221
| | | || || || ||||| || || || || | ||| | ||| ||||| || | |
Sbjct 242935 CGAAAGCACCTGGTCGCTTGTTACCACCTTGGTCAACGTAACGAGCAGTGTTGTTGAAGA 242994
Query 54222 CTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCAC 54281
||| | ||| || | || || || || |||||| || || | || ||| |||
Sbjct 242995 CTCGGAGCATGGGGACGATGCCGTTCGAGTTACCATTTGTTCCTGCAATGTAGGCTCCGG 243054
Query 54282 TGGCACGAATATTACTAA--TTGATAGACCTATCCCCCCTGCCATTTTAGAGATTAATGC 54339
| || || || | || ||| || || || || || || | || || || | ||
Sbjct 243055 TAGCGCGGATTCGATGAACGTTG--AGGCCAATTCCACCAGCATTCTTGGAAATCATGGC 243112
Query 54340 GCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAA 54399
||| || || || || ||||| || || ||||| || ||| |||||| | || ||
Sbjct 243113 GCAAGTCTTCAATGTGTCGTAGATACCGTCGATACTGTCCTCCTTCATGTCGACAAGGAA 243172
Query 54400 ACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGT 54459
||| ||| | |||| | ||| || ||| || | || || ||||| |||||
Sbjct 243173 ACATGAAGAGAGTTGGGCTTGTGGAGTACCAGCAGCGAAGAGAGTTGGGGAAGCATGCGT 243232
Query 54460 AAACCATTTTTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCTATATC-CCATTGAT 54518
|| || || | || | |||||||| ||||| || || | || ||||| || | |
Sbjct 243233 GAAGCACTTCTGGGACATCAGATTGTATGTCTCAATCGCAGCCTCGATATCTTCACCG-T 243291
Query 54519 GAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTA 54578
|||| || ||||| || ||||| | |||||| || || | ||| ||||||| || |
Sbjct 243292 GAATGCCGACTGCTACTCGCATAATCATGTGTTGTGGGCGTTCGCAGATCTTGCCATTGA 243351
Query 54579 TTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTC 54636
|| | ||| ||| || | ||| || || ||||| || | ||| ||||| ||
Sbjct 243352 GGCGGAGGAGGTATGATCGCTCGAGAGTCTTGAAGCCAAAGTATTGGTAATTGAAA--TC 243409
Query 54637 TCGTTCGTAAATAATAACTGAGTTGAGTTTATCCTTATATTTGTTAAC-TACATCCATG- 54694
||| ||||| | |||| | || || |||| ||| | ||| |||| || | |||
Sbjct 243410 TCGGTCGTAGACAATAGCGGAATTAAGTTCTGCCTCGTGCTTGATAACACACTTGTATGT 243469
Query 54695 GTAATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTGACATAGTTAAATAAA 54754
| | || || || |||||| | || ||||| ||||||||| ||||| | |
Sbjct 243470 GGCCTCGCTG--ATCATAGGAGAAAGCTTGCCATTCCGAGGATTGACGTAGTTGTAGAGG 243527
Query 54755 TCCTTCATCAC-TTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTAT 54813
|| ||||| || || | | || || || | ||||| || || || || || ||
Sbjct 243528 TCTGATATCACAGTCGAGAACT-GCTTCTTGGTCTGCTTGTGGAGGTTGGAGACTGCAAT 243586
Query 54814 TCTAGCGGCTAGAATGGCATAATCCGGATG 54843
|| || || || |||||||| || |||||
Sbjct 243587 TCGTGCAGCGAGGATGGCATAGTCGGGATG 243616
>seq4
Length=1888314
Score = 109 bits (120), Expect = 7e-19
Identities = 337/516 (65%), Gaps = 9/516 (2%)
Strand=Plus/Plus
Query 23843 TTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATT 23902
||||||||| ||||| || || || || || || ||||| || || | | || || ||
Sbjct 1224140 TTTTTGGTAGTCACCAACGCGCTTCTCAAAGAAGTTAGTCTTGCCAGCGAGCGAGATGTT 1224199
Query 23903 TTCCATGAAATCGGATGGATTGGTAACATTATAGATTCTTTTAAATCCCAATT-CAGAAA 23961
||||| || || |||| |||| | || |||| ||| | | | || | || ||
Sbjct 1224200 CTCCATAAAGTCAAATGGGTTGGCAGACTTGTAGAC-CTTCTCATTGCCGAGGGCAAGAA 1224258
Query 23962 TCAATCTATCTGCGACAAACTCCATATATGTTTTCATCATTTCACAATTCATTCCTATAA 24021
|| | ||| ||||| ||||| || ||| ||||||| | | ||||| || | |
Sbjct 1224259 GCAGACGATCAGCGACGAACTCGATGTATTGCTTCATCAGATTCGAGTTCATGCCAAGGA 1224318
Query 24022 GTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAA 24081
|| | ||||||||| |||| | || ||||| ||||| ||| || || || || |
Sbjct 1224319 GTGCACAAGGAAGAGCCTCAGTCAAGAACTCTTGCTCAATCTCGACAGCTTCGGTAATGA 1224378
Query 24082 TAGATCTT--ACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGC 24139
|||| || | || | || || | | | || || || | | || ||
Sbjct 1224379 CG--TCTTGGACAGCTTGCTTGCTTGGGCGGTGCTTCAAGTGAGAGAAGAGAAGGCAAGC 1224436
Query 24140 GAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGG 24199
|| ||| ||| ||||||||||| | | || | ||| ||||| || || || || |
Sbjct 1224437 AAAGTCGGTGTGGAGACCCTCGTCACGAGAGATGAGTTCATTGGAGAAGGTAAGACCAGC 1224496
Query 24200 CATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCC 24259
||| || |||||||| || | ||| || |||||||| || || ||| ||||| || ||
Sbjct 1224497 CATAAGACCACGCTTCTTCAACCAGAAGATGGACGCGAAGGAACCACTGAAGAAGATACC 1224556
Query 24260 TTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATA---ACCGGCGCTGTCATGTATCCA 24316
|| || || || || || | || | || || | | | |||| || |||||
Sbjct 1224557 CTCGACGGCGGCGAATGCGACGAGACGTTGAGCAAATGTAGAGTTCTTGTCTTGAATCCA 1224616
Query 24317 CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGG 24352
||| |||||| ||||||||||| || | ||| ||
Sbjct 1224617 CTTGACAGCCCAGTCGGCCTTCTTCTTGATACATGG 1224652
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593721073072080
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