Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialocephala_20scopiformis_20[genbank_20GCA_5F001500285.1_202016-
01-07] 71 sequences; 48,876,257 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq4 111 1e-19
seq16 91.5 1e-13
>seq4
Length=1888314
Score = 111 bits (122), Expect = 1e-19
Identities = 150/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
||||| |||| || ||||| ||||| ||||||||||| |||| || ||| ||||||
Sbjct 715906 ACCAAATGGAGAGTCGACTCCTTTTGGATGTTGTAATCACTCAGTGTACGCCCATCCTCC 715965
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
| || || ||||| |||| | |||||||| ||||| || || ||||||||||||
Sbjct 715966 AATTGCTTACCAGCAAAGATCAATCGCTGCTGGTCGGGTGGGATACCCTCCTTGTCTTGG 716025
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709
|| || || || | || | |||||||| ||| || || | || | || ||
Sbjct 716026 ATCTTCGACTTGACATTGTCAATGGTGTCCGAAGACTCCACTTCCAATGTAATGGTCTTT 716085
Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
||||||| ||| || ||||| || |||||
Sbjct 716086 CCGGTCAAAGTCTTGACAAAGATTTGCAT 716114
Score = 111 bits (122), Expect = 1e-19
Identities = 150/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
||||| || | || ||||| ||||||||||||||||| || |||||| || ||
Sbjct 716134 ACCAAATGAAGAGTCGACTCCTTTTGAATGTTGTAATCTGACAAAGTGCGGCCGTCTTCA 716193
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
|| || || |||||| |||| || | |||||| ||||| || ||||||||||| || |
Sbjct 716194 AGTTGCTTACCAGCGAAGATAAGTCTCTGCTGGTCGGGTGGGATGCCCTCCTTATCCTGA 716253
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709
|| || || || | |||| |||||||| || ||||| | || | || ||
Sbjct 716254 ATCTTGGACTTGACATTGTCGATGGTGTCCGAAGATTCAACCTCCAGAGTGATAGTCTTT 716313
Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| |||| ||| || ||||| ||||||||
Sbjct 716314 CCAGTCAAAGTCTTAACAAAGATCTGCAT 716342
Score = 89.7 bits (98), Expect = 4e-13
Identities = 127/179 (71%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 118536 TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGT 118595
|||| |||||||| || |||||||| ||||| | ||||| ||||| |||||
Sbjct 716652 TGGAGGGTAGACTCCTTCTGAATGTTATAATCAGAAAGGGTGCGACCGTCCTCAAGCTGC 716711
Query 118596 TTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTT 118655
||||||||| |||| | || || || ||||| || || |||||||||||| ||| ||
Sbjct 716712 TTTCCAGCGAAGATCAAGCGTTGTTGGTCGGGTGGGATTCCCTCCTTGTCTTGAATCTTG 716771
Query 118656 TGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714
|| || | |||| ||| |||| | ||| ||||| | || | || || |||||
Sbjct 716772 CTCTTGACGTTATCGATGGTATCCGAGGACTCAACCTCAAGAGTGATGGTCTTTCCGGT 716830
>seq16
Length=1327714
Score = 91.5 bits (100), Expect = 1e-13
Identities = 133/188 (71%), Gaps = 0/188 (0%)
Strand=Plus/Plus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601
|| ||||| || || |||||||||||| | |||||| ||||||||| || || |||
Sbjct 332110 GTCGACTCCTTCTGGATGTTGTAATCGGAGAGAGTGCGGCCATCCTCGAGTTGCTTGCCA 332169
Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661
||| |||| || || || || ||||| || || || ||||||||| ||||| ||
Sbjct 332170 GCGAAGATCAGGCGTTGTTGGTCGGGTGGAATTCCTTCCTTGTCTTGGATTTTGGACTTG 332229
Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721
|| | |||| ||| || | ||| ||||||| || | || ||||| || || ||
Sbjct 332230 ACATTGTCGATGGTATCGGAAGACTCCACCTCGAGTGTGATAGTCTTGCCCGTGAGGGTC 332289
Query 118722 TTTACAAA 118729
|| || ||
Sbjct 332290 TTGACGAA 332297
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433830024601132
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |