Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialocephala_20scopiformis_20[genbank_20GCA_5F001500285.1_202016-
01-07] 71 sequences; 48,876,257 total letters
Query= NC_002686.2
Length=124784
Score E
Sequences producing significant alignments: (Bits) Value
seq13 100 2e-16
>seq13
Length=1427021
Score = 100 bits (110), Expect = 2e-16
Identities = 316/481 (66%), Gaps = 39/481 (8%)
Strand=Plus/Minus
Query 20218 GGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGTTGAC 20277
|| || ||||| ||||| ||||| || |||||| ||||||||||||| || ||||| ||
Sbjct 1237602 GGTGACTTGGGACCTGTCTATGGTTTCCAATGGCGACATTTTGGAGCGGAGTATGTCGAT 1237543
Query 20278 ATGAACACAAATTATTTTGGACAAGGAGTAGATCAA-TTACAAAATGTTATTAATTTAAT 20336
| | || ||||| || |||| || || ||| || || || |||||| | |
Sbjct 1237542 GCGCAAACGGATTATACAGGGAAAGGCGTGGACCAACTTGCAGAA-GTTATTCACA-AGC 1237485
Query 20337 TAAAACG-AACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGATGTGC 20395
|||| | || || | || || |||| ||| | |||| ||||| | || || ||
Sbjct 1237484 TAAAGCATAATCCTTATGATCGACGAATCATTCTCAGCGCATGGAATCCAAAGGACCTGA 1237425
Query 20396 CTTTAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTT-----------GC 20444
| |||||| | |||||||| |||||| | |||||| || || ||
Sbjct 1237424 AACTTATGGCTCTACCTCCATGCCATATGTTCGCCCAATTCTATGTCTCATACCCGAAGC 1237365
Query 20445 TA----AT-------------AATGAATTGTCG--TGTCAAATGTATCAACG-ATCCGCT 20484
|| || || ||| | | ||||| | ||||| || | ||
Sbjct 1237364 TAGAAAATGGAGAGAAGGGGCAAGGAAGACTTGATTGTCAGCTCTATCAGCGCAGTTGC- 1237306
Query 20485 GATATGGGACTGGGTGTTCCTTTCAATATTGCAAGTTATGCGCTGCTTACGTATATGATT 20544
|| |||||||| ||||||||||||||||||||||| ||||| || | ||| ||||| |
Sbjct 1237305 GACATGGGACTTGGTGTTCCTTTCAATATTGCAAGCTATGCTTTGTTGACGCATATGTTG 1237246
Query 20545 GCACATGTTACAGATTTAAAAACGGGTGACTTAGTC-CACACCATAGGAGACGCGCATAT 20603
||||||||| | || | | | || ||||| | || || || ||||| || ||| |
Sbjct 1237245 GCACATGTTTGCAACTTGATACCTGG-GACTTTCACGCATACTATGGGAGATGCACATGT 1237187
Query 20604 TTACCTTAATCATATAGAACCTTTAAAATTACAGTTAACACGACAACC-AAAACAATTCC 20662
||| | ||||| |||| || | || | ||||| || || |||| | | || ||||
Sbjct 1237186 CTACATCGATCATGTAGATGCTCTCAAGGTCCAGTTGACCAGAGAACCTAGATCATTTCC 1237127
Query 20663 C 20663
|
Sbjct 1237126 C 1237126
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 399183654581095
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |