Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialocephala_20scopiformis_20[genbank_20GCA_5F001500285.1_202016- 01-07] 71 sequences; 48,876,257 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq13 100 2e-16 >seq13 Length=1427021 Score = 100 bits (110), Expect = 2e-16 Identities = 316/481 (66%), Gaps = 39/481 (8%) Strand=Plus/Minus Query 20218 GGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGTTGAC 20277 || || ||||| ||||| ||||| || |||||| ||||||||||||| || ||||| || Sbjct 1237602 GGTGACTTGGGACCTGTCTATGGTTTCCAATGGCGACATTTTGGAGCGGAGTATGTCGAT 1237543 Query 20278 ATGAACACAAATTATTTTGGACAAGGAGTAGATCAA-TTACAAAATGTTATTAATTTAAT 20336 | | || ||||| || |||| || || ||| || || || |||||| | | Sbjct 1237542 GCGCAAACGGATTATACAGGGAAAGGCGTGGACCAACTTGCAGAA-GTTATTCACA-AGC 1237485 Query 20337 TAAAACG-AACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGATGTGC 20395 |||| | || || | || || |||| ||| | |||| ||||| | || || || Sbjct 1237484 TAAAGCATAATCCTTATGATCGACGAATCATTCTCAGCGCATGGAATCCAAAGGACCTGA 1237425 Query 20396 CTTTAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTT-----------GC 20444 | |||||| | |||||||| |||||| | |||||| || || || Sbjct 1237424 AACTTATGGCTCTACCTCCATGCCATATGTTCGCCCAATTCTATGTCTCATACCCGAAGC 1237365 Query 20445 TA----AT-------------AATGAATTGTCG--TGTCAAATGTATCAACG-ATCCGCT 20484 || || || ||| | | ||||| | ||||| || | || Sbjct 1237364 TAGAAAATGGAGAGAAGGGGCAAGGAAGACTTGATTGTCAGCTCTATCAGCGCAGTTGC- 1237306 Query 20485 GATATGGGACTGGGTGTTCCTTTCAATATTGCAAGTTATGCGCTGCTTACGTATATGATT 20544 || |||||||| ||||||||||||||||||||||| ||||| || | ||| ||||| | Sbjct 1237305 GACATGGGACTTGGTGTTCCTTTCAATATTGCAAGCTATGCTTTGTTGACGCATATGTTG 1237246 Query 20545 GCACATGTTACAGATTTAAAAACGGGTGACTTAGTC-CACACCATAGGAGACGCGCATAT 20603 ||||||||| | || | | | || ||||| | || || || ||||| || ||| | Sbjct 1237245 GCACATGTTTGCAACTTGATACCTGG-GACTTTCACGCATACTATGGGAGATGCACATGT 1237187 Query 20604 TTACCTTAATCATATAGAACCTTTAAAATTACAGTTAACACGACAACC-AAAACAATTCC 20662 ||| | ||||| |||| || | || | ||||| || || |||| | | || |||| Sbjct 1237186 CTACATCGATCATGTAGATGCTCTCAAGGTCCAGTTGACCAGAGAACCTAGATCATTTCC 1237127 Query 20663 C 20663 | Sbjct 1237126 C 1237126 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399183654581095