Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialocephala_20scopiformis_20[genbank_20GCA_5F001500285.1_202016-
01-07] 71 sequences; 48,876,257 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq4 132 1e-25
seq42 111 3e-19
>seq4
Length=1888314
Score = 132 bits (146), Expect = 1e-25
Identities = 164/224 (73%), Gaps = 3/224 (1%)
Strand=Plus/Minus
Query 101852 ATCAAGAAGAAGGAGCAGTGGGCTATTAATTGGATGCAAAGCAATAACGAT---TTGGCG 101908
||||||||||||| | |||||| | || ||||| ||| ||| ||| | || ||
Sbjct 1224646 ATCAAGAAGAAGGCCGACTGGGCTGTCAAGTGGATTCAAGACAAGAACTCTACATTTGCT 1224587
Query 101909 GAACTAATTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCC 101968
||| | || || || || || || || || |||||||| |||||| | ||||| |||
Sbjct 1224586 CAACGTCTCGTCGCATTCGCCGCCGTCGAGGGTATCTTCTTCAGTGGTTCCTTCGCGTCC 1224527
Query 101969 ATTTTCTGGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATT 102028
|| |||||| | ||||| | ||| || || ||||||| |||| ||||||||| ||||
Sbjct 1224526 ATCTTCTGGTTGAAGAAGCGTGGTCTTATGGCTGGTCTTACCTTCTCCAATGAACTCATC 1224467
Query 102029 TCTAGGGACGAAGGTCTTCATCGCGACTTTGCATGCATGCTGTT 102072
||| | ||||| ||||| || ||||||||| ||| | || ||
Sbjct 1224466 TCTCGTGACGAGGGTCTCCACACCGACTTTGCTTGCCTTCTCTT 1224423
>seq42
Length=298824
Score = 111 bits (122), Expect = 3e-19
Identities = 187/268 (70%), Gaps = 2/268 (1%)
Strand=Plus/Plus
Query 94773 ATGAAAGTGGATGCCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGT 94832
||||| || || ||| | ||| |||||| ||||||| || || || ||| | ||
Sbjct 243068 ATGAACGTTGAGGCCAATTCCACCAGCATTCTTGGAAATCATGGCGCAAGTCTTCAATGT 243127
Query 94833 ATCATAAATACCCTCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTG 94892
|| || ||||| || || || || || | | | | | |||||| || || || |||||
Sbjct 243128 GTCGTAGATACCGTCGATACTGTCCTCCTTCATGTCGACAAGGAAACATGAAGAGAGTTG 243187
Query 94893 GGGT-GTGACTGTTCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCG 94951
|| | ||| || ||| | || || || ||||||||||| || || | | | |
Sbjct 243188 GGCTTGTGGA-GTACCAGCAGCGAAGAGAGTTGGGGAAGCATGCGTGAAGCACTTCTGGG 243246
Query 94952 ACATGAGATCATATGTTTCAATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCA 95011
|||| |||| ||||| ||||| ||| | ||| ||| |||||||||||||| || |
Sbjct 243247 ACATCAGATTGTATGTCTCAATCGCAGCCTCGATATCTTCACCGTGAATGCCGACTGCTA 243306
Query 95012 CACGCATAATCATGTCCTGAGGGCGCTC 95039
| ||||||||||||| || ||||| ||
Sbjct 243307 CTCGCATAATCATGTGTTGTGGGCGTTC 243334
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989583099787805
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |