Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialocephala_20scopiformis_20[genbank_20GCA_5F001500285.1_202016- 01-07] 71 sequences; 48,876,257 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq4 132 1e-25 seq42 111 3e-19 >seq4 Length=1888314 Score = 132 bits (146), Expect = 1e-25 Identities = 164/224 (73%), Gaps = 3/224 (1%) Strand=Plus/Minus Query 101852 ATCAAGAAGAAGGAGCAGTGGGCTATTAATTGGATGCAAAGCAATAACGAT---TTGGCG 101908 ||||||||||||| | |||||| | || ||||| ||| ||| ||| | || || Sbjct 1224646 ATCAAGAAGAAGGCCGACTGGGCTGTCAAGTGGATTCAAGACAAGAACTCTACATTTGCT 1224587 Query 101909 GAACTAATTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCC 101968 ||| | || || || || || || || || |||||||| |||||| | ||||| ||| Sbjct 1224586 CAACGTCTCGTCGCATTCGCCGCCGTCGAGGGTATCTTCTTCAGTGGTTCCTTCGCGTCC 1224527 Query 101969 ATTTTCTGGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATT 102028 || |||||| | ||||| | ||| || || ||||||| |||| ||||||||| |||| Sbjct 1224526 ATCTTCTGGTTGAAGAAGCGTGGTCTTATGGCTGGTCTTACCTTCTCCAATGAACTCATC 1224467 Query 102029 TCTAGGGACGAAGGTCTTCATCGCGACTTTGCATGCATGCTGTT 102072 ||| | ||||| ||||| || ||||||||| ||| | || || Sbjct 1224466 TCTCGTGACGAGGGTCTCCACACCGACTTTGCTTGCCTTCTCTT 1224423 >seq42 Length=298824 Score = 111 bits (122), Expect = 3e-19 Identities = 187/268 (70%), Gaps = 2/268 (1%) Strand=Plus/Plus Query 94773 ATGAAAGTGGATGCCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGT 94832 ||||| || || ||| | ||| |||||| ||||||| || || || ||| | || Sbjct 243068 ATGAACGTTGAGGCCAATTCCACCAGCATTCTTGGAAATCATGGCGCAAGTCTTCAATGT 243127 Query 94833 ATCATAAATACCCTCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTG 94892 || || ||||| || || || || || | | | | | |||||| || || || ||||| Sbjct 243128 GTCGTAGATACCGTCGATACTGTCCTCCTTCATGTCGACAAGGAAACATGAAGAGAGTTG 243187 Query 94893 GGGT-GTGACTGTTCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCG 94951 || | ||| || ||| | || || || ||||||||||| || || | | | | Sbjct 243188 GGCTTGTGGA-GTACCAGCAGCGAAGAGAGTTGGGGAAGCATGCGTGAAGCACTTCTGGG 243246 Query 94952 ACATGAGATCATATGTTTCAATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCA 95011 |||| |||| ||||| ||||| ||| | ||| ||| |||||||||||||| || | Sbjct 243247 ACATCAGATTGTATGTCTCAATCGCAGCCTCGATATCTTCACCGTGAATGCCGACTGCTA 243306 Query 95012 CACGCATAATCATGTCCTGAGGGCGCTC 95039 | ||||||||||||| || ||||| || Sbjct 243307 CTCGCATAATCATGTGTTGTGGGCGTTC 243334 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989583099787805