Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialocephala_20scopiformis_20[genbank_20GCA_5F001500285.1_202016-
01-07] 71 sequences; 48,876,257 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq42 237 2e-57
>seq42
Length=298824
Score = 237 bits (262), Expect = 2e-57
Identities = 1316/2068 (64%), Gaps = 55/2068 (3%)
Strand=Plus/Plus
Query 62046 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 62105
|| || || || ||||| || || | | ||||| ||||||||||| || ||||| |||
Sbjct 241572 GTAAACTGGATAGGAGCTGAAGCAGCCATGGTACGGAGATAGTACATGCCAGTTTTCAGA 241631
Query 62106 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 62165
|| | |||| || || |||||||| || | ||| | ||||| ||
Sbjct 241632 CCCAACTTCCAGCCAGCGAAGTGCATACTGGTGATCTTGCCCATTGTGGGATCCTTCATG 241691
Query 62166 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 62225
|| || ||||| ||||| ||| || ||| | || || | ||| || ||||||| | |
Sbjct 241692 TGAATGTTCATCGATTGTGATTGGTCAATGTAAGCACCACGGTCAGCGGCCATTTGGACG 241751
Query 62226 ATCGTCTTTTGTGCAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 62285
|| || |||| |||||||||| || || |||| ||| ||||| |||| | |
Sbjct 241752 ATGGTTCGCTGTGAGATTTCCCAAACGGTCTTGTAAAGAGCCTTGATATCAGCTGGGATG 241811
Query 62286 TTTG---TATTCTGAATGGATCCACCATCTACCATAATCCTATTCTTGATCTCATCATTC 62342
|| | | |||||||| ||||||||||| | || || | ||||| || | ||| |
Sbjct 241812 TTGGGGATGTTCTGAATCGATCCACCATCGGCAATGATACGGTTCTTCATGTTGTCAGAC 241871
Query 62343 CATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGGTTAACTACTTGGAATTCTCCA 62402
|| | | || | | | | || | ||||| || |||||||| || |||
Sbjct 241872 CAGAGACCCATGTCAACAAGATCCTTGAGCAACCATGGGTTGACGACTTGGAACTCGCCA 241931
Query 62403 GACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATTATTTCCC 62462
| | || | |||| ||| || || ||||| || || | ||||||| ||
Sbjct 241932 GCAAGAACACGACGAGAGTAGATGTTGGACGTATATGGCTCAAAGCACTCATTGAAGCCA 241991
Query 62463 AAAATTTGAGCAGTTGATG-CAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACC 62521
| ||||||| | | || || |||| |||||||| || || | || ||||| | ||||||
Sbjct 241992 AGAATTTGA-CTGGTGCTGGCAGTTGGCATAGGAGCGACAAGCAAGCTATTGCGAAGACC 242050
Query 62522 GTATGTTC--TGATTTTAT-CTTTTAGATGTTCCCAATTCCAAAGATCCGACGGTACAAC 62578
||||| ||||||| | ||| || ||| |||||| ||| ||||| | || |||
Sbjct 242051 --ATGTTGCTTGATTTTCTGCTTCAAGCTGT-CCCAATCCCAGAGATCTGTTGGAGTAAC 242107
Query 62579 ANNNNNNNNNNNATATTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTATCATA 62638
| ||| || | || || ||| || || || |||| |||||
Sbjct 242108 ACCCCACATATCATACTGCAACTCGCCCTTGGAGGCAGGAGAACCCTCAAATGTCTCATA 242167
Query 62639 TGGTCCTTCCTTCTCAGCTAGTTTACAACTC--GCCTCTAATGCACCGTAATAAATGGTT 62696
| || || || || || | ||||| || | ||| | | || |||||
Sbjct 242168 AGTGCCATCAACCTTGGCAAGCT--CAACTGAAGCAGTGAGTGCGGCATGGTAGATGGTC 242225
Query 62697 TCAAAGATCTTCTTATTTAGAT-CTTGTGCTTCCGGGCTATCAAATGGATAATTTAAGAG 62755
|| ||||| | | || || | |||| || || || || |||||| | |||||
Sbjct 242226 TCGAAGATTTGAATGTTGAGGTGCTTG-GCCTCTGGAGAGTCGAATGGAAGACG-AAGAG 242283
Query 62756 --AATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTA 62813
|| ||| || || || | || || ||||||| ||||||||| || | ||
Sbjct 242284 CCAAGAAA-GCATCAGCAAGACCCTGGACACCAACGGCGATAGGTCGGTGGCGGAAGTTG 242342
Query 62814 GAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTG 62873
| | ||||| |||| ||| ||||| || | ||| || || || || | || ||
Sbjct 242343 CTTCTCTTGGCTTCGGGAACAGGGTAATAGTTGACATCAATGATCTTGTTCAAGTTCTTG 242402
Query 62874 ACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCA-AATCGCCCATCT--ATTACA 62930
|||| |||| | || || | ||| | | || ||| || ||| | | || |
Sbjct 242403 ACAACGACTTGGCAGACTTCGTGAAGTCTCTGGAAGTCATAAGTGCCGTTGTTCATGTCG 242462
Query 62931 A-ACATGTTCAATG--CAACAGATGCCAGATTACACACGGCTACCTCATTAGCATCCGCA 62987
| | | || | | ||| || |||| || || ||||| ||||||| | | |
Sbjct 242463 ACATAGGTAGGAAGGGCAAGTGAAGCCAAGTTGCAGACGGCAACCTCATCTGGAGCACAG 242522
Query 62988 TATTGTATTATCTCAGTGCAAAGATTACTACACTT--GATAGTTCCTAAATTTTGTTGAT 63045
|| | | ||||||||||| || || | | ||| ||| || || | ||| | || |
Sbjct 242523 TACTCAACAATCTCAGTGCAGAGGTT-CGAG-CTTCGGATGGTACCGAGATTCTTCTGGT 242580
Query 63046 TACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAG 63105
| |||||| |||| || |||||||| ||||| ||||| ||| | ||||| || ||||||
Sbjct 242581 TGCTCTTTCTGTTGCAAGCATCCTTGTAAAGCATGAAGGGATTGCCAGTCTCGGTCTGAG 242640
Query 63106 ATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATC--TCCTTTC 63163
|| | || | | ||||| | | ||||| || | || | | | | |||
Sbjct 242641 CCTCCAGGATGGAGTACCAGAGCTTTTGCGCCTTGATGGTC--TTGCGACCCTTACCTTC 242698
Query 63164 TCTTTCGTATAGA--GTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCTA 63221
| || || | ||| | | | ||||| || || || | |||| |||| |
Sbjct 242699 GCGCTCATACTGCTCGTAGAGAGCC--TCGAATTCATCGCCATAGACATCAGCCAAGCCT 242756
Query 63222 GGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAG 63281
|| || |||| || |||||||| | |||||| || | | | ||||| ||||| ||
Sbjct 242757 GGGCACTCATTGGGGCACATCAAAGTCCACTCGCCATTCTTTTCAACTCGCTTCATGAAA 242816
Query 63282 AGATCAGGAATCCAAAGAGCTATAAATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTA 63341
|||||||||||||| || || || ||||| | | || ||||| || || |
Sbjct 242817 AGATCAGGAATCCACAGGGCGTAGAAGAGATCACGAGCTCGGACCTCCTCCTTGCCGTGA 242876
Query 63342 TTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCC 63401
|||||| |||||| ||| || | | | ||| | ||||| || || | || || ||
Sbjct 242877 TTCTTTCGAAGATCAAGGTACTCGAAGACATCGGCGTGCCATGGCTCAAGATAGATAGCG 242936
Query 63402 ATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACT 63461
| | | || || || ||||| || || || || | ||| | ||| ||||| || | |||
Sbjct 242937 AAAGCACCTGGTCGCTTGTTACCACCTTGGTCAACGTAACGAGCAGTGTTGTTGAAGACT 242996
Query 63462 CTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCCTCCACTG 63521
| | ||| || | || ||||| || ||||||| || || | || ||| |||| |
Sbjct 242997 CGGAGCATGGGGACGATGCCGTTCGAGTTACCATTTGTTCCTGCAATGTAGGCTCCGGTA 243056
Query 63522 GCACGAATATTACTAA--TTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGC 63579
|| || || | || ||| || || ||||| || || | || || || | ||||
Sbjct 243057 GCGCGGATTCGATGAACGTTG--AGGCCAATTCCACCAGCATTCTTGGAAATCATGGCGC 243114
Query 63580 ATCGTTTTAACGTGTCATAGATGCCTTCTATGCTATCATCGATCATGTTAAGTAGAAAAC 63639
| || || ||||| ||||| || || || || || || |||||| | || ||||
Sbjct 243115 AAGTCTTCAATGTGTCGTAGATACCGTCGATACTGTCCTCCTTCATGTCGACAAGGAAAC 243174
Query 63640 AGCTAGACATTTGGTGACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAA 63699
| ||| | |||| | | ||| || ||| || | || || ||||| ||||| |
Sbjct 243175 ATGAAGAGAGTTGGGCTTGTGGAGTACCAGCAGCGAAGAGAGTTGGGGAAGCATGCGTGA 243234
Query 63700 ACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATC-CCATTGATGA 63758
| || || | || | |||||||| |||||||| || | || ||||| || | |||
Sbjct 243235 AGCACTTCTGGGACATCAGATTGTATGTCTCAATCGCAGCCTCGATATCTTCACCG-TGA 243293
Query 63759 ATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATT 63818
|| || ||||| || ||||| | |||||| || || | ||| || ||| || |
Sbjct 243294 ATGCCGACTGCTACTCGCATAATCATGTGTTGTGGGCGTTCGCAGATCTTGCCATTGAGG 243353
Query 63819 TTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTC 63876
| | ||| ||| || | ||| || || ||||| || | ||| ||||| ||||
Sbjct 243354 CGGAGGAGGTATGATCGCTCGAGAGTCTTGAAGCCAAAGTATTGGTAATTGAAA--TCTC 243411
Query 63877 GTTCGTAAATAATAACCGAATTGAGCTTATCCTTATATTTGTTAAC-TATATCCATG-GT 63934
| ||||| | |||| | ||||| || | ||| | ||| |||| | | ||| |
Sbjct 243412 GGTCGTAGACAATAGCGGAATTAAGTTCTGCCTCGTGCTTGATAACACACTTGTATGTGG 243471
Query 63935 AATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATC 63994
| || || || |||||| | || ||||| |||||| || |||||| | | ||
Sbjct 243472 CCTCGCTG--ATCATAGGAGAAAGCTTGCCATTCCGAGGATTGACGTAGTTGTAGAGGTC 243529
Query 63995 CTCCATCAC-TTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATATGGCTATTC 64053
||||| || || | | || || || | |||||| || || || | || ||||
Sbjct 243530 TGATATCACAGTCGAGAACT-GCTTCTTGGTCTGCTTGTGGAGGTTGGAGACTGCAATTC 243588
Query 64054 TGGCGGCTAGAATGGCATAATCCGGATG 64081
|| || || |||||||| || |||||
Sbjct 243589 GTGCAGCGAGGATGGCATAGTCGGGATG 243616
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629817041036880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |