Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialocephala_20scopiformis_20[genbank_20GCA_5F001500285.1_202016-
01-07] 71 sequences; 48,876,257 total letters
Query= NC_003389.1
Length=146454
Score E
Sequences producing significant alignments: (Bits) Value
seq42 86.0 6e-12
>seq42
Length=298824
Score = 86.0 bits (94), Expect = 6e-12
Identities = 376/587 (64%), Gaps = 6/587 (1%)
Strand=Plus/Plus
Query 37966 AATCCTGGACATTCGCATGGACACATTAGAGACCATTCTTCATCTTTTTCTACGCGTTCC 38025
|| ||||| || || || ||||| | || ||| || ||| ||||| || || | |
Sbjct 242751 AAGCCTGGGCACTCATTGGGGCACATCAAAGTCCACTCGCCATTCTTTTCAACTCGCTTC 242810
Query 38026 ATAAATAAATCAGGTACCCATAATGCAGTA-AATAAATCTTTGGTTCTATATTCTTCGTT 38084
|| || | |||||| | ||| | || ||| || | ||| | || || || ||
Sbjct 242811 ATGAAAAGATCAGGAATCCACAGGGC-GTAGAAGAGATCACGAGCTCGGACCTCCTCCTT 242869
Query 38085 CCCTACATTCTTTCTTAAGCTTA-GAAAATCGAATATATCAGCGTGCCATGGTTCTATAT 38143
|| |||||||| ||| | | | | ||||| | ||| ||||||||||| || | ||
Sbjct 242870 GCCGTGATTCTTTCG-AAGATCAAGGTACTCGAAGACATCGGCGTGCCATGGCTCAAGAT 242928
Query 38144 AAATCGACATTGCTCCTGGTCTTTTATCACCTCCCTGATTAATATATCTAACTGTGTTAT 38203
| || | | || ||||||| || | ||| || || | || || | | | ||||| |
Sbjct 242929 AGATAGCGAAAGCACCTGGTCGCTTGTTACCACCTTGGTCAACGTAACGAGCAGTGTTGT 242988
Query 38204 TATATATTCTTAACATAGGTACTATACCATTAGATTTGCCGTTTATACCGGATATATAAG 38263
| | | || | ||| || || || || || || || || ||| | || | || || |
Sbjct 242989 TGAAGACTCGGAGCATGGGGACGATGCCGTTCGAGTTACCATTTGTTCCTGCAATGTAGG 243048
Query 38264 TACCCTTAGCTCGTATATTACTTATCG-ACAATCCTATTCCACCTGCATGTTTTGATATT 38322
|| |||| || || | | | || | || |||||||| |||| || || ||
Sbjct 243049 CTCCGGTAGCGCGGAT-TCGATGAACGTTGAGGCCAATTCCACCAGCATTCTTGGAAATC 243107
Query 38323 AAAGCGCATTGTTTTAACGTATCAAATATACCTTCTATACTGTCATCCTTTATTGGTAGT 38382
| ||||| || || || || | ||||| || |||||||| ||||| || |
Sbjct 243108 ATGGCGCAAGTCTTCAATGTGTCGTAGATACCGTCGATACTGTCCTCCTTCATGTCGACA 243167
Query 38383 ATAAAACAACTAGACATTTGAGGCAATGGAGTTCCGGCGTTAAATAATGTAGGAGATGCA 38442
| ||||| ||| | ||| | |||||| || || || | || || || |||
Sbjct 243168 AGGAAACATGAAGAGAGTTGGGCTTGTGGAGTACCAGCAGCGAAGAGAGTTGGGGAAGCA 243227
Query 38443 TGTATGAACCATTTTTCCGACAAATAATTATATGTTTCTATTACATCATCTATATCACCG 38502
|| |||| || || | |||| ||| ||||| || || || | || ||||| |
Sbjct 243228 TGCGTGAAGCACTTCTGGGACATCAGATTGTATGTCTCAATCGCAGCCTCGATATCTTCA 243287
Query 38503 CCGTGAATACCTAGAGATACCCTCATTAGCATATGTTGTGGTCTTTC 38549
|||||||| || | | ||| | ||| | ||| |||||||| | |||
Sbjct 243288 CCGTGAATGCCGACTGCTACTCGCATAATCATGTGTTGTGGGCGTTC 243334
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 468524384184240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |