Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialocephala_20scopiformis_20[genbank_20GCA_5F001500285.1_202016-
01-07] 71 sequences; 48,876,257 total letters
Query= NC_003391.1
Length=205719
Score E
Sequences producing significant alignments: (Bits) Value
seq42 201 1e-46
>seq42
Length=298824
Score = 201 bits (222), Expect = 1e-46
Identities = 749/1154 (65%), Gaps = 30/1154 (3%)
Strand=Plus/Plus
Query 65736 GCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCA 65795
|||| || |||| || || ||||| ||||||| | | | || | | ||||||
Sbjct 242478 GCAAGTGAAGCCAAGTTGCAGACGGCAACCTCATCTGGAGCACAGTACTCAACAATCTCA 242537
Query 65796 GTGCAAAGATTACTACACTT--GATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTAC 65853
||||| || || | | ||| |||||| || | ||| | || || |||||| |||| |
Sbjct 242538 GTGCAGAGGTT-CGAG-CTTCGGATGGTACCGAGATTCTTCTGGTTGCTCTTTCTGTTGC 242595
Query 65854 ACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTT 65913
| |||||||| ||||| ||||| ||| | ||||| || |||||| || | || | |
Sbjct 242596 AAGCATCCTTGTAAAGCATGAAGGGATTGCCAGTCTCGGTCTGAGCCTCCAGGATGGAGT 242655
Query 65914 TCCAGACGACTCGAGCCTTTATTATAGATTTGTATCTCTT---TTCTCTTTCGTATAGT- 65969
||||| | | ||||| || | ||| | ||| ||| | || || |
Sbjct 242656 ACCAGAGCTTTTGCGCCTTGATGGTC---TTGCGACCCTTACCTTCGCGCTCATACTGCT 242712
Query 65970 -GTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGG 66028
||| | | | ||||| || || || | |||| |||| || || || |||| ||
Sbjct 242713 CGTAGAGAGCC--TCGAATTCATCGCCATAGACATCAGCCAAGCCTGGGCACTCATTGGG 242770
Query 66029 ACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCA 66088
|||||||| | |||||| || | | | ||||| ||||| || ||||||||||||||
Sbjct 242771 GCACATCAAAGTCCACTCGCCATTCTTTTCAACTCGCTTCATGAAAAGATCAGGAATCCA 242830
Query 66089 AAGAGCTATAAATAAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATC 66148
|| || || | ||| | | || ||||| || || ||||||| ||||||
Sbjct 242831 CAGGGCGTAGAAGAGATCACGAGCTCGGACCTCCTCCTTGCCGTGATTCTTTCGAAGATC 242890
Query 66149 GAGGAACGCCATAATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCG 66208
||| || | | | ||| ||||| || || | || || || | | | || || ||
Sbjct 242891 AAGGTACTCGAAGACATCGGCGTGCCATGGCTCAAGATAGATAGCGAAAGCACCTGGTCG 242950
Query 66209 TTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAAT 66268
||||| || || || || | ||| | ||| ||||| || | |||| | ||| || |
Sbjct 242951 CTTGTTACCACCTTGGTCAACGTAACGAGCAGTGTTGTTGAAGACTCGGAGCATGGGGAC 243010
Query 66269 AATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAATATTACT 66328
|| || || || ||||||| || || | || ||| ||| | || || || |
Sbjct 243011 GATGCCGTTCGAGTTACCATTTGTTCCTGCAATGTAGGCTCCGGTAGCGCGGATTCGATG 243070
Query 66329 AA--TTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTA 66386
|| ||| || || ||||| || || | || || || | ||||| || || ||
Sbjct 243071 AACGTTG--AGGCCAATTCCACCAGCATTCTTGGAAATCATGGCGCAAGTCTTCAATGTG 243128
Query 66387 TCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGG 66446
|| ||||| || || ||||| || ||| |||||| | || ||||| ||| | ||||
Sbjct 243129 TCGTAGATACCGTCGATACTGTCCTCCTTCATGTCGACAAGGAAACATGAAGAGAGTTGG 243188
Query 66447 TGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAA 66506
| ||| || ||| || | || || ||||| ||||| || || || | ||
Sbjct 243189 GCTTGTGGAGTACCAGCAGCGAAGAGAGTTGGGGAAGCATGCGTGAAGCACTTCTGGGAC 243248
Query 66507 AGTAGATTGTACGTCTCAATAGCTGAGTCTATATC-CCATTGATGAATTCCTACTGCGAC 66565
| |||||||| |||||||| || | || ||||| || | ||||| || ||||| ||
Sbjct 243249 ATCAGATTGTATGTCTCAATCGCAGCCTCGATATCTTCACCG-TGAATGCCGACTGCTAC 243307
Query 66566 ACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGA 66625
||||| | |||||| || || | ||| ||||||| || | | | ||| ||
Sbjct 243308 TCGCATAATCATGTGTTGTGGGCGTTCGCAGATCTTGCCATTGAGGCGGAGGAGGTATGA 243367
Query 66626 TTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATA 66683
| || | ||| || || ||||| || | ||| ||||| ||||| ||||| | ||||
Sbjct 243368 TCGCTCGAGAGTCTTGAAGCCAAAGTATTGGTAATTGAAA--TCTCGGTCGTAGACAATA 243425
Query 66684 ACCGAGTTGAGTTTATCCTTATATTTGTTAAC-TACATCCATG-GTAATACTTGAAATAA 66741
| || || |||| ||| | ||| |||| || | ||| | | || || |
Sbjct 243426 GCGGAATTAAGTTCTGCCTCGTGCTTGATAACACACTTGTATGTGGCCTCGCTG--ATCA 243483
Query 66742 TCGGAGAATGTTTCCCATTTTTAGGATTGACATAGTTGAATAAATCCTCCATCAC-TTCA 66800
| |||||| | || ||||| ||||||||| |||||| | | || ||||| ||
Sbjct 243484 TAGGAGAAAGCTTGCCATTCCGAGGATTGACGTAGTTGTAGAGGTCTGATATCACAGTCG 243543
Query 66801 CTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTATAATG 66860
|| | | || || || | ||||| || || || || || |||| || || | |||
Sbjct 243544 AGAACT-GCTTCTTGGTCTGCTTGTGGAGGTTGGAGACTGCAATTCGTGCAGCGAGGATG 243602
Query 66861 GCATAATCCGGATG 66874
||||| || |||||
Sbjct 243603 GCATAGTCGGGATG 243616
Score = 114 bits (126), Expect = 2e-20
Identities = 347/528 (66%), Gaps = 11/528 (2%)
Strand=Plus/Plus
Query 64839 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 64898
|| || || || ||||| || || | | ||||| ||||||||||| || ||||| |||
Sbjct 241572 GTAAACTGGATAGGAGCTGAAGCAGCCATGGTACGGAGATAGTACATGCCAGTTTTCAGA 241631
Query 64899 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 64958
|| | |||| || || |||||||| || | ||| | ||||| ||
Sbjct 241632 CCCAACTTCCAGCCAGCGAAGTGCATACTGGTGATCTTGCCCATTGTGGGATCCTTCATG 241691
Query 64959 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 65018
|| || ||||| ||||| ||| || ||| | || || | ||| || ||||||| | |
Sbjct 241692 TGAATGTTCATCGATTGTGATTGGTCAATGTAAGCACCACGGTCAGCGGCCATTTGGACG 241751
Query 65019 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 65078
|| || |||| |||||||||| || || |||| ||| ||||| |||| | |
Sbjct 241752 ATGGTTCGCTGTGAGATTTCCCAAACGGTCTTGTAAAGAGCCTTGATATCAGCTGGGATG 241811
Query 65079 TTTG---TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTC 65135
|| | | |||||||| ||||||||||| || || || | ||||| || | ||| |
Sbjct 241812 TTGGGGATGTTCTGAATCGATCCACCATCGGCAATGATACGGTTCTTCATGTTGTCAGAC 241871
Query 65136 CATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCA 65195
|| | | || | | | | || | || || || ||||| || || |||
Sbjct 241872 CAGAGACCCATGTCAACAAGATCCTTGAGCAACCATGGGTTGACGACTTGGAACTCGCCA 241931
Query 65196 GACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATTTCCC 65255
| | || | |||| ||| || || ||||| || || | ||||||| ||
Sbjct 241932 GCAAGAACACGACGAGAGTAGATGTTGGACGTATATGGCTCAAAGCACTCATTGAAGCCA 241991
Query 65256 AAAATTTGAGCAGTTGAT-GCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACC 65314
| ||||||| | | || | ||||| |||||||| || || | || ||||| | ||||||
Sbjct 241992 AGAATTTGA-CTGGTGCTGGCAGTTGGCATAGGAGCGACAAGCAAGCTATTGCGAAGACC 242050
Query 65315 GTATGTT--CTGATTTTAT-CTTTTAGAGGTTCCCAATTCCAAAGATC 65359
||||| ||||||| | ||| || | ||||||| ||| |||||
Sbjct 242051 --ATGTTGCTTGATTTTCTGCTTCAAGCTG-TCCCAATCCCAGAGATC 242095
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658172215871640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |