Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialocephala_20scopiformis_20[genbank_20GCA_5F001500285.1_202016- 01-07] 71 sequences; 48,876,257 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq4 87.8 2e-12 >seq4 Length=1888314 Score = 87.8 bits (96), Expect = 2e-12 Identities = 160/232 (69%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || ||||| | ||| | ||| || |||| || ||||| ||||||||||| ||||| | Sbjct 716116 CCACCTCGGAGACGAAGAACCAAATGAAGAGTCGACTCCTTTTGAATGTTGTAATCTGAC 716175 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | |||| |||||| || || |||||||| |||| || | ||||| ||||| || Sbjct 716176 AAAGTGCGGCCGTCTTCAAGTTGCTTACCAGCGAAGATAAGTCTCTGCTGGTCGGGTGGG 716235 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 ||||| || || || ||| | || | || | | || | ||||| | | || || Sbjct 716236 ATGCCCTCCTTATC-CTGAATCTTGGACTTGACATTGTCGATGGTGTCCGAAGATTCAAC 716294 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATAGCT 139768 ||| | || | ||||| || ||||| || || || || || |||||| || Sbjct 716295 CTCCAGAGTGATAGTCTTTCCAGTCAAAGTCTTAACAAAGATCTGCATACCT 716346 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496063559743200