Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialocephala_20scopiformis_20[genbank_20GCA_5F001500285.1_202016-
01-07] 71 sequences; 48,876,257 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq42 264 2e-65
>seq42
Length=298824
Score = 264 bits (292), Expect = 2e-65
Identities = 1330/2082 (64%), Gaps = 57/2082 (3%)
Strand=Plus/Plus
Query 70788 TTCCTTGTCCAATGTAAACTGAATGGGAGAGGATGCGGCTTTCGTACGTAGATAGTACAT 70847
||| | ||| | |||||||| || |||| || || || | ||||| |||||||||||
Sbjct 241559 TTCTTGGTCGACAGTAAACTGGATAGGAGCTGAAGCAGCCATGGTACGGAGATAGTACAT 241618
Query 70848 GCCTGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTG-GAATAGC 70906
||| ||||| ||||| | |||| || || |||||||| || | ||| || |
Sbjct 241619 GCCAGTTTTCAGACCCAACTTCCAGCCAGCGAAGTGCATACTGGTGATCTTGCCCATTG- 241677
Query 70907 TAGGATCGGCTATGTGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTG 70966
| ||||| |||||||| |||||||| || ||| || ||| | || || | ||| |
Sbjct 241678 TGGGATCCTTCATGTGAATGTTCATCGATTGTGATTGGTCAATGTAAGCACCACGGTCAG 241737
Query 70967 CAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAA 71026
| ||||||| | ||| || |||| |||||||||| || || |||| ||| |
Sbjct 241738 CGGCCATTTGGACGATGGTTCGCTGTGAGATTTCCCAAACGGTCTTGTAAAGAGCCTTGA 241797
Query 71027 TATCTTCTGGAAGGTTTG---TATTCTGAATGGATCCACCATCTGCAATAATCCTATTTT 71083
|||| |||| | ||| | | |||||||| ||||||||||| ||||| || | || |
Sbjct 241798 TATCAGCTGGGATGTTGGGGATGTTCTGAATCGATCCACCATCGGCAATGATACGGTTCT 241857
Query 71084 TGATCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACTA 71143
| || | ||| ||| | | || | | | | || | || || || |
Sbjct 241858 TCATGTTGTCAGACCAGAGACCCATGTCAACAAGATCCTTGAGCAACCATGGGTTGACGA 241917
Query 71144 CTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCACTG 71203
|||| || || |||| | || | ||||| ||| || || ||||| || || |
Sbjct 241918 CTTGGAACTCGCCAGCAAGAACACGACGAGAGTAGATGTTGGACGTATATGGCTCAAAGC 241977
Query 71204 ACTCATTATTTCCCAAAATTTGAGCAGTTGAT-GCAGTCGGCATAGGTGCCACCAATAGA 71262
||||||| || | ||||||| | | || | ||||| |||||||| || || | |
Sbjct 241978 ACTCATTGAAGCCAAGAATTTGA-CTGGTGCTGGCAGTTGGCATAGGAGCGACAAGCAAG 242036
Query 71263 CTATTTCTAAGACCATGTGATCGGATTTTATCTTTTAGAGAT-TCCCAATTCCAAAGATC 71321
||||| | |||||||||| |||||| | || | || | ||||||| ||| |||||
Sbjct 242037 CTATTGCGAAGACCATGTTGCTTGATTTTCTGCTTCA-AGCTGTCCCAATCCCAGAGATC 242095
Query 71322 CGATGGTACAACNNNNNNNNNNNNNNNNNNNNNNATGCCGTTACTAGCGTATGATCCTGC 71381
| ||| ||| ||| || || || || |
Sbjct 242096 TGTTGGAGTAACACCCCACATATCATACTGCAACTCGCCCTTGGAGGCAGGAGAACCCTC 242155
Query 71382 ATATGTATCGTATGGTCCTTCTTTTTCGGCTAGTTCACAACT--CGCCTCTAATGCTCCA 71439
| |||| || || | || || | ||| || | ||||| || | ||| ||
Sbjct 242156 AAATGTCTCATAAGTGCCATCAACCTTGGCAAG--CTCAACTGAAGCAGTGAGTGCGGCA 242213
Query 71440 TAATAAATGGTTTCGAAAATCTTCTTATTGAGAT-CTTGTGCTTCCGGGCTATCAAATGG 71498
| || ||||| ||||| || | | ||||| | |||| || || || || |||||
Sbjct 242214 TGGTAGATGGTCTCGAAGATTTGAATGTTGAGGTGCTTG-GCCTCTGGAGAGTCGAATGG 242272
Query 71499 ATAATTTAAGAG--AATAAACGCGTCTGCTAATCCTTGAACGCCAATACCGATAGGTCTG 71556
| | ||||| || ||| || || || | || || || |||| ||||||||| |
Sbjct 242273 A-AGACGAAGAGCCAAGAAA-GCATCAGCAAGACCCTGGACACCAACGGCGATAGGTCGG 242330
Query 71557 TGTCTCTTATTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTA 71616
|| | || | | ||||| |||| ||| ||||| || | ||| || || ||
Sbjct 242331 TGGCGGAAGTTGCTTCTCTTGGCTTCGGGAACAGGGTAATAGTTGACATCAATGATCTTG 242390
Query 71617 TTGAGATTTCTGACTATTACTTTGACCACATCCTTTAGTTTGAGAAAATCAAATCTCCC- 71675
|| | || |||| | |||| | || || | ||| | | || ||| | | ||
Sbjct 242391 TTCAAGTTCTTGACAACGACTTGGCAGACTTCGTGAAGTCTCTGGAAGTCATAAGTGCCG 242450
Query 71676 ---ATCTATTACAAACACGT-TCAAG-GCAACAGATGCCAGATTACAAACGGCTACCTCA 71730
|| | | | | || ||| |||| || |||| || || ||||| ||||||
Sbjct 242451 TTGTTCATGTCGACATAGGTAGGAAGGGCAAGTGAAGCCAAGTTGCAGACGGCAACCTCA 242510
Query 71731 TTAGCATCGGCATATTGTATAATTTCAGTGCAAAGATTACTACACTT--GATGGTTCCTA 71788
| | | | || | | ||| |||||||| || || | | ||| |||||| || |
Sbjct 242511 TCTGGAGCACAGTACTCAACAATCTCAGTGCAGAGGTT-CGA-GCTTCGGATGGTACCGA 242568
Query 71789 AATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATAAACGGAGTACCAG 71848
||| | || || |||||| |||| || |||||||| ||||| || || ||| | ||||
Sbjct 242569 GATTCTTCTGGTTGCTCTTTCTGTTGCAAGCATCCTTGTAAAGCATGAAGGGATTGCCAG 242628
Query 71849 TTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATATTCTTGT 71908
| || |||||| || | || | | ||||| | | |||| | || |||||
Sbjct 242629 TCTCGGTCTGAGCCTCCAGGATGGAGTACCAGAGCTTTTGCGCCT---TGATGGTCTTGC 242685
Query 71909 ATCTCTT---TTCTCTTTCGTATTG--TGTATATAATCGTTCGAACTCGTCTCCCCAAGC 71963
| ||| ||| | || || || ||| | | | ||||| || || || | |
Sbjct 242686 GACCCTTACCTTCGCGCTCATACTGCTCGTAGAGAGCC--TCGAATTCATCGCCATAGAC 242743
Query 71964 ATTGTCTAATCCAGGACATTCATTCGGACACATCAATGACCACTCTCCATCATCATTT-- 72021
|| | || || || || ||||| || |||||||| | |||||| |||| || |||
Sbjct 242744 ATCAGCCAAGCCTGGGCACTCATTGGGGCACATCAAAGTCCACTCGCCAT--TCTTTTCA 242801
Query 72022 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGC 72081
||||| ||||| || |||||||||||||| || || || ||||| | | || |
Sbjct 242802 ACTCGCTTCATGAAAAGATCAGGAATCCACAGGGCGTAGAAGAGATCACGAGCTCGGACC 242861
Query 72082 TCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGT 72141
||||| || || ||||||| |||||| ||| || | | | ||| | ||||| ||
Sbjct 242862 TCCTCCTTGCCGTGATTCTTTCGAAGATCAAGGTACTCGAAGACATCGGCGTGCCATGGC 242921
Query 72142 TCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCG 72201
|| | || || || | | | || || || ||||| || || || || | ||| | |||
Sbjct 242922 TCAAGATAGATAGCGAAAGCACCTGGTCGCTTGTTACCACCTTGGTCAACGTAACGAGCA 242981
Query 72202 GTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAG 72261
||||| || | |||| | ||| || | || || || || |||||| || || |
Sbjct 242982 GTGTTGTTGAAGACTCGGAGCATGGGGACGATGCCGTTCGAGTTACCATTTGTTCCTGCA 243041
Query 72262 ATATAGCTTCCACTGGCACGAATATTGCTAATTGAT-AGACCTATTCCCCCTGCCATTTT 72320
|| ||| ||| | || || || | | | | | | || || ||||| || || | ||
Sbjct 243042 ATGTAGGCTCCGGTAGCGCGGAT-TCGATGAACGTTGAGGCCAATTCCACCAGCATTCTT 243100
Query 72321 AGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCAT 72380
|| || | ||||| || || || || ||||| || || ||||| || ||| ||||
Sbjct 243101 GGAAATCATGGCGCAAGTCTTCAATGTGTCGTAGATACCGTCGATACTGTCCTCCTTCAT 243160
Query 72381 GTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGG 72440
|| | || ||||| ||| | |||| | ||| || ||| || | || ||
Sbjct 243161 GTCGACAAGGAAACATGAAGAGAGTTGGGCTTGTGGAGTACCAGCAGCGAAGAGAGTTGG 243220
Query 72441 AGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTAT 72500
||||| ||||| || || || | |||| |||||||| |||||||| || | || ||
Sbjct 243221 GGAAGCATGCGTGAAGCACTTCTGGGACATCAGATTGTATGTCTCAATCGCAGCCTCGAT 243280
Query 72501 ATC-CCATTGATGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGA 72559
||| || | || || || || || || ||||| | ||| || || || | ||| ||
Sbjct 243281 ATCTTCACCG-TGAATGCCGACTGCTACTCGCATAATCATGTGTTGTGGGCGTTCGCAGA 243339
Query 72560 TCTTGTTATTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGT 72619
||||| ||| | | | ||| ||| || | ||| || || ||||| || | ||
Sbjct 243340 TCTTGCCATTGAGGCGGAGGAGGTATGATCGCTCGAGAGTCTTGAAGCCAAAGTATTGGT 243399
Query 72620 A--TGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGTTTATCCTTATATTTGTTAAC 72677
| ||||| ||||| ||||| | |||| | ||||| |||| ||| | ||| ||||
Sbjct 243400 AATTGAAA--TCTCGGTCGTAGACAATAGCGGAATTAAGTTCTGCCTCGTGCTTGATAAC 243457
Query 72678 -TATATCCATGGTGATACTTG-AAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACA 72735
| | || ||| || | || || |||||| | || ||||| |||||| ||
Sbjct 243458 ACACTTGTAT-GTG-GCCTCGCTGATCATAGGAGAAAGCTTGCCATTCCGAGGATTGACG 243515
Query 72736 TAGTTGAATAAATCCTCCATCAC-TTCACTAAATAGtttttttGTTTCCTTGTGTAGATT 72794
|||||| | | || ||||| || || | | || || || | |||||| || ||
Sbjct 243516 TAGTTGTAGAGGTCTGATATCACAGTCGAGAACT-GCTTCTTGGTCTGCTTGTGGAGGTT 243574
Query 72795 TGATACGGCTATTCTGGCGGCTAGAATGGCATAATCTGGATG 72836
|| || || |||| || || || |||||||| || |||||
Sbjct 243575 GGAGACTGCAATTCGTGCAGCGAGGATGGCATAGTCGGGATG 243616
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671138604363960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |