Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialocephala_20scopiformis_20[genbank_20GCA_5F001500285.1_202016-
01-07] 71 sequences; 48,876,257 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq4 107 3e-18
>seq4
Length=1888314
Score = 107 bits (118), Expect = 3e-18
Identities = 198/288 (69%), Gaps = 2/288 (1%)
Strand=Plus/Minus
Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078
|| ||| | |||||||| ||||| |||| || || ||||| | ||||||| | |||||
Sbjct 1225039 ATCTGGCAGATGTACAAGAAGGCCGAGGCGTCTTTCTGGACCGCCGAAGAGATTGATCTA 1224980
Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138
|| ||||| || |||| ||| | | | | ||| ||||| | || || ||
Sbjct 1224979 TCGAAGGATCTCCACGACTGGAACAACAAGCTCAATGACGACGAGCGTTACTTCATCTCC 1224920
Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTGACACGA 125198
||| | | || ||||| || | ||||||||||| |||||||| || || | ||
Sbjct 1224919 CACGTCCTCGCATTCTTCGCTGCATCCGATGGAATTGTCAACGAGAACTTGGTCGAGCGC 1224860
Query 125199 TTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGT-GCTTTTACGGATTCCAAATCATGAT 125257
||| | ||| | || || |||| |||| |||| ||||||||||||||||||||
Sbjct 1224859 TTCAGTGGTGAGGTCCAGATCCCTGAGGC-TCGTTGCTTCTACGGATTCCAAATCATGAT 1224801
Query 125258 TGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACAT 125305
||||| | ||||| || | ||||| || || |||| |||||
Sbjct 1224800 GGAGAATATCCACTCCGAGACATACTCCCTTCTCATCGACACATACAT 1224753
Score = 84.2 bits (92), Expect = 3e-11
Identities = 106/146 (73%), Gaps = 0/146 (0%)
Strand=Plus/Minus
Query 125427 CTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTT 125486
|| || |||||||||||||| ||||| |||||||| ||| || ||| |||||||
Sbjct 1224580 CTCGTCGCATTCGCCGCCGTCGAGGGTATCTTCTTCAGTGGTTCCTTCGCGTCCATCTTC 1224521
Query 125487 TGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGA 125546
||| | |||||||| || || ||| | || || || | || || | || |||||
Sbjct 1224520 TGGTTGAAGAAGCGTGGTCTTATGGCTGGTCTTACCTTCTCCAATGAACTCATCTCTCGT 1224461
Query 125547 GACGAGGGCCTACACTGTGACTTTGC 125572
|||||||| || ||| ||||||||
Sbjct 1224460 GACGAGGGTCTCCACACCGACTTTGC 1224435
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741058542309960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |