Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialocephala_20scopiformis_20[genbank_20GCA_5F001500285.1_202016-
01-07] 71 sequences; 48,876,257 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq4 131 4e-25
seq37 111 4e-19
>seq4
Length=1888314
Score = 131 bits (144), Expect = 4e-25
Identities = 167/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || |||| || | ||| || | ||| | || || || || ||||| || || ||
Sbjct 716113 ATACCACCTCGGAGACGAAGAACCAAATGAAGAGTCGACTCCTTTTGAATGTTGTAATCT 716172
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|| | ||| | |||||||| ||||| || ||||| || || || ||||| || || ||
Sbjct 716173 GACAAAGTGCGGCCGTCTTCAAGTTGCTTACCAGCGAAGATAAGTCTCTGCTGGTCGGGT 716232
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| || || || |||||||||||||| | || ||||| || | ||| || || |||
Sbjct 716233 GGGATGCCCTCCTTATCCTGAATCTTGGACTTGACATTGTCGATGGTGTCCGAAGATTCA 716292
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
||||| || || |||||||| ||||| | || || ||||| ||||||||
Sbjct 716293 ACCTCCAGAGTGATAGTCTTTCCAGTCAAAGTCTTAACAAAGATCTGCAT 716342
Score = 118 bits (130), Expect = 2e-21
Identities = 137/185 (74%), Gaps = 0/185 (0%)
Strand=Plus/Plus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| || || ||||| || |||||||| || ||||||| || || || ||||| || ||
Sbjct 716374 GTGGACTCCTTCTGGATGTTATAGTCGGAGAGAGTTCGGCCATCCTCAAGTTGCTTGCCG 716433
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
|| || || || | ||||| ||||| || || ||||| || ||||||||||| | ||
Sbjct 716434 GCGAAGATGAGACGTTGTTGGTCAGGGGGAATGCCTTCCTTGTCCTGAATCTTCGACTTC 716493
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
|| || || | ||||||| || ||| ||||| || || || ||||| ||||| || ||
Sbjct 716494 ACGTTGTCGATGGTATCGGAAGATTCGACCTCAAGAGTGATGGTCTTGCCAGTCAGGGTC 716553
Query 104543 TTTAC 104547
|| ||
Sbjct 716554 TTGAC 716558
>seq37
Length=479966
Score = 111 bits (122), Expect = 4e-19
Identities = 141/194 (73%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 104366 GATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCA 104425
|| || || ||||| || ||||| ||||| || | | ||||| ||||| || | ||||
Sbjct 404102 GACTCCTTTTGAATGTTGTAGTCGGATAGGGTGCGGCTATCTTCAAGTTGCTTACTAGCA 404161
Query 104426 AAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACA 104485
||||| || ||||| || || || || || || || |||||||||||||| | || ||
Sbjct 404162 AAAATAAGTCTCTGCTGGTCGGGTGGGATACCCTCCTTATCCTGAATCTTGGACTTGACG 404221
Query 104486 TTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTT 104545
|| || | || || || ||| ||||| | || |||||||| ||||| | || ||
Sbjct 404222 TTGTCGATAGTGTCCGAAGATTCAACCTCCAAAGTGATAGTCTTTCCAGTCAAGGTCTTA 404281
Query 104546 ACAAATATCTGCAT 104559
||||| || |||||
Sbjct 404282 ACAAAGATTTGCAT 404295
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151397352587268
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |