Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialocephala_20scopiformis_20[genbank_20GCA_5F001500285.1_202016- 01-07] 71 sequences; 48,876,257 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq8 125 1e-24 >seq8 Length=1610439 Score = 125 bits (138), Expect = 1e-24 Identities = 151/205 (74%), Gaps = 3/205 (1%) Strand=Plus/Minus Query 16512 GTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCT 16571 |||| ||||||||| |||| | || |||| ||||||| |||| ||| | |||| || Sbjct 780586 GTGGTGTCAAGCGTATCTCAGCCATGATCTACGAAGAGACCCGTGGTGTCCTCAAGACCT 780527 Query 16572 TCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTG 16631 ||||| || || || | ||| ||| || ||| || |||||||| || | ||||||| Sbjct 780526 TCCTCGAGGGTGTCATTCGTGACGCTGTCACCTACACTGAGCACGCCAAGAGAAAGACTG 780467 Query 16632 TCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTG 16691 |||||||| | ||| ||||||| ||| | || || |||||||||| |||| ||||| | Sbjct 780466 TCACCTCCCTCGATGTCGTCTACGCACTCAAGCGCCAAGGCCGTACCCTTTACGGTTTCG 780407 Query 16692 GAAGTTAA---TCTTCTAATCAAAC 16713 | | ||| |||||| ||| || Sbjct 780406 GTGGCTAAAAGTCTTCTCTTCACAC 780382 Score = 86.0 bits (94), Expect = 1e-12 Identities = 69/81 (85%), Gaps = 2/81 (2%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || ||| | ||||||| ||| |||||| || |||||||| || || |||||||| ||||| Sbjct 780717 GCCAAGAGACATCGCAAGAT-TCTTCGTGACAACATCCAGGGTATTACCAAGCCTGCTAT 780659 Query 16492 CCGTCGTCTGGCTCGTCGTGG 16512 ||||||||| ||||||||||| Sbjct 780658 CCGTCGTCTCGCTCGTCGTGG 780638 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075135084203