Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialocephala_20scopiformis_20[genbank_20GCA_5F001500285.1_202016-
01-07] 71 sequences; 48,876,257 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq8 125 1e-24
>seq8
Length=1610439
Score = 125 bits (138), Expect = 1e-24
Identities = 151/205 (74%), Gaps = 3/205 (1%)
Strand=Plus/Minus
Query 16512 GTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCT 16571
|||| ||||||||| |||| | || |||| ||||||| |||| ||| | |||| ||
Sbjct 780586 GTGGTGTCAAGCGTATCTCAGCCATGATCTACGAAGAGACCCGTGGTGTCCTCAAGACCT 780527
Query 16572 TCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTG 16631
||||| || || || | ||| ||| || ||| || |||||||| || | |||||||
Sbjct 780526 TCCTCGAGGGTGTCATTCGTGACGCTGTCACCTACACTGAGCACGCCAAGAGAAAGACTG 780467
Query 16632 TCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTG 16691
|||||||| | ||| ||||||| ||| | || || |||||||||| |||| ||||| |
Sbjct 780466 TCACCTCCCTCGATGTCGTCTACGCACTCAAGCGCCAAGGCCGTACCCTTTACGGTTTCG 780407
Query 16692 GAAGTTAA---TCTTCTAATCAAAC 16713
| | ||| |||||| ||| ||
Sbjct 780406 GTGGCTAAAAGTCTTCTCTTCACAC 780382
Score = 86.0 bits (94), Expect = 1e-12
Identities = 69/81 (85%), Gaps = 2/81 (2%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| ||| | ||||||| ||| |||||| || |||||||| || || |||||||| |||||
Sbjct 780717 GCCAAGAGACATCGCAAGAT-TCTTCGTGACAACATCCAGGGTATTACCAAGCCTGCTAT 780659
Query 16492 CCGTCGTCTGGCTCGTCGTGG 16512
||||||||| |||||||||||
Sbjct 780658 CCGTCGTCTCGCTCGTCGTGG 780638
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79075135084203
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |