Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialocephala_20scopiformis_20[genbank_20GCA_5F001500285.1_202016-
01-07] 71 sequences; 48,876,257 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq42 226 4e-54
seq4 113 6e-20
>seq42
Length=298824
Score = 226 bits (250), Expect = 4e-54
Identities = 1314/2068 (64%), Gaps = 55/2068 (3%)
Strand=Plus/Plus
Query 61995 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 62054
|| || || || ||||| || || | | ||||| ||||||||||| || ||||| |||
Sbjct 241572 GTAAACTGGATAGGAGCTGAAGCAGCCATGGTACGGAGATAGTACATGCCAGTTTTCAGA 241631
Query 62055 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 62114
|| | |||| || || |||||||| || | ||| | ||||| ||
Sbjct 241632 CCCAACTTCCAGCCAGCGAAGTGCATACTGGTGATCTTGCCCATTGTGGGATCCTTCATG 241691
Query 62115 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 62174
|| || ||||| ||||| ||| || ||| | || || | ||| || ||||||| | |
Sbjct 241692 TGAATGTTCATCGATTGTGATTGGTCAATGTAAGCACCACGGTCAGCGGCCATTTGGACG 241751
Query 62175 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 62234
|| || |||| |||||||||| || || |||| ||| ||||| |||| | |
Sbjct 241752 ATGGTTCGCTGTGAGATTTCCCAAACGGTCTTGTAAAGAGCCTTGATATCAGCTGGGATG 241811
Query 62235 TTTG---TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTC 62291
|| | | |||||||| ||||||||||| || || || | ||||| || | ||| |
Sbjct 241812 TTGGGGATGTTCTGAATCGATCCACCATCGGCAATGATACGGTTCTTCATGTTGTCAGAC 241871
Query 62292 CATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCA 62351
|| | | || | | | | || | || || || ||||| || || |||
Sbjct 241872 CAGAGACCCATGTCAACAAGATCCTTGAGCAACCATGGGTTGACGACTTGGAACTCGCCA 241931
Query 62352 GACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATTATTTCCC 62411
| | || | |||| ||| || || ||||| || || | ||||||| ||
Sbjct 241932 GCAAGAACACGACGAGAGTAGATGTTGGACGTATATGGCTCAAAGCACTCATTGAAGCCA 241991
Query 62412 AAAATTTGAGCAGTTGATG-CAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACC 62470
| ||||||| | | || || |||| |||||||| || || | || ||||| | ||||||
Sbjct 241992 AGAATTTGA-CTGGTGCTGGCAGTTGGCATAGGAGCGACAAGCAAGCTATTGCGAAGACC 242050
Query 62471 GTATGTTC--TGATTTTATCTTTTAGAGGT-TCCCAATTCCAAAGATCCGACGGTACAAC 62527
||||| ||||||| | || | || | ||||||| ||| ||||| | || |||
Sbjct 242051 --ATGTTGCTTGATTTTCTGCTTCA-AGCTGTCCCAATCCCAGAGATCTGTTGGAGTAAC 242107
Query 62528 NNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTATCGTA 62587
|| | || || ||| || || || |||| || ||
Sbjct 242108 ACCCCACATATCATACTGCAACTCGCCCTTGGAGGCAGGAGAACCCTCAAATGTCTCATA 242167
Query 62588 TGGTCCTTCCTTCTCAGCTAGTTCACAACTC--GCCTCTAATGCACCGTAATAAATGGTT 62645
| || || || || || ||| ||| || | ||| | | || |||||
Sbjct 242168 AGTGCCATCAACCTTGGCAAGCTCA--ACTGAAGCAGTGAGTGCGGCATGGTAGATGGTC 242225
Query 62646 TCGAAGATCTTCTTATTTAGAT-CTTGTGCTTCCAGGCTATCAAATGGATAATTTAAGAG 62704
|||||||| | | || || | |||| || || | || |||||| | |||||
Sbjct 242226 TCGAAGATTTGAATGTTGAGGTGCTTG-GCCTCTGGAGAGTCGAATGGAAGACG-AAGAG 242283
Query 62705 --AATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTA 62762
|| ||| || || || | || || ||||||| ||||||||| || | ||
Sbjct 242284 CCAAGAAA-GCATCAGCAAGACCCTGGACACCAACGGCGATAGGTCGGTGGCGGAAGTTG 242342
Query 62763 GAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTG 62822
| | ||||| |||| ||| ||||| || | ||| || || || || | || ||
Sbjct 242343 CTTCTCTTGGCTTCGGGAACAGGGTAATAGTTGACATCAATGATCTTGTTCAAGTTCTTG 242402
Query 62823 ACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCA-AATCGCCCATCT--ATTACA 62879
|||| |||| | || || | ||| | | || ||| || ||| | | || |
Sbjct 242403 ACAACGACTTGGCAGACTTCGTGAAGTCTCTGGAAGTCATAAGTGCCGTTGTTCATGTCG 242462
Query 62880 A-ACATGTTCAA--GGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCA 62936
| | | || | ||||| || |||| || || ||||| ||||||| | | |
Sbjct 242463 ACATAGGTAGGAAGGGCAAGTGAAGCCAAGTTGCAGACGGCAACCTCATCTGGAGCACAG 242522
Query 62937 TATTGTATTATCTCAGTGCAAAGATTACTACACTT--GATAGTTCCTAAATTTTGTTGAT 62994
|| | | ||||||||||| || || | | ||| ||| || || | ||| | || |
Sbjct 242523 TACTCAACAATCTCAGTGCAGAGGTT-CGAG-CTTCGGATGGTACCGAGATTCTTCTGGT 242580
Query 62995 TACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAG 63054
| |||||| |||| || |||||||| ||||| ||||| ||| | ||||| || ||||||
Sbjct 242581 TGCTCTTTCTGTTGCAAGCATCCTTGTAAAGCATGAAGGGATTGCCAGTCTCGGTCTGAG 242640
Query 63055 ATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATC--TCCTTTC 63112
|| | || | | ||||| | | ||||| || | || | | | | |||
Sbjct 242641 CCTCCAGGATGGAGTACCAGAGCTTTTGCGCCTTGATGGTC--TTGCGACCCTTACCTTC 242698
Query 63113 TCTTTCGTATAGT--GTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCA 63170
| || || | ||| | | | ||||| || || || | |||| |||| ||
Sbjct 242699 GCGCTCATACTGCTCGTAGAGAGCC--TCGAATTCATCGCCATAGACATCAGCCAAGCCT 242756
Query 63171 GGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAG 63230
|| || |||| || |||||||| | |||||| || | | | ||||| ||||| ||
Sbjct 242757 GGGCACTCATTGGGGCACATCAAAGTCCACTCGCCATTCTTTTCAACTCGCTTCATGAAA 242816
Query 63231 AGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTA 63290
|||||||||||||| || || || ||||| | | || ||||| || || |
Sbjct 242817 AGATCAGGAATCCACAGGGCGTAGAAGAGATCACGAGCTCGGACCTCCTCCTTGCCGTGA 242876
Query 63291 TTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCC 63350
|||||| |||||| ||| || | | | ||| | ||||| || || | || || ||
Sbjct 242877 TTCTTTCGAAGATCAAGGTACTCGAAGACATCGGCGTGCCATGGCTCAAGATAGATAGCG 242936
Query 63351 ATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACT 63410
| | | || || || ||||| || || || || | ||| | ||| ||||| || | |||
Sbjct 242937 AAAGCACCTGGTCGCTTGTTACCACCTTGGTCAACGTAACGAGCAGTGTTGTTGAAGACT 242996
Query 63411 CTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTG 63470
| | ||| || | || ||||| || ||||||| || || | || ||| ||| |
Sbjct 242997 CGGAGCATGGGGACGATGCCGTTCGAGTTACCATTTGTTCCTGCAATGTAGGCTCCGGTA 243056
Query 63471 GCACGAATATTACTAA--TTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGC 63528
|| || || | || ||| || || ||||| || || | || || || | ||||
Sbjct 243057 GCGCGGATTCGATGAACGTTG--AGGCCAATTCCACCAGCATTCTTGGAAATCATGGCGC 243114
Query 63529 ATCGTTTTAACGTGTCATAGATACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAAC 63588
| || || ||||| |||||||| || || || || || |||||| | || ||||
Sbjct 243115 AAGTCTTCAATGTGTCGTAGATACCGTCGATACTGTCCTCCTTCATGTCGACAAGGAAAC 243174
Query 63589 AGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAA 63648
| ||| | |||| | ||| || ||| || | || || ||||| ||||| |
Sbjct 243175 ATGAAGAGAGTTGGGCTTGTGGAGTACCAGCAGCGAAGAGAGTTGGGGAAGCATGCGTGA 243234
Query 63649 ACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATC-CCATTGATGA 63707
| || || | || | |||||||| |||||||| || | || ||||| || | |||
Sbjct 243235 AGCACTTCTGGGACATCAGATTGTATGTCTCAATCGCAGCCTCGATATCTTCACCG-TGA 243293
Query 63708 ATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATT 63767
|| || ||||| || ||||| | |||||| || || | ||| ||||||| || |
Sbjct 243294 ATGCCGACTGCTACTCGCATAATCATGTGTTGTGGGCGTTCGCAGATCTTGCCATTGAGG 243353
Query 63768 TTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTC 63825
| | ||| ||| || | ||| || || ||||| || | ||| ||||| ||||
Sbjct 243354 CGGAGGAGGTATGATCGCTCGAGAGTCTTGAAGCCAAAGTATTGGTAATTGAAA--TCTC 243411
Query 63826 GTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAAC-TATATCCATGGTG 63884
| ||||| | |||| | || || |||| ||| | ||| |||| | | || |||
Sbjct 243412 GGTCGTAGACAATAGCGGAATTAAGTTCTGCCTCGTGCTTGATAACACACTTGTAT-GTG 243470
Query 63885 ATACTTG-AAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATC 63943
|| | || || |||||| | || ||||| |||||| || |||||| | | ||
Sbjct 243471 -GCCTCGCTGATCATAGGAGAAAGCTTGCCATTCCGAGGATTGACGTAGTTGTAGAGGTC 243529
Query 63944 CTCCATCAC-TTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTC 64002
||||| || || | | || || || | |||||| || || || || || ||||
Sbjct 243530 TGATATCACAGTCGAGAACT-GCTTCTTGGTCTGCTTGTGGAGGTTGGAGACTGCAATTC 243588
Query 64003 TGGCGGCTAGAATGGCATAATCCGGATG 64030
|| || || |||||||| || |||||
Sbjct 243589 GTGCAGCGAGGATGGCATAGTCGGGATG 243616
>seq4
Length=1888314
Score = 113 bits (124), Expect = 6e-20
Identities = 333/513 (65%), Gaps = 3/513 (1%)
Strand=Plus/Plus
Query 33012 TTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATT 33071
||||||||| ||||| || || || || || || ||||| || || | | || || ||
Sbjct 1224140 TTTTTGGTAGTCACCAACGCGCTTCTCAAAGAAGTTAGTCTTGCCAGCGAGCGAGATGTT 1224199
Query 33072 TTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAAT 33131
||||| || ||||| || |||| | || || | || | | || | || ||
Sbjct 1224200 CTCCATAAAGTCAAATGGGTTGGCAGACTTGTAGACCTTCTCATTGCCGAGGGCAAGAAG 1224259
Query 33132 CAATCTATCCGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAG 33191
|| | ||| |||||||| || || ||| ||||||| | | ||||| || | ||
Sbjct 1224260 CAGACGATCAGCGACGAACTCGATGTATTGCTTCATCAGATTCGAGTTCATGCCAAGGAG 1224319
Query 33192 TTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAAT 33251
| | ||||||||| |||| | || ||||| ||||| || || || || || |
Sbjct 1224320 TGCACAAGGAAGAGCCTCAGTCAAGAACTCTTGCTCAATCTCGACAGCTTCGGTAATGAC 1224379
Query 33252 AGATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGAA 33311
| || | || | || || | ||| || || || | | || || ||
Sbjct 1224380 GTCTTGGACAGCTTGCTTGCTTGGGCGGTGCTTCAAGTGAGAGAAGAGAAGGCAAGCAAA 1224439
Query 33312 ATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCAT 33371
||| ||| ||||||||||| | | || ||||| ||||| || || || || | |||
Sbjct 1224440 GTCGGTGTGGAGACCCTCGTCACGAGAGATGAGTTCATTGGAGAAGGTAAGACCAGCCAT 1224499
Query 33372 TAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTC 33431
|| |||||||| || | ||| || ||||| ||||| || ||| |||||||| || ||
Sbjct 1224500 AAGACCACGCTTCTTCAACCAGAAGATGGACGCGAAGGAACCACTGAAGAAGATACCCTC 1224559
Query 33432 TACTGCAGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCGCTGTCATGTATCCACTT 33488
|| || || || || | || | | || | | | |||| || ||||||||
Sbjct 1224560 GACGGCGGCGAATGCGACGAGACGTTGAGCAAATGTAGAGTTCTTGTCTTGAATCCACTT 1224619
Query 33489 TTGAGCCCAATCGGCCTTCTTTTTTACACAAGG 33521
|||||| ||||||||||| || | ||| ||
Sbjct 1224620 GACAGCCCAGTCGGCCTTCTTCTTGATACATGG 1224652
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622946647134360
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