Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialocephala_20scopiformis_20[genbank_20GCA_5F001500285.1_202016-
01-07] 71 sequences; 48,876,257 total letters
Query= NC_007151.1
Length=149622
Score E
Sequences producing significant alignments: (Bits) Value
seq42 96.9 3e-15
seq4 86.0 6e-12
>seq42
Length=298824
Score = 96.9 bits (106), Expect = 3e-15
Identities = 422/653 (65%), Gaps = 31/653 (5%)
Strand=Plus/Plus
Query 148238 CTTGCCTTCGGCCTCGTAATTTTCGTAAAGGTCCTCGAATTCTTGGCCATAGCAATCGTT 148297
||| |||||| ||| || | ||||| || |||||||||| | ||||||| |||
Sbjct 242690 CTTACCTTCGCGCTCATACTGCTCGTAGAGAGCCTCGAATTCATCGCCATAGACATCAGC 242749
Query 148298 TAAACCGGGACACTCGTCGGGGCACATCAATGACCATTTCCCTCCTGTCTTT---ACCCT 148354
|| || || ||||| | |||||||||||| | ||| | | || ||||| || |
Sbjct 242750 CAAGCCTGGGCACTCATTGGGGCACATCAAAGTCCA---CTCGCCATTCTTTTCAACTCG 242806
Query 148355 CTTCATAAACAGATCAGGTGTCCACATGGCAAAAAGAAGATCGCGAGCCTTCATATCCTC 148414
|||||| || |||||||| |||||| ||| | | ||||| ||||| | |||||
Sbjct 242807 CTTCATGAAAAGATCAGGAATCCACAGGGCGTAGAAGAGATCACGAGCTCGGACCTCCTC 242866
Query 148415 GGCACCCATATTGCGCTTT---AGATCCaaaaaagta----aaaaCGTCTGCGTGCCAAG 148467
|| ||| |||| ||||| || ||| || || || |||||||| |
Sbjct 242867 CTTGCCGTGATT---CTTTCGAAGATC----AAGGTACTCGAAGACATCGGCGTGCCATG 242919
Query 148468 GCTCGATGTATACGGTCATGGCGCCT--TTCCTT-TTACCTCCTTGATCGACATGGCGTA 148524
|||| | || | | | || ||| | ||| ||||| ||||| || || | || |
Sbjct 242920 GCTCAAGATAGATAGCGAAAGCACCTGGTCGCTTGTTACCACCTTGGTCAACGTAACG-A 242978
Query 148525 GCA-TGCTATTAAAAACACGCAATGCA-GGTCCCAATCCCGCCGCAGTT-CCGTTTGTGG 148581
||| || | || || || || | ||| || | || ||| |||| || |||||
Sbjct 242979 GCAGTGTTGTTGAAGACTCGGA--GCATGGGGACGATGCCGTTCGAGTTACCATTTGTTC 243036
Query 148582 ATTCAATTTTACTATTGGTGGCGCGAATTTGAGTGACATTCAGGCCGATGCCGCCTCCGT 148641
| |||| | ||| ||||| ||| || || || ||||| || || || | |
Sbjct 243037 CTGCAATGTAGGCTCCGGTAGCGCGGATTCGATGAACGTTGAGGCCAATTCCACCAGCAT 243096
Query 148642 GTTTAGATATCATGGCACAATCGTTGAGTGTTTTATAGATGCCGTTAATACTGTCCTCTT 148701
|| || |||||||| ||| || | ||| | ||||| |||| ||||||||||| |
Sbjct 243097 TCTTGGAAATCATGGCGCAAGTCTTCAATGTGTCGTAGATACCGTCGATACTGTCCTCCT 243156
Query 148702 GAATGTTAAGCAGGTAGCACGATGACATTTGAGGCATTTTCA-TGCCAGACGAAAATAGA 148760
|||| | ||| | || || || | ||| ||| | | | | |||| | || |||
Sbjct 243157 TCATGTCGACAAGGAAACATGAAGAGAGTTG-GGCTTGTGGAGTACCAGCAGCGAAGAGA 243215
Query 148761 GTTGGACTAGCGTGAGTGAACAGCTTTGCCCGCATCAATCTATAGGATTCGATAGCGCTT 148820
||||| ||| || ||||| ||| ||||| | || | || || ||
Sbjct 243216 GTTGGGGAAGCATGCGTGAAGCACTTCTGGGACATCAGATTGTATGTCTCAATCGCAGCC 243275
Query 148821 TCGATGTCATCACCATGAATCTGTAGAGCTACACGCATCAGCATGTGTTGAGG 148873
||||| || ||||| ||||| | ||||| ||||| | ||||||||| ||
Sbjct 243276 TCGATATCTTCACCGTGAATGCCGACTGCTACTCGCATAATCATGTGTTGTGG 243328
>seq4
Length=1888314
Score = 86.0 bits (94), Expect = 6e-12
Identities = 228/348 (66%), Gaps = 19/348 (5%)
Strand=Plus/Plus
Query 119645 GTACTCGCCCACACGTTTTTCaaaaaaaTTAGTCTTGCCCTCAAGAGATATGTTATTCAT 119704
||| || || || || || ||||| || ||||||||||| | || || ||||| | |||
Sbjct 1224146 GTAGTCACCAACGCGCTTCTCAAAGAAGTTAGTCTTGCCAGCGAGCGAGATGTTCTCCAT 1224205
Query 119705 AAACTCGAAAGGATTTGCAGTGTTGAAATGCTTGTCGTAGCCCAACTCGAACAACAGTCG 119764
||| || || || || |||| ||| | ||| || | ||| | | | | ||| ||
Sbjct 1224206 AAAGTCAAATGGGTTGGCAGACTTGTAGACCTTCTCATTGCCGAGGGCAAGAAGCAGACG 1224265
Query 119765 ATCTGCCACAAACTCGATGTATTCGCACAT-GGATTGCGAATTCATGCCCAACATAGCGA 119823
||| || || ||||||||||||| ||| |||| ||| |||||||| | | ||
Sbjct 1224266 ATCAGCGACGAACTCGATGTATTGCTTCATCAGATT-CGAGTTCATGCCAAGGAGTGCAC 1224324
Query 119824 CCGGTAAAGCATTGGTAAAGAAATCCTTTTCAATGTCGACCGCTTCTACAAACATACTCA 119883
|| | ||| | || ||||| || | ||||| ||||| ||||| || |
Sbjct 1224325 AAGGAAGAGCCTCAGTCAAGAACTCTTGCTCAATCTCGACAGCTTCGGTAATGA------ 1224378
Query 119884 ACACCTTGGTCTTGGAGAGCTTGTTCTTTTCGG----GAATATATTTATTGTAGTATAGA 119939
|||||||| |||||| | || || | | | | | | || ||
Sbjct 1224379 -------CGTCTTGGACAGCTTGCTTGCTTGGGCGGTGCTTCAAGTGAGAGAAGAGAAGG 1224431
Query 119940 CAAGCAAAGTCGGTGTGTAGTCCTTCGTCTCTGGAAATGAGTTCGTTG 119987
||||||||||||||||| || || ||||| | || |||||||| |||
Sbjct 1224432 CAAGCAAAGTCGGTGTGGAGACCCTCGTCACGAGAGATGAGTTCATTG 1224479
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478661975187120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |