Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialocephala_20scopiformis_20[genbank_20GCA_5F001500285.1_202016- 01-07] 71 sequences; 48,876,257 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq4 122 8e-23 seq16 109 5e-19 >seq4 Length=1888314 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || ||||| | |||||||||||||| ||||||||||| ||| Sbjct 715888 CCACCACGGAGACGGAGAACCAAATGGAGAGTCGACTCCTTTTGGATGTTGTAATCACTC 715947 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || ||| ||||| | ||||| || || |||| || ||||||||||| || ||| Sbjct 715948 AGTGTACGCCCATCCTCCAATTGCTTACCAGCAAAGATCAATCGCTGCTGGTCGGGTGGG 716007 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| ||| ||||| | || | || || | ||||| | Sbjct 716008 ATACCCTCCTTGTCTTGGATCTTCGACTTGACATTGTCAATGGTGTCCGAAGACTCCACT 716067 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | |||| ||| || ||||| | ||| || || || || ||||| Sbjct 716068 TCCAATGTAATGGTCTTTCCGGTCAAAGTCTTGACAAAGATTTGCAT 716114 Score = 93.3 bits (102), Expect = 4e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || ||||| | |||||||||||||||||||||||||| | Sbjct 716116 CCACCTCGGAGACGAAGAACCAAATGAAGAGTCGACTCCTTTTGAATGTTGTAATCTGAC 716175 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||| || || ||||| || ||| |||| | | ||||||||| || ||| Sbjct 716176 AAAGTGCGGCCGTCTTCAAGTTGCTTACCAGCGAAGATAAGTCTCTGCTGGTCGGGTGGG 716235 Query 131128 ATTCCTTCTTTGTC 131141 || || || || || Sbjct 716236 ATGCCCTCCTTATC 716249 >seq16 Length=1327714 Score = 109 bits (120), Expect = 5e-19 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | |||||| || | ||| | ||||||||||| || |||||||||||| Sbjct 332080 CCACCACGGAGACGCAGGACGAGATGAAGAGTCGACTCCTTCTGGATGTTGTAATCGGAG 332139 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||||| || |||||||| ||| |||| | || || ||||| || || Sbjct 332140 AGAGTGCGGCCATCCTCGAGTTGCTTGCCAGCGAAGATCAGGCGTTGTTGGTCGGGTGGA 332199 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 |||||||| ||||| |||||| ||||| | || | ||||||| ||||| | Sbjct 332200 ATTCCTTCCTTGTCTTGGATTTTGGACTTGACATTGTCGATGGTATCGGAAGACTCCACC 332259 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAA 131225 |||| || | || || || || || || || ||||| Sbjct 332260 TCGAGTGTGATAGTCTTGCCCGTGAGGGTCTTGACGAA 332297 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472012381088640