Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialocephala_20scopiformis_20[genbank_20GCA_5F001500285.1_202016-
01-07] 71 sequences; 48,876,257 total letters
Query= NC_008291.1
Length=198050
Score E
Sequences producing significant alignments: (Bits) Value
seq42 221 2e-52
>seq42
Length=298824
Score = 221 bits (244), Expect = 2e-52
Identities = 1312/2069 (63%), Gaps = 57/2069 (3%)
Strand=Plus/Plus
Query 61850 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 61909
|| || || || ||||| || || | | ||||| ||||||||||| || ||||| |||
Sbjct 241572 GTAAACTGGATAGGAGCTGAAGCAGCCATGGTACGGAGATAGTACATGCCAGTTTTCAGA 241631
Query 61910 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 61969
|| | |||| || || |||||||| || | ||| | ||||| ||
Sbjct 241632 CCCAACTTCCAGCCAGCGAAGTGCATACTGGTGATCTTGCCCATTGTGGGATCCTTCATG 241691
Query 61970 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATA 62029
|| || ||||| ||||| ||| || ||| | || || | ||| || ||||||| |
Sbjct 241692 TGAATGTTCATCGATTGTGATTGGTCAATGTAAGCACCACGGTCAGCGGCCATTTGGACG 241751
Query 62030 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 62089
|| || |||| |||||||||| || || |||| ||| ||||| |||| | |
Sbjct 241752 ATGGTTCGCTGTGAGATTTCCCAAACGGTCTTGTAAAGAGCCTTGATATCAGCTGGGATG 241811
Query 62090 TTTG---TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTC 62146
|| | | |||||||| ||||||||||| || || || | ||||| || | ||| |
Sbjct 241812 TTGGGGATGTTCTGAATCGATCCACCATCGGCAATGATACGGTTCTTCATGTTGTCAGAC 241871
Query 62147 CATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCA 62206
|| | | || | | | | || | || || || ||||| || || |||
Sbjct 241872 CAGAGACCCATGTCAACAAGATCCTTGAGCAACCATGGGTTGACGACTTGGAACTCGCCA 241931
Query 62207 GACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATTTCCC 62266
| | || | |||| ||| || || ||||| || || | ||||||| ||
Sbjct 241932 GCAAGAACACGACGAGAGTAGATGTTGGACGTATATGGCTCAAAGCACTCATTGAAGCCA 241991
Query 62267 AAAATTTGAGCAGTTGATG-CAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACC 62325
| ||||||| | | || || |||| |||||||| || || | || ||||| | ||||||
Sbjct 241992 AGAATTTGA-CTGGTGCTGGCAGTTGGCATAGGAGCGACAAGCAAGCTATTGCGAAGACC 242050
Query 62326 GTATGTTC--TGATTTTATCTTTTAGAGGT-TCCCAATTCCAAAGATCCGACGGTACAAC 62382
||||| ||||||| | || | || | ||||||| ||| ||||| | || |||
Sbjct 242051 --ATGTTGCTTGATTTTCTGCTTCA-AGCTGTCCCAATCCCAGAGATCTGTTGGAGTAAC 242107
Query 62383 NNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTATCGTA 62442
|| | || || ||| || || || |||| || ||
Sbjct 242108 ACCCCACATATCATACTGCAACTCGCCCTTGGAGGCAGGAGAACCCTCAAATGTCTCATA 242167
Query 62443 TGGTCCTTCCTTCTCAGCTAGTTCACAACTC--GCCTCTAATGCACCGTAATAAATGGTT 62500
| || || || || || ||| ||| || | ||| | | || |||||
Sbjct 242168 AGTGCCATCAACCTTGGCAAGCTCA--ACTGAAGCAGTGAGTGCGGCATGGTAGATGGTC 242225
Query 62501 TCGAAGATCTTCTTATTTAGAT-CTTGCGCTTCCAGGCTATCAAATGGATAATTTAAGAG 62559
|||||||| | | || || | |||| || || | || |||||| | |||||
Sbjct 242226 TCGAAGATTTGAATGTTGAGGTGCTTG-GCCTCTGGAGAGTCGAATGGAAGACG-AAGAG 242283
Query 62560 --AATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTA 62617
|| ||| || || || | || || ||||||| ||||||||| || | ||
Sbjct 242284 CCAAGAAA-GCATCAGCAAGACCCTGGACACCAACGGCGATAGGTCGGTGGCGGAAGTTG 242342
Query 62618 GAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTG 62677
| | ||||| |||| ||| ||||| || | ||| || || || || | || ||
Sbjct 242343 CTTCTCTTGGCTTCGGGAACAGGGTAATAGTTGACATCAATGATCTTGTTCAAGTTCTTG 242402
Query 62678 ACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCA-AATCGCCCATCT--ATTACA 62734
|||| |||| | || || | ||| | | || ||| || ||| | | || |
Sbjct 242403 ACAACGACTTGGCAGACTTCGTGAAGTCTCTGGAAGTCATAAGTGCCGTTGTTCATGTCG 242462
Query 62735 A-ACATGTTCAATG--CAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCA 62791
| | | || | | ||| || |||| || || ||||| ||||||| | | |
Sbjct 242463 ACATAGGTAGGAAGGGCAAGTGAAGCCAAGTTGCAGACGGCAACCTCATCTGGAGCACAG 242522
Query 62792 TATTGTATTATCTCAGTGCAAAGATTACTACACTT--GATGGTTCCTAAATTTTGTTGAT 62849
|| | | ||||||||||| || || | | ||| |||||| || | ||| | || |
Sbjct 242523 TACTCAACAATCTCAGTGCAGAGGTT-CGAG-CTTCGGATGGTACCGAGATTCTTCTGGT 242580
Query 62850 TACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAG 62909
| |||||| |||| || |||||||| ||||| ||||| ||| | ||||| || ||||||
Sbjct 242581 TGCTCTTTCTGTTGCAAGCATCCTTGTAAAGCATGAAGGGATTGCCAGTCTCGGTCTGAG 242640
Query 62910 ATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCTCTT---TT 62966
|| | || | | ||||| | | ||||| || | ||| | ||| ||
Sbjct 242641 CCTCCAGGATGGAGTACCAGAGCTTTTGCGCCTTGATGGTC---TTGCGACCCTTACCTT 242697
Query 62967 CTCTTTCGTATAGT--GTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAGTCC 63024
| | || || | ||| | | | ||||| || || || | |||| ||| ||
Sbjct 242698 CGCGCTCATACTGCTCGTAGAGAGCC--TCGAATTCATCGCCATAGACATCAGCCAAGCC 242755
Query 63025 AGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAA 63084
|| || |||| || |||||||| | |||||| || | | | ||||| ||||| ||
Sbjct 242756 TGGGCACTCATTGGGGCACATCAAAGTCCACTCGCCATTCTTTTCAACTCGCTTCATGAA 242815
Query 63085 GAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGT 63144
|||||||||||||| || || || ||||| | | || ||||| || ||
Sbjct 242816 AAGATCAGGAATCCACAGGGCGTAGAAGAGATCACGAGCTCGGACCTCCTCCTTGCCGTG 242875
Query 63145 ATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGC 63204
||||||| |||||| ||| || | | | ||| | ||||| || || | || || ||
Sbjct 242876 ATTCTTTCGAAGATCAAGGTACTCGAAGACATCGGCGTGCCATGGCTCAAGATAGATAGC 242935
Query 63205 CATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAAC 63264
| | | || || || ||||| || || || || | ||| | ||| ||||| || | ||
Sbjct 242936 GAAAGCACCTGGTCGCTTGTTACCACCTTGGTCAACGTAACGAGCAGTGTTGTTGAAGAC 242995
Query 63265 TCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGCTTCCACT 63324
|| | ||| || | || || || || ||||||| || |||| || ||| ||| |
Sbjct 242996 TCGGAGCATGGGGACGATGCCGTTCGAGTTACCATTTGTTCCTGCAATGTAGGCTCCGGT 243055
Query 63325 GGCACGAATATTACTAA--TTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCG 63382
|| || || | || ||| || || ||||| || || | || || || | |||
Sbjct 243056 AGCGCGGATTCGATGAACGTTG--AGGCCAATTCCACCAGCATTCTTGGAAATCATGGCG 243113
Query 63383 CATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAA 63442
|| || || || || ||||| || || ||||| || ||| |||||| | || |||
Sbjct 243114 CAAGTCTTCAATGTGTCGTAGATACCGTCGATACTGTCCTCCTTCATGTCGACAAGGAAA 243173
Query 63443 CAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTA 63502
|| ||| | |||| | ||| || ||| || | || || ||||| || ||
Sbjct 243174 CATGAAGAGAGTTGGGCTTGTGGAGTACCAGCAGCGAAGAGAGTTGGGGAAGCATGCGTG 243233
Query 63503 AACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATC-CCATTGATG 63561
|| || || | || | |||||||| |||||||| || | || ||||| || | ||
Sbjct 243234 AAGCACTTCTGGGACATCAGATTGTATGTCTCAATCGCAGCCTCGATATCTTCACCG-TG 243292
Query 63562 AATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTAT 63621
||| || ||||| || ||||| | |||||| || || | ||| ||||||| || |
Sbjct 243293 AATGCCGACTGCTACTCGCATAATCATGTGTTGTGGGCGTTCGCAGATCTTGCCATTGAG 243352
Query 63622 TTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCT 63679
| | ||| ||| || | ||| || || ||||| || | ||| ||||| |||
Sbjct 243353 GCGGAGGAGGTATGATCGCTCGAGAGTCTTGAAGCCAAAGTATTGGTAATTGAAA--TCT 243410
Query 63680 CGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAAC-TACATCCATG-G 63737
|| ||||| | |||| | || || |||| ||| | ||| |||| || | ||| |
Sbjct 243411 CGGTCGTAGACAATAGCGGAATTAAGTTCTGCCTCGTGCTTGATAACACACTTGTATGTG 243470
Query 63738 TAATACTTGAAATAATAGGAAAATGTTTCCCATTTTTAGGATTGACATAGTTGAATAAAT 63797
| || || |||||| || | || ||||| ||||||||| |||||| | | |
Sbjct 243471 GCCTCGCTG--ATCATAGGAGAAAGCTTGCCATTCCGAGGATTGACGTAGTTGTAGAGGT 243528
Query 63798 CCTCCATCAC-TTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATT 63856
| ||||| || || | | || || || | ||||| || || || || || |||
Sbjct 243529 CTGATATCACAGTCGAGAACT-GCTTCTTGGTCTGCTTGTGGAGGTTGGAGACTGCAATT 243587
Query 63857 CTAGCGGCTAGAATGGCATAATCCGGATG 63885
| || || || |||||||| || |||||
Sbjct 243588 CGTGCAGCGAGGATGGCATAGTCGGGATG 243616
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 633631437651600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |