Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialocephala_20scopiformis_20[genbank_20GCA_5F001500285.1_202016- 01-07] 71 sequences; 48,876,257 total letters Query= NC_008725.1 Length=111953 Score E Sequences producing significant alignments: (Bits) Value seq4 89.7 4e-13 >seq4 Length=1888314 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 ||||| || ||| |||| || || || || || || || || |||| ||| | | Sbjct 716342 ATGCAGATCTTTGTTAAGACTTTGACTGGAAAGACTATCACTCTGGAGGTTGAATCTTCG 716283 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | | || | ||| || ||| ||||| ||||| | || |||| Sbjct 716282 GACACCATCGACAATGTCAAGTCCAAGATTCAGGATAAGGAGGGCATCCCACCCGACCAG 716223 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 |||||||||||||| ||||| || ||||| ||||| ||| || | |||||||| Sbjct 716222 CAGAGACTTATCTTCGCTGGTAAGCAACTTGAAGACGGCCGCACTTTGTCAGATTACAAC 716163 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 ||||| ||||| || ||||||||| |||| | ||| | ||||| || Sbjct 716162 ATTCAAAAGGAGTCGACTCTTCATTTGGTTCTTCGTCTCCGAGGTGG 716116 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 358124490110134