Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialocephala_20scopiformis_20[genbank_20GCA_5F001500285.1_202016-
01-07] 71 sequences; 48,876,257 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq4 102 2e-16
seq12 84.2 5e-11
>seq4
Length=1888314
Score = 102 bits (112), Expect = 2e-16
Identities = 173/251 (69%), Gaps = 0/251 (0%)
Strand=Plus/Minus
Query 243503 TCATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATTCCATGCCGGC 243562
|||| || ||||| || || | || | || ||| | || ||| |||| || |
Sbjct 1224378 TCATTACCGAAGCTGTCGAGATTGAGCAAGAGTTCTTGACTGAGGCTCTTCCTTGTGCAC 1224319
Query 243563 TTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATTT 243622
| ||||||||||||| | || ||| || |||||||| ||||| || || || |
Sbjct 1224318 TCCTTGGCATGAACTCGAATCTGATGAAGCAATACATCGAGTTCGTCGCTGATCGTCTGC 1224259
Query 243623 TCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAGC 243682
| | || || || ||||||| || ||||| || ||||| |||| ||||||||||
Sbjct 1224258 TTCTTGCCCTCGGCAATGAGAAGGTCTACAAGTCTGCCAACCCATTTGACTTTATGGAGA 1224199
Query 243683 TCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCAACGCC 243742
||| ||||| || || ||||||||||| || ||||| || |||| || |||
Sbjct 1224198 ACATCTCGCTCGCTGGCAAGACTAACTTCTTTGAGAAGCGCGTTGGTGACTACCAAAAAG 1224139
Query 243743 CTGGTGTGATG 243753
||||||| |||
Sbjct 1224138 CTGGTGTCATG 1224128
>seq12
Length=1482706
Score = 84.2 bits (92), Expect = 5e-11
Identities = 181/266 (68%), Gaps = 10/266 (4%)
Strand=Plus/Plus
Query 297508 CAACCAGTTGATGTTATTGCTTCCGACATAATCCTGTGCAAGGTTCACGATGGTCCCTTG 297567
||| ||||||| ||| || || ||| ||| || ||||| | ||| ||| ||
Sbjct 867336 CAAGCAGTTGACGTTGTTTGAGCCAACAAAATTTTGAGCAAGACCAATGATAGTCATATG 867395
Query 297568 CAGAGATGCTTCGCCATGGTGATAGGCGCTATGCTCTGCAACGTAACCGCTGAACTGTGC 297627
|| ||| ||||| || || || |||||| ||| ||| ||||||||||| || | |
Sbjct 867396 CATAGAAGCTTCACCGTGATGGTAGGCGGTATTCTCCCCAACGTAACCGGCCAATTCAAC 867455
Query 297628 AACCTTCACGTCGGTCGTCAA-ATTGCGCTTGAAAGCTGAATATATCACTTTCCGTTGAG 297686
||||||| ||| | ||| ||| |||||||| | | | || || || | ||
Sbjct 867456 CACCTTCATGTC-ACGGACAAGATTACGCTTGAAGCAAGCAAACATGACCTTTCTCTGTC 867514
Query 297687 AAGGTTTGAAACCATCAACGACCGACGGAATGCTTCGTTCCAGATCGTACCGCGA----G 297742
||| ||||||||||||| ||| ||||||||| ||| |||| || | || | |
Sbjct 867515 CAGGCTTGAAACCATCAAGGACAGACGGAATGGATCG---AAGATTGT-CAGCCATGCTG 867570
Query 297743 AACAAAATAAGTTCCTTGTCGATGAA 297768
|| | ||| |||||||| | || |||
Sbjct 867571 AAGAGAATCAGTTCCTTATTGACGAA 867596
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1102878996723850
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |