Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialocephala_20scopiformis_20[genbank_20GCA_5F001500285.1_202016-
01-07] 71 sequences; 48,876,257 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq42 178 2e-39
seq4 140 4e-28
>seq42
Length=298824
Score = 178 bits (196), Expect = 2e-39
Identities = 1125/1765 (64%), Gaps = 76/1765 (4%)
Strand=Plus/Plus
Query 113597 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATCGAGGAC 113656
||||| |||||||| || || || || ||| ||||||| || | ||||| ||
Sbjct 241605 CGGAGATAGTACATGCCAGTTTTCAGACCCAACTTCCAGCCAGCGAAGTGCATACTGGTG 241664
Query 113657 AACTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATG-AA 113715
| |||| | ||| ||| | |||| | |||||| ||| ||||| || ||| ||
Sbjct 241665 ATCTTGCCCATTGTGGGATCCTTCATGTGAATGTTCATCGATTGTGATTGGTCAATGTAA 241724
Query 113716 GCGTCCACGATCCGCCGCCATATCAATCACATCCTTCATCTTGA--TTTCCCACACAGTT 113773
|| ||||| || || ||||| | | | | ||| ||| ||||||| || ||
Sbjct 241725 GCA-CCACGGTCAGCGGCCATTTGGACGA--TGGTTCGCTGTGAGATTTCCCAAACGGTC 241781
Query 113774 CTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGAGCCACCCGCC 113833
|||| || ||| |||||| ||||||| | ||| || || || || ||||| |
Sbjct 241782 TTGTAAAGAGCCTTGATATCAGCTGGGATGTTGGGGATGTTCTGAATCGATCCACCATC- 241840
Query 113834 TTGACCATGAGA---TCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCC 113890
| | |||| | | |||||| | | ||||||||||| || | |||||||
Sbjct 241841 --GGCAATGATACGGTTCTTCATGTTGTCAGACCAGAGACCCATGTCAACAAGATCCTTG 241898
Query 113891 ACGAG--ATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGA-TAGATA 113947
| | ||| | |||| || ||||| || || || || | ||| |||||
Sbjct 241899 AGCAACCATGGGT--TGACGACTTGGAACTCGCCAGCAAGAACACGACG-AGAGTAGATG 241955
Query 113948 TTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAG-ATTTGGGCGGTGGAGGCTGT 114006
|||| ||| ||||||||||||||||||||| | ||||| ||||| |||| ||| ||
Sbjct 241956 TTGGACGTATATGGCTCAAAGCACTCATTG-AAGCCAAGAATTTGACTGGTGCTGGCAGT 242014
Query 114007 GGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAG 114066
||||| || || | || | ||| || || ||||| | || | | || | ||| |
Sbjct 242015 TGGCATAGGAGCGACAAGCAAGCTATTGCGAAGACCATGTTGCTTGATTTTCTGCTTCAA 242074
Query 114067 GGCGTCCCAGTCGTAGTTGAGCTTT----GTCTCCCCCTGCCACATATCAAACTGGAGGA 114122
| |||||| || || || || | || | || |||||||||| |||| |
Sbjct 242075 GCTGTCCCAATCCCAG-AGATCTGTTGGAGTAACACC---CCACATATCATACTGCAACT 242130
Query 114123 TACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCCAATT 114182
|| | |||||| || || |||||||||||||| || | ||| ||||||| || | |
Sbjct 242131 CGCCCTTGGAGGCAGGAGAACCCTCAAATGTCTCATAAGTGCCATCAACCTTGGCAAGCT 242190
Query 114183 CGGAGCT--CGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGC 114240
| | || || ||| || || || || || ||||| || || || || |
Sbjct 242191 C--AACTGAAGCAGTGAGTGCGGCATGGTAGATGGTCTCGAAGATTTGAATGTTGAGGTG 242248
Query 114241 CTTGGCCTCGTCGGAATCAAACGCGAGTCG-GCACAAAATAAATACATCCGCGAGACCTT 114299
||||||||| || || || | || || | || ||| |||| || ||||| |
Sbjct 242249 CTTGGCCTCTGGAGAGTCGAATGGAAGACGAAGAGCCAAGAAA-GCATCAGCAAGACCCT 242307
Query 114300 GGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTC-TCCACGGGA 114358
||||||| | | | || || || || | | | | | | || | || || ||
Sbjct 242308 GGACACCAACGGCGATAGGTCGGTGGCGGA-AGTTGCTTCTCTTGGCTTCGGGAACAGGG 242366
Query 114359 TAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAAC--CTTTG-TGATTTCA 114415
||| | || ||| || | | | || | || | ||||||| ||| | || |||
Sbjct 242367 TAATAGTTGACATCAATGATCTTGTTCAAGTTCT---TGACAACGACTTGGCAGACTTCG 242423
Query 114416 TGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCA--TTGACATACTTAGGAAGGGCGA 114473
||||| | | | | ||| || ||| || | |||| | |||||| |||||||||| |
Sbjct 242424 TGAAGTCTCTGGAAGTCATAAGTGC-CGT-TGTTCATGTCGACATAGGTAGGAAGGGCAA 242481
Query 114474 TTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTAC 114533
||| |||| || || || | |||||| | || |||||| | ||| || || |
Sbjct 242482 GTGAAGCCAAGTTGCAGACGGCAACCTCATCTGGAGCACAGTACTCAACAATCTCAGTGC 242541
Query 114534 ACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCAT 114593
| | || || || ||||| || | ||||| || || |||| |||| || ||||
Sbjct 242542 AGAGGTTCGAGCTTCGGATGGTACCGAGATTCTTCTGGTTGCTCTTTCTGTTGCAAGCAT 242601
Query 114594 CCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA 114653
|||||||||||||| | || | || ||||| || || | || || || | | |||||
Sbjct 242602 CCTTGTAAAGCATGAAGGGATTGCCAGTCTCGGTCTGAGCCTCCAGGATGGAGTACCAGA 242661
Query 114654 -CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCT--CCT----CCTCGTACTTTGTG 114706
| | ||| || | ||| ||| || |||| ||| ||| |||| |
Sbjct 242662 GCTTTTGCGCCTTG----ATGGTCTTG---CGACCCTTACCTTCGCGCTCATACTGCTCG 242714
Query 114707 TAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAG 114766
||||| || || || || || || | | || | | ||||| || || |||||
Sbjct 242715 TAGAGAGCCTCGAATTCATCGCCATAGACATCAGCCAAGCCTGGGCACTCATTGGGGCAC 242774
Query 114767 AAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGA 114826
| | || ||| | ||| || ||||| ||||||||||| || || || ||||| ||
Sbjct 242775 ATCAAAGTCCACTCGCCATTCTTTTCAACTCGCTTCATGAAAAGATCAGGAATCCACAGG 242834
Query 114827 GCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAA 114886
|| |||||||||| ||| || | || || | || ||||| || | || |
Sbjct 242835 GCGTAGAAGAGATCACGAGCTCGGACCTCCTCCTTGCCGTGATTCTTTCGAAGATCAAGG 242894
Query 114887 AAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACGACG- 114945
| || | || ||| |||||||| || || || || | |||| | | ||| | ||
Sbjct 242895 TACTCGAAGACATCGGCGTGCCATGGCTCAAGATAGATAGCGAAAG-CACCT--GGTCGC 242951
Query 114946 -----ACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATG 115000
|||| | |||| || || | || ||| || || || || ||||| || | |
Sbjct 242952 TTGTTACCACCTTGGTCAACGTAACGAGCAGTGTTGTTGAAGACTCGGAGCATGGGGACG 243011
Query 115001 ATACCATCAGATTGGCCATTTGTCCCCCGAATACGAGACT-TATTGGCTCTGACATCATG 115059
|| || | || | |||||||| || ||| || || | || | || |||
Sbjct 243012 ATGCCGTTCGAGTTACCATTTGTTCCTGCAAT-GTAGGCTCCGGTAGCGCGGATTCGATG 243070
Query 115060 GATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCC 115119
| || | ||||| || || || ||| || || ||||| | | | || |
Sbjct 243071 AACGTTGAGGCCAATTCCACCAGCATTCTTGGAAATCATGGCGCAAGTCTTCAATGTGTC 243130
Query 115120 GTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGG 115179
|||||| |||||||| ||| |||| | ||| |||||| || || | ||| ||
Sbjct 243131 GTAGATACCGTCGATACTGTCCTCCTTCATGTCGACAAGGAAACATGAAGAGAGTTG-GG 243189
Query 115180 CCT-TGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAA-CATACCTTGGGAC 115237
| | ||| |||||||| |||||| ||||| | || || |||| || | ||||||
Sbjct 243190 CTTGTGGAGTACCAGCAGCGAAGAGAGTTGGGGAAGCATGCGTGAAGCACTTC-TGGGAC 243248
Query 115238 ATCTTATCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACC 115297
||| || ||| ||||| | | || || ||||| |||||||| |||| | ||
Sbjct 243249 ATCAGATTGTATGTCTCAATCGCAGCCTCGATATCTTCACCGTGAATGCCGACTGCTACT 243308
Query 115298 CGCATAAACATGTATTG-GGGTGTT 115321
||||||| ||||| ||| ||| |||
Sbjct 243309 CGCATAATCATGTGTTGTGGGCGTT 243333
>seq4
Length=1888314
Score = 140 bits (154), Expect = 4e-28
Identities = 344/515 (67%), Gaps = 10/515 (2%)
Strand=Plus/Plus
Query 125758 GTAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCAT 125817
|||||| ||||| |||||||| |||||||| ||||| || | | ||| ||||||||
Sbjct 1224146 GTAGTCACCAACGCGCTTCTCAAAGAAGTTAGTCTTGCCAGCGAGCGAGATGTTCTCCAT 1224205
Query 125818 AAAATCAAATGGGTTCTTTGAGTTCCAAATTGTTGGCACCCCAATCTGTTTGAGG-AGAC 125876
||| ||||||||||| || || | | || || | | || | ||||
Sbjct 1224206 AAAGTCAAATGGGTTGGCAGACTTGTAGACC-TTCTCATTGCCGAGGGCAAGAAGCAGAC 1224264
Query 125877 GATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTAC 125936
|||| | |||| |||| ||||| | |||| | |||||||| || | ||| ||
Sbjct 1224265 GATCAGCGACGAACTCGATGTATTGCTTCATCAGATTCGAGTTCATGCCAAGGAGTGCAC 1224324
Query 125937 ATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACGATGGCGT 125996
| || || || || | |||| | | |||||| || || ||||| | || | | |
Sbjct 1224325 AAGGAAGAGCCTCAGTCAAGAACTCTTGCTCAATCTCGACAGCTTCGGTAATGACGTCTT 1224384
Query 125997 GAATGGTGTCCACCCCAGGTCTATTGCGCAAAGTCTT-GAAGAGTTCCACGGCAAACTCT 126055
| | | | | | || | | || |||| |||||| ||||| ||
Sbjct 1224385 GGACAGCTTGCTTGCTTGGGCGGT-GCTTCAAGTGAGAGAAGAGAAGGCAAGCAAAGTCG 1224443
Query 126056 TGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGA 126115
|||||||||||||||||| |||||||||||||| |||||| || || | ||| |||
Sbjct 1224444 GTGTGGAGACCCTCGTCACGAGAGATGAGTTCATTGGAGAAGGTAAGACCAGCCATAAGA 1224503
Query 126116 CCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACA 126175
|| ||||||||||||||||| || | || ||||| ||||||||| ||||| ||
Sbjct 1224504 CCACGCTTCTTCAACCAGAAGATGGACGCGAAGGAACCACTGAAGAAGATACCCTCGACG 1224563
Query 126176 CACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTC---AAACCACTTC 126232
||||| || | |||||| | |||||| | || || |||| || ||||||
Sbjct 1224564 GCGGCGAATGCGACGAGACGTTGAGCAAATG---TAGAGTTCTTGTCTTGAATCCACTTG 1224620
Query 126233 ATCGCCCACTGCGCCTTTTTCTCGATACACGGGAC 126267
| ||||| | ||||| |||| |||||| || ||
Sbjct 1224621 ACAGCCCAGTCGGCCTTCTTCTTGATACATGGAAC 1224655
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597353069848680
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