Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialocephala_20scopiformis_20[genbank_20GCA_5F001500285.1_202016-
01-07] 71 sequences; 48,876,257 total letters
Query= NC_010240.1
Length=169794
Score E
Sequences producing significant alignments: (Bits) Value
seq4 122 9e-23
seq37 93.3 5e-14
>seq4
Length=1888314
Score = 122 bits (134), Expect = 9e-23
Identities = 166/229 (72%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040
||| |||| | ||| | |||||||| | || |||||||||||| |||||||| |
Sbjct 716115 ACCACCTCGGAGACGAAGAACCAAATGAAGAGTCGACTCCTTTTGAATGTTGTAATCTGA 716174
Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100
|| ||| || |||| || || |||||||||||||| || |||| ||||||||||| |||
Sbjct 716175 CAAAGTGCGGCCGTCTTCAAGTTGCTTACCAGCGAAGATAAGTCTCTGCTGGTCGGGTGG 716234
Query 42101 CACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 42159
| || |||||| ||| ||| | || | |||| | | | ||||| ||||| |
Sbjct 716235 GATGCCCTCCTTATCC-TGAATCTTGGACTTGACATTGTCGATGGTGTCCGAAGATTCAA 716293
Query 42160 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
| || | ||||| || || || || | ||||| |||||||| |||||
Sbjct 716294 CCTCCAGAGTGATAGTCTTTCCAGTCAAAGTCTTAACAAAGATCTGCAT 716342
Score = 107 bits (118), Expect = 2e-18
Identities = 149/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 42000 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 42059
|||||||| | || ||||||||| || ||||||||| ||| || ||| | || ||
Sbjct 715906 ACCAAATGGAGAGTCGACTCCTTTTGGATGTTGTAATCACTCAGTGTACGCCCATCCTCC 715965
Query 42060 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATG 42119
| ||||||||||| || || | |||||||||||||| ||| | | ||||||||| |
Sbjct 715966 AATTGCTTACCAGCAAAGATCAATCGCTGCTGGTCGGGTGGGATACCCTCCTTGTCTTGG 716025
Query 42120 ATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTG 42179
|| || |||| | | | ||||| || ||||| || | || ||||| ||
Sbjct 716026 ATCTTCGACTTGACATTGTCAATGGTGTCCGAAGACTCCACTTCCAATGTAATGGTCTTT 716085
Query 42180 CCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
|| || | ||||| ||||||||||||||
Sbjct 716086 CCGGTCAAAGTCTTGACAAAGATTTGCAT 716114
>seq37
Length=479966
Score = 93.3 bits (102), Expect = 5e-14
Identities = 140/194 (72%), Gaps = 4/194 (2%)
Strand=Plus/Plus
Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076
|||||||||||| ||||| || | || || || || || || ||||||| ||| ||
Sbjct 404104 CTCCTTTTGAATGTTGTAGTCGGATAGGGTGCGGCTATCTTCAAGTTGCTTACTAGCAAA 404163
Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 42135
|| |||| ||||||||||| ||| | | |||||| ||| ||| | || | |||| ||
Sbjct 404164 AATAAGTCTCTGCTGGTCGGGTGGGATACCCTCCTTATCC-TGAATCTTGGACTTGA-CG 404221
Query 42136 TCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTT 42194
| | | | ||||| ||||| || || | ||||| || || || || | |||||
Sbjct 404222 TTGTCGATAGTGTCCGAAGATTCAACCTCCAAAGTGATAGTCTTTCCAGTCAAGGTCTTA 404281
Query 42195 ACAAAGATTTGCAT 42208
||||||||||||||
Sbjct 404282 ACAAAGATTTGCAT 404295
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 543212317898640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |