Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialocephala_20scopiformis_20[genbank_20GCA_5F001500285.1_202016-
01-07] 71 sequences; 48,876,257 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq42 181 1e-40
>seq42
Length=298824
Score = 181 bits (200), Expect = 1e-40
Identities = 602/922 (65%), Gaps = 12/922 (1%)
Strand=Plus/Minus
Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774
|||||| | ||||||| |||||| ||||| ||| || ||||||||| | |||||
Sbjct 243403 AATTACCAATACTTTGGCTTCAAGACTCTCGAGCGATCATACCTCCTCCGCCTCAATGGC 243344
Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834
| | | | ||| || || || || || | ||||| || || |||| |||||||| |
Sbjct 243343 AAGATCTGCGAACGCCCACAACACATGATTATGCGAGTAGCAGTCGGCATTCACGGTGAA 243284
Query 93835 GACATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATAC-CATGGC 93893
|| || | || | | | | || ||| | ||| | | || |||| |
Sbjct 243283 GATATCGAGGCTGCGATTGAGACATACAATCTGATGTCCCAGAAGTGCTTCACGCATG-C 243225
Query 93894 CACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGAT 93953
|||| || || ||| || || || || | || | ||||| |||||||| |
Sbjct 243224 TTCCCCAACTCTCTTCGCTGCTGGTACTCCACAAGCCCAACTCTCTTCATGTTTCCTTGT 243165
Query 93954 -GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCA 94012
||| | |||| ||| ||| ||| || | ||||| | ||| || || | |
Sbjct 243164 CGAC-ATGAAGGAGGACAGTATCGACGGTATCTACGACACATTGAAGACTTGCGCCATGA 243106
Query 94013 TCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCA-CGACGTACGTGCCAGGGGTTCC 94071
| || || | || || ||||| || ||| || || ||| | || || | || ||
Sbjct 243105 TTTCCAAGAATGCTGGTGGAATTGGCCTCAACGTTCATCGAA-TCCGCGCTACCGGAGCC 243047
Query 94072 TACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAAC 94131
||||| || || ||||| | ||| |||||| ||||||| |||||||| |||||||||
Sbjct 243046 TACATTGCAGGAACAAATGGTAACTCGAACGGCATCGTCCCCATGCTCCGAGTCTTCAAC 242987
Query 94132 AACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTAT 94191
||| | || || ||||| ||||| |||||| | | | ||| ||||||| |||||
Sbjct 242986 AACACTGCTCGTTACGTTGACCAAGGTGGTAACAAGCGACCAGGTGCTTTCGCTATCTAT 242927
Query 94192 CTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAAC 94251
|| ||||| |||||||| || || | | | | || || |||||||| ||||||||
Sbjct 242926 CTTGAGCCATGGCACGCCGATGTCTTCGAGTACCTTGATCTTCGAAAGAATCACGGCAAG 242867
Query 94252 GATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAA 94311
|| || | || | || ||||||||||| || ||| | || || ||||| |||||
Sbjct 242866 GAGGAGGTCCGAGCTCGTGATCTCTTCTACGCCCTGTGGATTCCTGATCTTTTCATGAAG 242807
Query 94312 CGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCC 94371
|| || || || || || |||| | | | || |||||||| || || || || |
Sbjct 242806 CGAGTTGAAAAGAATGGCGAGTGGACTTTGATGTGCCCCAATGAGTGCCCAGGCTTGGCT 242747
Query 94372 GACGTTTGTGGATCG-CGTTTTGAAGACT-TGTATGCTCGTTACGAATCGC-AGGGCAAG 94428
|| || | ||| || | || || || | || | | || | | ||| | || |||
Sbjct 242746 GATGTCTATGG--CGATGAATTCGAGGCTCTCTACGAGCAGTATG-AGCGCGAAGGTAAG 242690
Query 94429 GCCAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAG 94488
| | ||| || | || ||||| ||| | ||| |||| | ||| |||
Sbjct 242689 GGTCGCAAGACCATCAAGGCGCAAAAGCTCTGGTACTCCATCCTGGAGGCTCAGACCGAG 242630
Query 94489 ACGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCAC 94548
|| || | |||| ||| | | |||||| || |||| ||| ||||||| || |
Sbjct 242629 ACTGGCAATCCCTTCATGCTTTACAAGGATGCTTGCAACAGAAAGAGCAACCAGAAGAAT 242570
Query 94549 CTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGAC 94608
||||| ||| |||||||| || ||||| |||||||| ||||| | |||| ||
Sbjct 242569 CTCGGTACCATCCGAAGCTCGAACCTCTGCACTGAGATTGTTGAGTACTGTGCTCCAGAT 242510
Query 94609 GAGATTGCTGTGTGTAACCTGG 94630
||| |||| || || ||| |||
Sbjct 242509 GAGGTTGCCGTCTGCAACTTGG 242488
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494722760933160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |