Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialocephala_20scopiformis_20[genbank_20GCA_5F001500285.1_202016-
01-07] 71 sequences; 48,876,257 total letters
Query= NC_011423.1
Length=111724
Score E
Sequences producing significant alignments: (Bits) Value
seq4 105 5e-18
seq16 95.1 9e-15
>seq4
Length=1888314
Score = 105 bits (116), Expect = 5e-18
Identities = 150/211 (71%), Gaps = 0/211 (0%)
Strand=Plus/Plus
Query 14967 AACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTC 15026
||| ||||| || || || || ||||| ||||||||||| || || | | | | || ||
Sbjct 715905 AACCAAATGGAGAGTCGACTCCTTTTGGATGTTGTAATCACTCAGTGTACGCCCATCCTC 715964
Query 15027 TAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACA 15086
||||| || ||||| | ||||| ||||| |||||| ||| || || ||||||||
Sbjct 715965 CAATTGCTTACCAGCAAAGATCAATCGCTGCTGGTCGGGTGGGATACCCTCCTTGTCTTG 716024
Query 15087 AATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTT 15146
|| || || ||| | || || || || | || || || || |||||||| ||
Sbjct 716025 GATCTTCGACTTGACATTGTCAATGGTGTCCGAAGACTCCACTTCCAATGTAATGGTCTT 716084
Query 15147 ACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177
|| |||| ||| || ||||| |||||||||
Sbjct 716085 TCCGGTCAAAGTCTTGACAAAGATTTGCATA 716115
Score = 89.7 bits (98), Expect = 4e-13
Identities = 159/230 (69%), Gaps = 4/230 (2%)
Strand=Plus/Plus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009
|||||||| | | | ||| |||||||| || || || ||||| |||||||||| |||
Sbjct 716116 CCACCTCGGAGACGAAGAACCAAATGAAGAGTCGACTCCTTTTGAATGTTGTAAT--CTG 716173
Query 15010 AGAA--TTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTG 15067
| || | | ||||||| | ||| || |||||| | || | | ||| |||||| ||
Sbjct 716174 ACAAAGTGCGGCCGTCTTCAAGTTGCTTACCAGCGAAGATAAGTCTCTGCTGGTCGGGTG 716233
Query 15068 GAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTA 15127
| || || ||||| || ||| ||| || ||| | || || || || | ||| |
Sbjct 716234 GGATGCCCTCCTTATCCTGAATCTTGGACTTGACATTGTCGATGGTGTCCGAAGATTCAA 716293
Query 15128 CGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177
| || | || || || || || |||| ||| || ||||| || ||||||
Sbjct 716294 CCTCCAGAGTGATAGTCTTTCCAGTCAAAGTCTTAACAAAGATCTGCATA 716343
>seq16
Length=1327714
Score = 95.1 bits (104), Expect = 9e-15
Identities = 108/145 (74%), Gaps = 0/145 (0%)
Strand=Plus/Plus
Query 14973 ATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTG 15032
|||||| || || || || || |||||||||||| |||| | | | || || | |||
Sbjct 332103 ATGAAGAGTCGACTCCTTCTGGATGTTGTAATCGGAGAGAGTGCGGCCATCCTCGAGTTG 332162
Query 15033 TTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTT 15092
||||||||| | |||| || ||||||||| |||||||||||||||||| |||||
Sbjct 332163 CTTGCCAGCGAAGATCAGGCGTTGTTGGTCGGGTGGAATTCCTTCCTTGTCTTGGATTTT 332222
Query 15093 GCTTTTTACAATTTCTATAGTATCG 15117
| || ||| | || || ||||||
Sbjct 332223 GGACTTGACATTGTCGATGGTATCG 332247
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 357391690744235
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |