Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialocephala_20scopiformis_20[genbank_20GCA_5F001500285.1_202016-
01-07] 71 sequences; 48,876,257 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq4 165 1e-35
>seq4
Length=1888314
Score = 165 bits (182), Expect = 1e-35
Identities = 347/512 (68%), Gaps = 4/512 (1%)
Strand=Plus/Plus
Query 127231 GTAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATTCTCCAT 127290
|||||| || || |||||||| |||||||| ||||| ||| |||| ||| ||||||||
Sbjct 1224146 GTAGTCACCAACGCGCTTCTCAAAGAAGTTAGTCTTGCCAGCGAGCGAGATGTTCTCCAT 1224205
Query 127291 AAAATCAAATGGGTTCTTTGAGTTCCAAATTGTTGGCACCCCAATCTGTTTGAGG-AGAC 127349
||| ||||||||||| || || | | || || | | || | ||||
Sbjct 1224206 AAAGTCAAATGGGTTGGCAGACTTGTAGACC-TTCTCATTGCCGAGGGCAAGAAGCAGAC 1224264
Query 127350 GATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTAC 127409
|||| | |||| |||| ||||| | |||| | |||||||| || | ||| ||
Sbjct 1224265 GATCAGCGACGAACTCGATGTATTGCTTCATCAGATTCGAGTTCATGCCAAGGAGTGCAC 1224324
Query 127410 ATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTACGATGGCGT 127469
| || || || || | |||| | | |||||| || |||||||| | || | | |
Sbjct 1224325 AAGGAAGAGCCTCAGTCAAGAACTCTTGCTCAATCTCGACAGCTTCGGTAATGACGTCTT 1224384
Query 127470 GAATAGTGTCCACCCCAGGTCTATTGCGTAAAGTCTT-GAAGAGTTCCACAGCAAACTCT 127528
| | || | | | || | | || | |||| |||||| |||||| ||
Sbjct 1224385 GGACAGCTTGCTTGCTTGGGCGGT-GCTTCAAGTGAGAGAAGAGAAGGCAAGCAAAGTCG 1224443
Query 127529 TGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGA 127588
|||||||||||||||||| |||||||||||||| |||||| ||||| | ||| |||
Sbjct 1224444 GTGTGGAGACCCTCGTCACGAGAGATGAGTTCATTGGAGAAGGTAAGACCAGCCATAAGA 1224503
Query 127589 CCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACA 127648
|| ||||||||||||||||| || | || || ||| ||||||||| ||||| ||
Sbjct 1224504 CCACGCTTCTTCAACCAGAAGATGGACGCGAAGGAACCACTGAAGAAGATACCCTCGACG 1224563
Query 127649 CACGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGTATCAAACCACTTCATC 127708
||||| || | ||||| | ||||| | | ||| | || |||||| |
Sbjct 1224564 GCGGCGAATGCGACGAGACGTTGAGCAAATGTAGAGTTCTTGTCTTGAATCCACTTGACA 1224623
Query 127709 GCCCACTGTGCCTTTTTCTCGATACATGGGAC 127740
||||| | ||||| |||| ||||||||| ||
Sbjct 1224624 GCCCAGTCGGCCTTCTTCTTGATACATGGAAC 1224655
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613506655512360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |