Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialocephala_20scopiformis_20[genbank_20GCA_5F001500285.1_202016-
01-07] 71 sequences; 48,876,257 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq4 131 2e-25
seq16 116 4e-21
seq26 87.8 2e-12
>seq4
Length=1888314
Score = 131 bits (144), Expect = 2e-25
Identities = 195/276 (71%), Gaps = 3/276 (1%)
Strand=Plus/Plus
Query 133167 GTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAA 133226
||| ||||||||||| || || | || ||||| | |||||||| |||||| ||
Sbjct 1224755 GTATGTGTCGATGAGAAGGGAGTATGTCTCGGAGTGGATATTCTCCATCATGATTTGGAA 1224814
Query 133227 GCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATT 133286
||||| ||||| || ||||| | ||| || || | ||| |||||||||| ||
Sbjct 1224815 TCCGTAGAAGCAACGAGCCTCAGGGATCTGGACCTCACCACTGAAGCGCTCGACCAAGTT 1224874
Query 133287 TTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCG 133346
|||||||| || || ||| || ||||| || || || ||||| |||||| | ||
Sbjct 1224875 CTCGTTGACAATTCCATCGGATGCAGCGAAGAATGCGAGGACGTGGGAGATGAAGTAACG 1224934
Query 133347 CTCGTTGTCGTT---CAAGCGCTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTC 133403
||||| ||| || | | | ||||||| | ||||| || || || | ||| ||
Sbjct 1224935 CTCGTCGTCATTGAGCTTGTTGTTCCAGTCGTGGAGATCCTTCGATAGATCAATCTCTTC 1224994
Query 133404 GACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439
| ||||||| || ||||||||||| || ||||||||
Sbjct 1224995 GGCGGTCCAGAAAGACGCCTCGGCCTTCTTGTACAT 1225030
Score = 114 bits (126), Expect = 1e-20
Identities = 308/462 (67%), Gaps = 12/462 (3%)
Strand=Plus/Plus
Query 132591 CATCACGCCAAATTTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTC 132650
||| || ||| |||||| || || || || |||||||| || ||||| || || |
Sbjct 1224128 CATGACACCAGCTTTTTGGTAGTCACCAACGCGCTTCTCAAAGAAGTTAGTCTTGCCAGC 1224187
Query 132651 CAAGGAAATGAGCGTCATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTTGG---TGCC 132707
| || ||| | |||||| || || |||||||| | |||||| ||| ||||
Sbjct 1224188 GAGCGAGATGTTCTCCATAAAGTCAAATGGGTTGGCAGACTTGTAGACCTTCTCATTGCC 1224247
Query 132708 GATCAGGTCGACGAGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATG-GTTTCGC 132766
|| || | | ||||| | || || |||||||||||||||||| ||| | ||||
Sbjct 1224248 GA---GGGCAAGAAGCAGACGATCAGCGACGAACTCGATGTATTGCTTCATCAGATTCG- 1224303
Query 132767 AATTAAGTCCCAGCAGACGCACC-GGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCG 132825
| || | || || || |||| || || || || || | || |||||| || ||
Sbjct 1224304 AGTTCATGCCAAGGAGT-GCACAAGGAAGAGCCTCAGTCAAGAACTCTTGCTCAATCTCG 1224362
Query 132826 ACCGCGTCGGTGACGATTTCCCTAAC-GCGCGCCGCGCTCGGCCGTTGCACCAAATGCTT 132884
|| || ||||| | || || || || || ||| || || ||| ||| ||
Sbjct 1224363 ACAGCTTCGGTAATGACGTCTTGGACAGCTTGCTT-GCTTGGGCGGTGCTTCAAGTGAGA 1224421
Query 132885 GAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCT 132944
||| | | ||||||||||||| || | |||||||| | || |||||||| |||
Sbjct 1224422 GAAGAGAAGGCAAGCAAAGTCGGTGTGGAGACCCTCGTCACGAGAGATGAGTTCATTGGA 1224481
Query 132945 GAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCC 133004
||| || | || | ||| || || || || || | ||| || |||| ||||| ||
Sbjct 1224482 GAAGGTAAGACCAGCCATAAGACCACGCTTCTTCAACCAGAAGATGGACGCGAAGGAACC 1224541
Query 133005 CGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCG 133046
||||||| ||||||||||| ||||| || || || ||
Sbjct 1224542 ACTGAAGAAGATACCCTCGACGGCGGCGAATGCGACGAGACG 1224583
Score = 84.2 bits (92), Expect = 2e-11
Identities = 148/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| || || || || | || || || ||||| || | || || ||| | |
Sbjct 716114 ATGCAAATCTTTGTCAAGACTTTGACCGGAAAGACCATTACATTGGAAGTGGAGTCTTCG 716055
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | | | | | || || |||| ||||| ||||| || || |||||||
Sbjct 716054 GACACCATTGACAATGTCAAGTCGAAGATCCAAGACAAGGAGGGTATCCCACCCGACCAG 715995
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||||| | || | || || || || |||| || | ||| || || | || ||||||
Sbjct 715994 CAGCGATTGATCTTTGCTGGTAAGCAATTGGAGGATGGGCGTACACTGAGTGATTACAAC 715935
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
||||||||||| |||| || |||||||| || |||
Sbjct 715934 ATCCAAAAGGAGTCGACTCTCCATTTGGTTCTCCGT 715899
>seq16
Length=1327714
Score = 116 bits (128), Expect = 4e-21
Identities = 150/207 (72%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312
||||| || || ||||||||||| || ||||| |||| || ||| | |||| | | |
Sbjct 332297 TTCGTCAAGACCCTCACGGGCAAGACTATCACACTCGAGGTGGAGTCTTCCGATACCATC 332238
Query 38313 CAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTC 38372
| | | || ||||||| ||||| || |||||||| |||||||||| || ||
Sbjct 332237 GACAATGTCAAGTCCAAAATCCAAGACAAGGAAGGAATTCCACCCGACCAACAACGCCTG 332178
Query 38373 ATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAG 38432
|| | ||| ||||| || || || || | ||||| ||| ||| ||||||||||| |||
Sbjct 332177 ATCTTCGCTGGCAAGCAACTCGAGGATGGCCGCACTCTCTCCGATTACAACATCCAGAAG 332118
Query 38433 GAAGCGACGCTGCATTTGGTGCTGCGT 38459
|| |||| || ||| | || ||||||
Sbjct 332117 GAGTCGACTCTTCATCTCGTCCTGCGT 332091
>seq26
Length=969302
Score = 87.8 bits (96), Expect = 2e-12
Identities = 128/181 (71%), Gaps = 0/181 (0%)
Strand=Plus/Plus
Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312
||||| || || || |||||||| |||||||| | || |||||| || |||| | |
Sbjct 292092 TTCGTCAAGACCCTTACGGGCAAGACCATCACTCTTGAGGTCGAGTCCTCCGATACTATC 292151
Query 38313 CAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTC 38372
| | | || || |||| ||||| ||||||||||| | ||||||||||| |
Sbjct 292152 GACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCACCGGACCAACAGCGTTTG 292211
Query 38373 ATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAG 38432
|| | || || || || || || || | || |||||| ||| || ||||||||||||
Sbjct 292212 ATCTTTGCCGGAAAGCAACTTGAAGATGGCCGTACCCTCTCCGATTATAACATCCAAAAG 292271
Query 38433 G 38433
|
Sbjct 292272 G 292272
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500172356096640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |