Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialocephala_20scopiformis_20[genbank_20GCA_5F001500285.1_202016- 01-07] 71 sequences; 48,876,257 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq4 102 3e-16 seq16 100 1e-15 seq26 84.2 9e-11 >seq4 Length=1888314 Score = 102 bits (112), Expect = 3e-16 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || || ||||| || ||||||| || ||||| ||||| || |||||||| || Sbjct 716342 ATGCAGATCTTTGTTAAGACTTTGACTGGAAAGACTATCACTCTGGAGGTTGAATCTTCG 716283 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | ||| || | | || || ||||| |||||||| || || || || || || Sbjct 716282 GACACCATCGACAATGTCAAGTCCAAGATTCAGGATAAGGAGGGCATCCCACCCGACCAG 716223 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || | | || ||| | || || ||||||||||| || | |||||| | ||||| || Sbjct 716222 CAGAGACTTATCTTCGCTGGTAAGCAACTTGAAGACGGCCGCACTTTGTCAGATTACAAC 716163 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGT 391258 ||| | ||||| | || ||||| || || Sbjct 716162 ATTCAAAAGGAGTCGACTCTTCATTTGGT 716134 >seq16 Length=1327714 Score = 100 bits (110), Expect = 1e-15 Identities = 145/205 (71%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 391048 TAATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCAT 391107 || |||||| ||||| || || || || || || ||||| || || || || || || | Sbjct 332308 TATTGAATAGCTTCGTCAAGACCCTCACGGGCAAGACTATCACACTCGAGGTGGAGTCTT 332249 Query 391108 CTGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATC 391167 | |||| ||| || | | || ||||| ||||| |||||||||||||| || || | Sbjct 332248 CCGATACCATCGACAATGTCAAGTCCAAAATCCAAGACAAGGAAGGAATTCCACCCGACC 332189 Query 391168 AACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATA 391227 ||||||| | || ||| | || || ||||| || ||||| | ||| | | ||||| | Sbjct 332188 AACAACGCCTGATCTTCGCTGGCAAGCAACTCGAGGATGGCCGCACTCTCTCCGATTACA 332129 Query 391228 ATATTGATAAGGATGCAACACTTCA 391252 | || | ||||| | || ||||| Sbjct 332128 ACATCCAGAAGGAGTCGACTCTTCA 332104 >seq26 Length=969302 Score = 84.2 bits (92), Expect = 9e-11 Identities = 127/181 (70%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 391059 TTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCTGATAACATT 391118 ||||| || || || || || || || || |||||||| || || || || |||| || Sbjct 292092 TTCGTCAAGACCCTTACGGGCAAGACCATCACTCTTGAGGTCGAGTCCTCCGATACTATC 292151 Query 391119 GAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAACAACGTTTA 391178 || | | || || || || || ||||| |||||||| || || ||||| ||||| Sbjct 292152 GACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCACCGGACCAACAGCGTTTG 292211 Query 391179 ATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAATATTGATAAG 391238 || || | || || |||||||||||||| | || | | |||||||| || | ||| Sbjct 292212 ATCTTTGCCGGAAAGCAACTTGAAGATGGCCGTACCCTCTCCGATTATAACATCCAAAAG 292271 Query 391239 G 391239 | Sbjct 292272 G 292272 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975716602713668