Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialocephala_20scopiformis_20[genbank_20GCA_5F001500285.1_202016-
01-07] 71 sequences; 48,876,257 total letters
Query= NC_014637.1
Length=617453
Score E
Sequences producing significant alignments: (Bits) Value
seq4 102 3e-16
seq16 100 1e-15
seq26 84.2 9e-11
>seq4
Length=1888314
Score = 102 bits (112), Expect = 3e-16
Identities = 148/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | || || ||||| || ||||||| || ||||| ||||| || |||||||| ||
Sbjct 716342 ATGCAGATCTTTGTTAAGACTTTGACTGGAAAGACTATCACTCTGGAGGTTGAATCTTCG 716283
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|| | ||| || | | || || ||||| |||||||| || || || || || ||
Sbjct 716282 GACACCATCGACAATGTCAAGTCCAAGATTCAGGATAAGGAGGGCATCCCACCCGACCAG 716223
Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229
|| | | || ||| | || || ||||||||||| || | |||||| | ||||| ||
Sbjct 716222 CAGAGACTTATCTTCGCTGGTAAGCAACTTGAAGACGGCCGCACTTTGTCAGATTACAAC 716163
Query 391230 ATTGATAAGGATGCAACACTTCACTTAGT 391258
||| | ||||| | || ||||| || ||
Sbjct 716162 ATTCAAAAGGAGTCGACTCTTCATTTGGT 716134
>seq16
Length=1327714
Score = 100 bits (110), Expect = 1e-15
Identities = 145/205 (71%), Gaps = 0/205 (0%)
Strand=Plus/Minus
Query 391048 TAATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCAT 391107
|| |||||| ||||| || || || || || || ||||| || || || || || || |
Sbjct 332308 TATTGAATAGCTTCGTCAAGACCCTCACGGGCAAGACTATCACACTCGAGGTGGAGTCTT 332249
Query 391108 CTGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATC 391167
| |||| ||| || | | || ||||| ||||| |||||||||||||| || || |
Sbjct 332248 CCGATACCATCGACAATGTCAAGTCCAAAATCCAAGACAAGGAAGGAATTCCACCCGACC 332189
Query 391168 AACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATA 391227
||||||| | || ||| | || || ||||| || ||||| | ||| | | ||||| |
Sbjct 332188 AACAACGCCTGATCTTCGCTGGCAAGCAACTCGAGGATGGCCGCACTCTCTCCGATTACA 332129
Query 391228 ATATTGATAAGGATGCAACACTTCA 391252
| || | ||||| | || |||||
Sbjct 332128 ACATCCAGAAGGAGTCGACTCTTCA 332104
>seq26
Length=969302
Score = 84.2 bits (92), Expect = 9e-11
Identities = 127/181 (70%), Gaps = 0/181 (0%)
Strand=Plus/Plus
Query 391059 TTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCTGATAACATT 391118
||||| || || || || || || || || |||||||| || || || || |||| ||
Sbjct 292092 TTCGTCAAGACCCTTACGGGCAAGACCATCACTCTTGAGGTCGAGTCCTCCGATACTATC 292151
Query 391119 GAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAACAACGTTTA 391178
|| | | || || || || || ||||| |||||||| || || ||||| |||||
Sbjct 292152 GACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCACCGGACCAACAGCGTTTG 292211
Query 391179 ATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAATATTGATAAG 391238
|| || | || || |||||||||||||| | || | | |||||||| || | |||
Sbjct 292212 ATCTTTGCCGGAAAGCAACTTGAAGATGGCCGTACCCTCTCCGATTATAACATCCAAAAG 292271
Query 391239 G 391239
|
Sbjct 292272 G 292272
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1975716602713668
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |