Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialocephala_20scopiformis_20[genbank_20GCA_5F001500285.1_202016- 01-07] 71 sequences; 48,876,257 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq4 122 7e-22 seq1 89.7 4e-12 >seq4 Length=1888314 Score = 122 bits (134), Expect = 7e-22 Identities = 468/730 (64%), Gaps = 4/730 (1%) Strand=Plus/Minus Query 517985 TTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCTCCC 518044 ||||||||||| || | |||| | | ||||| | || || || || || || ||| Sbjct 923936 TTTCTCTTGAACTCATTAACAAAGTGGTTAACAAGTCTGTTGTCGAAGTCCTCGCCACCC 923877 Query 518045 AATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGA 518104 || | ||| | || | || | | || | ||| | || || |||| | ||| || Sbjct 923876 AAGTGAGTGTCACCAGCAGTGGACTTGACCTCGAAGATACCCTCCTCAATGGTCAAGAGG 923817 Query 518105 GTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGG 518164 | ||||| ||||||||||| | ||| || || || ||||| ||| || Sbjct 923816 GAAACATCGAAAGTTCCACCACCAAGATCGAAGATGAGAACATTGCGTTCACCTTCAACC 923757 Query 518165 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 518224 || || || |||||||| |||| || || || |||||||| || || ||||||| ||| Sbjct 923756 TTCTTGTCGAGACCATAGGCAATGGCGGCTGCGGTTGGTTCGTTGATGATTCTCAGGACA 923697 Query 518225 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 518284 || ||||| || || || ||||| || |||||||| | |||||||||| | || || Sbjct 923696 TTGAGACCGGCGATCAGACCAGCATCCTTTGTGGCTTGACGTTGTGAATCGGTGAAGTAG 923637 Query 518285 GCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAAGCGCTTGCCGTTTGT 518344 || || ||||| | || || | | || | ||||| || || || || | Sbjct 923636 GCTGGGACAGTGACGACAGCGTTGTTGACAGTTCCACCAAGGTATGCCTCCGCAGTCTCA 923577 Query 518345 TTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGGGAATATTGCTTGGATTCA-TT 518403 ||| || || | ||| || || |||| || || | ||||||| ||| Sbjct 923576 CGCATCTTGACCAAGACCATCGAAGAGATTTCCTCAGGTGTGAATTGCTTCTTCTCACCC 923517 Query 518404 TTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATAACTTTAAATGGCCAGTA 518463 |||| | | ||||||| ||| || || | || || | ||||| ||| Sbjct 923516 TTGAACTCA-ACTTCAATGACTGGCTTTCCGGCACGGTCGATGACAGTGAATGGGAAGTG 923458 Query 518464 TTTCATATCTGATTGAACACTTTG-GTCATTAAAATCTCTACCAATTAATCGTTTTGCAT 518522 |||||||| | ||||| || | ||| || | | || || || || || |||| Sbjct 923457 CTTCATATCAGCCTGAAC-CTCAGCATCAGCGAACTTGCGTCCGATCAAACGCTTGGCAT 923399 Query 518523 CAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTCCAATCAGAT 518582 | || | |||||| || || || || |||| | ||||| |||||||| |||||| Sbjct 923398 CGAAGACTGTATTGTGAGGGTTCATGGCGACTTGGTTCTTGGCGGCATCTCCGATCAGAC 923339 Query 518583 GTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAA 518642 | || || || || || | ||| | || || || || || || || || || || |||| Sbjct 923338 GCTCAGTGTCGGTGAAGGCAACGAAGGAAGGTGTGGTTCGGTTTCCCTGGTCGTTGGCAA 923279 Query 518643 TAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAA 518702 | ||||| | | | ||| | | | ||| || || | | || ||||| | ||| | Sbjct 923278 TGATTTCGATTCGATCATCGCGGAAGATACCAACGCAGGAATAGGTAGTTCCCAGATCGA 923219 Query 518703 TACCAATAGC 518712 |||| || || Sbjct 923218 TACCTATCGC 923209 >seq1 Length=2762476 Score = 89.7 bits (98), Expect = 4e-12 Identities = 85/109 (78%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 671659 TGAATTTTTCTTCCAAGTAATGGCAGGTCGTGAAGGTATTATTAATACGGCTATTAAAAC 671718 |||||| |||||||| | |||||| |||||||||||| ||||| |||| ||| | || || Sbjct 1592119 TGAATTCTTCTTCCATGCAATGGCTGGTCGTGAAGGTCTTATTGATACTGCTGTCAAGAC 1592178 Query 671719 TGCTGATACTGGTTATATTCAAAGAAAACTTGTTAAAATGCTCGAAGAT 671767 ||| || |||||||| || ||| | ||||| || ||||||||| Sbjct 1592179 TGCCGAAACTGGTTACATCCAACGTCGTCTTGTCAAGGCTCTCGAAGAT 1592227 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780818876746126