Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialocephala_20scopiformis_20[genbank_20GCA_5F001500285.1_202016- 01-07] 71 sequences; 48,876,257 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq4 282 5e-71 seq1 178 2e-39 seq21 143 3e-29 seq26 102 1e-16 >seq4 Length=1888314 Score = 282 bits (312), Expect = 5e-71 Identities = 484/694 (70%), Gaps = 10/694 (1%) Strand=Plus/Minus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||| || || ||||||||||| || || || || || | ||||| || |||||||| Sbjct 923894 TCGAAGTCCTCGCCACCCAAGTGAGTGTCACCAGCAGTGGACTTGACCTCGAAGATACCC 923835 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 | |||||| | || | |||||||| || || |||||||| || || || ||||| || Sbjct 923834 TCCTCAATGGTCAAGAGGGAAACATCGAAAGTTCCACCACCAAGATCGAAGATGAGAACA 923775 Query 7577 TT-CGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTC 7635 || ||| || | || ||||| |||||||| || || || || || || |||||||| Sbjct 923774 TTGCGT-TCACCTTCAACCTTCTTGTCGAGACCATAGGCAATGGCGGCTGCGGTTGGTTC 923716 Query 7636 ATTAATAATACGAAG-ACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTC 7694 || || || | || ||| || || || || || | ||||| || || ||||| | Sbjct 923715 GTTGATGATTCTCAGGACA-TTGAGACCGGCGATCAGACCAGCATCCTTTGTGGCTTGAC 923657 Query 7695 GTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGA 7754 |||| |||||| | |||||||| ||||| || ||||| |||| |||| | ||| | Sbjct 923656 GTTGTGAATCGGTGAAGTAGGCTGGGACAGTGACGACAGCGTTGTTGACAGTTCCACCAA 923597 Query 7755 GATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCG 7814 | || | ||||| | || ||| ||| | |||||||| || || || |||| | Sbjct 923596 GGTATGCCTCCGCAGTCTCACGCATCTTGACCAAGACCATCGAAGAGATTTCCTCAGGTG 923537 Query 7815 CAAACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGG 7874 || || ||| | ||||| || || ||||||||||| | || || |||| |||| | Sbjct 923536 TGAATTGCTTCTTCTCACCCTTGAACTCAACTTCAATGACTGGCTT-TCCG--GCACGGT 923480 Query 7875 GGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTC 7934 ||| || | | | | | |||||||| | || |||| || | ||||| | Sbjct 923479 CGATGACAGTGAATGGGAAGTGCTTCATATCAGCCTGAACCTCAGCATCAGCGAACTTGC 923420 Query 7935 TTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCT 7994 |||||| | |||||| ||||| || ||||| || | ||||||||||| |||||||| Sbjct 923419 GTCCGATCAAACGCTTGGCATCGAAGACTGTATTGTGAGGGTTCATGGCGACTTGGTTCT 923360 Query 7995 TCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCG 8054 | || || || ||||| ||||| || | | || || || || ||| | || || || | Sbjct 923359 TGGCGGCATCTCCGATCAGACGCTC---AGTGTCGGTGAAGGCAACGAAGGAAGGTGTGG 923303 Query 8055 TTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGC 8114 |||| || || |||||||| ||||| ||||| | || || | | ||| || |||| Sbjct 923302 TTCGGTTTCCCTGGTCGTTGGCAATGATTTCGATTCGATCATCGCGGAAGATACCAACGC 923243 Query 8115 ACGAATACGTTGTTCCTAAATCAATACCGATTGC 8148 | ||||| || ||||| | ||| ||||| || || Sbjct 923242 AGGAATAGGTAGTTCCCAGATCGATACCTATCGC 923209 >seq1 Length=2762476 Score = 178 bits (196), Expect = 2e-39 Identities = 369/544 (68%), Gaps = 13/544 (2%) Strand=Plus/Minus Query 7244 AGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAA 7303 || |||||||| | ||||||||||| | || ||| || |||| ||| | || ||| Sbjct 1796957 AGGTCCTCAAATCTGGCACGGGTAATTTGGGCATTGAAGTCCTCGCCATCGAACAAGGAA 1796898 Query 7304 TCAATTTCAATGGTTGTTTGTG--CCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACG 7361 ||||| |||| || ||||| | || | | || | |||| ||| || ||||| || | Sbjct 1796897 TCAATCTCAACAGTAGTTTGAGCACCATTG--GAAAGAGTTCTCTTGGCACGCTCGCAAG 1796840 Query 7362 CCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGT-TTACGT 7420 | || || | ||| ||||||||||| |||| ||| || || ||||| ||| || | | Sbjct 1796839 CAGTACGGAGACGTCGAAGGGCACGGGGGTCGTTGGACATGTCCTTCTT-TGTCTTTCTT 1796781 Query 7421 TTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGT 7480 | || || | |||||| ||| | | | ||||||||| | || || | ||| Sbjct 1796780 TGGAATTCCTTCTTGAAGTGCTCAAGCAAGTTGGTATCGAAATCCTGTCCGCCGAGGTGG 1796721 Query 7481 GTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACA 7540 ||||| || ||||| || |||||| |||| ||| || | ||||| | | || ||| Sbjct 1796720 GTATCACCAGCGGTAGCCTTGACTGTGAAGACACCACCCTGGATGTTGAGAAGAGACACA 1796661 Query 7541 TCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTT- 7599 || || || || ||||| || || | || || ||||| | || | | || | | || Sbjct 1796660 TCGAAAGTTCCGCCACCGAGATCGTAGATCAGAACGTT--TCTCTCCTTGTTGGATTTTC 1796603 Query 7600 ----ATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGT 7655 | | ||||| || |||||||| || || || || || || || |||||||| || Sbjct 1796602 CGGCACCAAGACCATATGCGATAGCAGCGGCAGTAGGCTCGTTGATGATACGAAGGACGT 1796543 Query 7656 TCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGG 7715 | || ||||| |||| | ||||| || || ||||| ||||| ||||| ||||||| Sbjct 1796542 TGAGACCAGCGATAGCACCGGCATCCTTGGTAGCTTGACGTTGGTTGTCGTTGAAGTAGG 1796483 Query 7716 CCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTT 7775 | ||||| || | || || | | || ||||| || || | ||| |||| || | Sbjct 1796482 CGGGGACGGTAATAACAGCCTTAGAAACCTTCTTGCCAAGCTTGACTTCGGCGACTTCCT 1796423 Query 7776 TCAT 7779 |||| Sbjct 1796422 TCAT 1796419 >seq21 Length=1136343 Score = 143 bits (158), Expect = 3e-29 Identities = 255/370 (69%), Gaps = 13/370 (4%) Strand=Plus/Plus Query 7447 GAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTC 7506 || |||| |||||||||||| || |||||||| ||||| || || || | || || Sbjct 836957 GACTCTCTGATCGAAATCTTCTCCTCCCAAGTGGGTATCACCGGCTGTAGACAGAACCTC 837016 Query 7507 AAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAG---GTC 7563 || | ||| | || ||| | | |||||||| || || || ||||| || || Sbjct 837017 GAAAACACCACGGTCGATGGAGAGGAGAGAAACATCGAAGGTTCCTCCACCAAGATCGTA 837076 Query 7564 AAAAATGAGT--ACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCC 7621 | ||||| | |||||| | |||| |||||| || | ||||| |||||||| Sbjct 837077 GACAATGATTTGACGTTC--ACCGTC------GTTCTTGTCCAAGCCGTATGCGATAGCT 837128 Query 7622 GCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCT 7681 || || || ||||| || | ||||| || ||||| || ||||| | | ||||| Sbjct 837129 GCGGCGGTAGGTTCGTTGACGATACGGAGGACGTTCAAACCGGCAATGATACCGGCATCC 837188 Query 7682 TTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTG 7741 || || ||||||| || ||||| |||||||| || || || || || |||| || Sbjct 837189 TTGGTAGCTTGTCTCTGGTTGTCGTTGAAGTAGGCTGGAACAGTAACAACTGCGTGGGTA 837248 Query 7742 ACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAA 7801 || || || |||||||| ||||| || | ||| ||||| || ||||| ||| | || Sbjct 837249 ACCTTGTTTCCGAGATATGATTCGGCTACATCCTTCATCTTTCCAAGAATCATGGCCGAG 837308 Query 7802 ATCTCTTCAG 7811 ||||| |||| Sbjct 837309 ATCTCCTCAG 837318 >seq26 Length=969302 Score = 102 bits (112), Expect = 1e-16 Identities = 223/329 (68%), Gaps = 10/329 (3%) Strand=Plus/Plus Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515 ||||||||||||||| |||||||| ||||| || ||| | ||||| || || | || Sbjct 82139 ATCGAAATCTTCACCTCCCAAGTGGGTATCACCGTTGGTGGACTTGACCTCGAAAACGCC 82198 Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTAC 7575 || || | | | || | ||| || || || ||||| || || | || | | Sbjct 82199 CTTTTGTATCTCGAGAACTGAGATATCGAAAGTTCCTCCACCAAGATCGTA---GACTGC 82255 Query 7576 GTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTC 7635 | | ||| | ||| | | ||| || |||||||| || | ||| || || || ||||| Sbjct 82256 GAT--GATC-TTGTCCTCATCCTTCTCAAGACCGTAAGCAAGAGCGGCGGCAGTGGGTTC 82312 Query 7636 ATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTG--CCGCATCTTTCGTCGCTTGT 7693 ||| | || |||||| ||| || ||||| || ||| | ||||| || || |||||| Sbjct 82313 ATTGACAACACGAAGGACGTTGAGACCAGCGAT--TTGACCAGCATCCTTGGTAGCTTGT 82370 Query 7694 CGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCG 7753 | || || ||||| || || || ||||| || ||||| |||| | || | ||| | Sbjct 82371 CTCTGGGAGTCGTTGAAATAAGCAGGGACGGTGACGACGGCGTTCTGGATTGGCTTGGTG 82430 Query 7754 AGATACGATTCCGCGATATCTTTCATTTT 7782 || || || || || | || ||||| || Sbjct 82431 AGGTAAGACTCTGCAGTCTCCTTCATCTT 82459 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635132236319640