Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialocephala_20scopiformis_20[genbank_20GCA_5F001500285.1_202016-
01-07] 71 sequences; 48,876,257 total letters
Query= NC_014765.1
Length=198519
Score E
Sequences producing significant alignments: (Bits) Value
seq4 282 5e-71
seq1 178 2e-39
seq21 143 3e-29
seq26 102 1e-16
>seq4
Length=1888314
Score = 282 bits (312), Expect = 5e-71
Identities = 484/694 (70%), Gaps = 10/694 (1%)
Strand=Plus/Minus
Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516
||||| || || ||||||||||| || || || || || | ||||| || ||||||||
Sbjct 923894 TCGAAGTCCTCGCCACCCAAGTGAGTGTCACCAGCAGTGGACTTGACCTCGAAGATACCC 923835
Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576
| |||||| | || | |||||||| || || |||||||| || || || ||||| ||
Sbjct 923834 TCCTCAATGGTCAAGAGGGAAACATCGAAAGTTCCACCACCAAGATCGAAGATGAGAACA 923775
Query 7577 TT-CGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTC 7635
|| ||| || | || ||||| |||||||| || || || || || || ||||||||
Sbjct 923774 TTGCGT-TCACCTTCAACCTTCTTGTCGAGACCATAGGCAATGGCGGCTGCGGTTGGTTC 923716
Query 7636 ATTAATAATACGAAG-ACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTC 7694
|| || || | || ||| || || || || || | ||||| || || ||||| |
Sbjct 923715 GTTGATGATTCTCAGGACA-TTGAGACCGGCGATCAGACCAGCATCCTTTGTGGCTTGAC 923657
Query 7695 GTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGA 7754
|||| |||||| | |||||||| ||||| || ||||| |||| |||| | ||| |
Sbjct 923656 GTTGTGAATCGGTGAAGTAGGCTGGGACAGTGACGACAGCGTTGTTGACAGTTCCACCAA 923597
Query 7755 GATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCG 7814
| || | ||||| | || ||| ||| | |||||||| || || || |||| |
Sbjct 923596 GGTATGCCTCCGCAGTCTCACGCATCTTGACCAAGACCATCGAAGAGATTTCCTCAGGTG 923537
Query 7815 CAAACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGG 7874
|| || ||| | ||||| || || ||||||||||| | || || |||| |||| |
Sbjct 923536 TGAATTGCTTCTTCTCACCCTTGAACTCAACTTCAATGACTGGCTT-TCCG--GCACGGT 923480
Query 7875 GGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTC 7934
||| || | | | | | |||||||| | || |||| || | ||||| |
Sbjct 923479 CGATGACAGTGAATGGGAAGTGCTTCATATCAGCCTGAACCTCAGCATCAGCGAACTTGC 923420
Query 7935 TTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCT 7994
|||||| | |||||| ||||| || ||||| || | ||||||||||| ||||||||
Sbjct 923419 GTCCGATCAAACGCTTGGCATCGAAGACTGTATTGTGAGGGTTCATGGCGACTTGGTTCT 923360
Query 7995 TCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCG 8054
| || || || ||||| ||||| || | | || || || || ||| | || || || |
Sbjct 923359 TGGCGGCATCTCCGATCAGACGCTC---AGTGTCGGTGAAGGCAACGAAGGAAGGTGTGG 923303
Query 8055 TTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGC 8114
|||| || || |||||||| ||||| ||||| | || || | | ||| || ||||
Sbjct 923302 TTCGGTTTCCCTGGTCGTTGGCAATGATTTCGATTCGATCATCGCGGAAGATACCAACGC 923243
Query 8115 ACGAATACGTTGTTCCTAAATCAATACCGATTGC 8148
| ||||| || ||||| | ||| ||||| || ||
Sbjct 923242 AGGAATAGGTAGTTCCCAGATCGATACCTATCGC 923209
>seq1
Length=2762476
Score = 178 bits (196), Expect = 2e-39
Identities = 369/544 (68%), Gaps = 13/544 (2%)
Strand=Plus/Minus
Query 7244 AGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAA 7303
|| |||||||| | ||||||||||| | || ||| || |||| ||| | || |||
Sbjct 1796957 AGGTCCTCAAATCTGGCACGGGTAATTTGGGCATTGAAGTCCTCGCCATCGAACAAGGAA 1796898
Query 7304 TCAATTTCAATGGTTGTTTGTG--CCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACG 7361
||||| |||| || ||||| | || | | || | |||| ||| || ||||| || |
Sbjct 1796897 TCAATCTCAACAGTAGTTTGAGCACCATTG--GAAAGAGTTCTCTTGGCACGCTCGCAAG 1796840
Query 7362 CCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGT-TTACGT 7420
| || || | ||| ||||||||||| |||| ||| || || ||||| ||| || | |
Sbjct 1796839 CAGTACGGAGACGTCGAAGGGCACGGGGGTCGTTGGACATGTCCTTCTT-TGTCTTTCTT 1796781
Query 7421 TTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGT 7480
| || || | |||||| ||| | | | ||||||||| | || || | |||
Sbjct 1796780 TGGAATTCCTTCTTGAAGTGCTCAAGCAAGTTGGTATCGAAATCCTGTCCGCCGAGGTGG 1796721
Query 7481 GTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACA 7540
||||| || ||||| || |||||| |||| ||| || | ||||| | | || |||
Sbjct 1796720 GTATCACCAGCGGTAGCCTTGACTGTGAAGACACCACCCTGGATGTTGAGAAGAGACACA 1796661
Query 7541 TCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTT- 7599
|| || || || ||||| || || | || || ||||| | || | | || | | ||
Sbjct 1796660 TCGAAAGTTCCGCCACCGAGATCGTAGATCAGAACGTT--TCTCTCCTTGTTGGATTTTC 1796603
Query 7600 ----ATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGT 7655
| | ||||| || |||||||| || || || || || || || |||||||| ||
Sbjct 1796602 CGGCACCAAGACCATATGCGATAGCAGCGGCAGTAGGCTCGTTGATGATACGAAGGACGT 1796543
Query 7656 TCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGG 7715
| || ||||| |||| | ||||| || || ||||| ||||| ||||| |||||||
Sbjct 1796542 TGAGACCAGCGATAGCACCGGCATCCTTGGTAGCTTGACGTTGGTTGTCGTTGAAGTAGG 1796483
Query 7716 CCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTT 7775
| ||||| || | || || | | || ||||| || || | ||| |||| || |
Sbjct 1796482 CGGGGACGGTAATAACAGCCTTAGAAACCTTCTTGCCAAGCTTGACTTCGGCGACTTCCT 1796423
Query 7776 TCAT 7779
||||
Sbjct 1796422 TCAT 1796419
>seq21
Length=1136343
Score = 143 bits (158), Expect = 3e-29
Identities = 255/370 (69%), Gaps = 13/370 (4%)
Strand=Plus/Plus
Query 7447 GAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTC 7506
|| |||| |||||||||||| || |||||||| ||||| || || || | || ||
Sbjct 836957 GACTCTCTGATCGAAATCTTCTCCTCCCAAGTGGGTATCACCGGCTGTAGACAGAACCTC 837016
Query 7507 AAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAG---GTC 7563
|| | ||| | || ||| | | |||||||| || || || ||||| || ||
Sbjct 837017 GAAAACACCACGGTCGATGGAGAGGAGAGAAACATCGAAGGTTCCTCCACCAAGATCGTA 837076
Query 7564 AAAAATGAGT--ACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCC 7621
| ||||| | |||||| | |||| |||||| || | ||||| ||||||||
Sbjct 837077 GACAATGATTTGACGTTC--ACCGTC------GTTCTTGTCCAAGCCGTATGCGATAGCT 837128
Query 7622 GCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCT 7681
|| || || ||||| || | ||||| || ||||| || ||||| | | |||||
Sbjct 837129 GCGGCGGTAGGTTCGTTGACGATACGGAGGACGTTCAAACCGGCAATGATACCGGCATCC 837188
Query 7682 TTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTG 7741
|| || ||||||| || ||||| |||||||| || || || || || |||| ||
Sbjct 837189 TTGGTAGCTTGTCTCTGGTTGTCGTTGAAGTAGGCTGGAACAGTAACAACTGCGTGGGTA 837248
Query 7742 ACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAA 7801
|| || || |||||||| ||||| || | ||| ||||| || ||||| ||| | ||
Sbjct 837249 ACCTTGTTTCCGAGATATGATTCGGCTACATCCTTCATCTTTCCAAGAATCATGGCCGAG 837308
Query 7802 ATCTCTTCAG 7811
||||| ||||
Sbjct 837309 ATCTCCTCAG 837318
>seq26
Length=969302
Score = 102 bits (112), Expect = 1e-16
Identities = 223/329 (68%), Gaps = 10/329 (3%)
Strand=Plus/Plus
Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515
||||||||||||||| |||||||| ||||| || ||| | ||||| || || | ||
Sbjct 82139 ATCGAAATCTTCACCTCCCAAGTGGGTATCACCGTTGGTGGACTTGACCTCGAAAACGCC 82198
Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTAC 7575
|| || | | | || | ||| || || || ||||| || || | || | |
Sbjct 82199 CTTTTGTATCTCGAGAACTGAGATATCGAAAGTTCCTCCACCAAGATCGTA---GACTGC 82255
Query 7576 GTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTC 7635
| | ||| | ||| | | ||| || |||||||| || | ||| || || || |||||
Sbjct 82256 GAT--GATC-TTGTCCTCATCCTTCTCAAGACCGTAAGCAAGAGCGGCGGCAGTGGGTTC 82312
Query 7636 ATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTG--CCGCATCTTTCGTCGCTTGT 7693
||| | || |||||| ||| || ||||| || ||| | ||||| || || ||||||
Sbjct 82313 ATTGACAACACGAAGGACGTTGAGACCAGCGAT--TTGACCAGCATCCTTGGTAGCTTGT 82370
Query 7694 CGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCG 7753
| || || ||||| || || || ||||| || ||||| |||| | || | ||| |
Sbjct 82371 CTCTGGGAGTCGTTGAAATAAGCAGGGACGGTGACGACGGCGTTCTGGATTGGCTTGGTG 82430
Query 7754 AGATACGATTCCGCGATATCTTTCATTTT 7782
|| || || || || | || ||||| ||
Sbjct 82431 AGGTAAGACTCTGCAGTCTCCTTCATCTT 82459
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 635132236319640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |