Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialocephala_20scopiformis_20[genbank_20GCA_5F001500285.1_202016-
01-07] 71 sequences; 48,876,257 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq42 260 2e-64
seq4 147 3e-30
>seq42
Length=298824
Score = 260 bits (288), Expect = 2e-64
Identities = 1185/1829 (65%), Gaps = 81/1829 (4%)
Strand=Plus/Minus
Query 111546 TATTTTGGTCTCAAGACCCTCGAGAAAAGCTACCTCCAAAGACTGGATGGTGTCTTGATG 111605
|| ||||| ||||||| |||||| | ||||||| | || |||| | |||
Sbjct 243394 TACTTTGGCTTCAAGACTCTCGAGCGATCATACCTCCTCCGCCTCAATGG---CAAGATC 243338
Query 111606 ---GAAACCCCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATT 111662
||| |||||| ||||| | ||||| || || |||| || || || ||||||||
Sbjct 243337 TGCGAACGCCCACAACACATGATTATGCGAGTAGCAGTCGGCATTCACGGTGAAGATATC 243278
Query 111663 GATTCTGTTTTGGAGACATACGACAAGATGTCCCGTGGTATG-TTCATCCACGCAACACC 111721
|| ||| | ||||||||| | |||||||| | || |||| || || | ||
Sbjct 243277 GAGGCTGCGATTGAGACATACAATCTGATGTCCCA-GAAGTGCTTCACGCATGCTTCCCC 243219
Query 111722 AACCCTCTTCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAA 111781
||| |||||| |||||||| ||| | ||||| | || ||||||||| | | |
Sbjct 243218 AACTCTCTTCGCTGCTGGTACTCCACAAGCCCAACTCTCTTCATGTTTCCTTGTCGACAT 243159
Query 111782 CAAGGAGGATTCAATCAATGGCATTTACGGCACTCTCACTGAA----TGTGCCCAAATCT 111837
|||||||| ||| | || || |||| ||| | |||| || ||| || |
Sbjct 243158 GAAGGAGGACAGTATCGACGGTATCTACGACAC----ATTGAAGACTTGCGCCATGATTT 243103
Query 111838 CAAAGTGGGCTGGTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACA-AGTCTCGT 111896
| ||| |||||||| || || | || | ||| || | || | | || ||
Sbjct 243102 CCAAGAATGCTGGTGGAATTGGCCTCAACGTTCATCGAATCCGCGCTACCGGAGCCTAC- 243044
Query 111897 ATTAGAGGTACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCC 111956
||| ||| ||||||||| | || | || || | || ||||| || || || ||| |
Sbjct 243043 ATTGCAGGAACAAATGGTAACTCGAACGGCATCGTCCCCATGCTCCGAGTCTTCAACAAC 242984
Query 111957 ACAGCGCGCTATGTAAACCAAGCTGGGCGTCGCAAGGGATC------TATCGCAGTCTAT 112010
|| || || || || |||||| ||| | |||| || | | |||| |||||
Sbjct 242983 ACTGCTCGTTACGTTGACCAAGGTGG---TAACAAGCGACCAGGTGCTTTCGCTATCTAT 242927
Query 112011 CTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGAT 112070
||||||||||||||||| ||| || | |||| |||||| | || || || || |
Sbjct 242926 CTTGAGCCATGGCACGCCGATGTCTTCGAGTACCTTGATCTTCGAAAGAATCACGGCAAG 242867
Query 112071 GAGGAGGCGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAG 112130
||||||| || || |||||||||| ||| || |||||||| ||||| |||||||||
Sbjct 242866 GAGGAGGTCCGAGCTCGTGATCTCTTCTACGCCCTGTGGATTCCTGATCTTTTCATGAAG 242807
Query 112131 AGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCC 112190
||||||| ||| |||| | ||| || | | || || | || || || | |
Sbjct 242806 CGAGTTGAAAAGAATGGCGAGTGGACTTTGATGTGCCCCAATGAGTGCCCAGGCTTGGCT 242747
Query 112191 GATGCCGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCG 112250
|||| | || || || || || || |||||| |||| ||| ||| || || |
Sbjct 242746 GATGTCTATGGCGATGAATTCGAGGCTCTCTACGAGCAGTATGAGCGCGAAGGTAAGG-G 242688
Query 112251 ACTGC--GACGGTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAG 112307
| || ||| | | || || | | | ||| | | || || || |||| ||||||
Sbjct 242687 TC-GCAAGACCAT-CAAGGCGCAAAAGCTCTGGTACTCCATCCTGGAGGCTCAGACCGAG 242630
Query 112308 ACTGGTACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAAT 112367
||||| | || | ||||||||||| || || || ||| |||||| || || ||||||
Sbjct 242629 ACTGGCAATCCCTTCATGCTTTACAAGGATGCTTGCAACAGAAAGAGCAACCAGAAGAAT 242570
Query 112368 TTGGGTGTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGAT 112427
| ||| ||| || || |||||||| || || || | || | | ||||
Sbjct 242569 CTCGGTACCATCCGAAGCTCGAACCTCTGCACTGAGATTGTTGAGTACTGTGCTCCAGAT 242510
Query 112428 GAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACA 112487
||| || || || ||| | || ||| | || || || | ||||| || || |||
Sbjct 242509 GAGGTTGCCGTCTGCAACTTGGCTTCACTTGCCCTTCCTACCTATGTCGA--CATGAACA 242452
Query 112488 AAG--ACATTTGATTATGAAAAACTCCACGAAGT-TACGAAAAC--TGTCACAAAAAACC 112542
| | || | ||| | | | ||| |||||||| | | || | |||| || |||
Sbjct 242451 ACGGCACTTATGACTTCCAGAGACTTCACGAAGTCTGCCAAGTCGTTGTC---AAGAACT 242395
Query 112543 TAAACAGAGTTATTGATAGAAATTTTTACCCCGTT-GAGACTGCTCGTAAATCTAATATG 112601
| |||| | |||||| || | |||||| ||| || | | || | || |
Sbjct 242394 TGAACAAGATCATTGATGTCAACTATTACCCTGTTCCCGAAGCCAAGAGAAGC-AACTTC 242336
Query 112602 AGACACCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCAT---TCTTTGT 112658
| ||||| || || | | |||||||| ||||| || |||| ||| | |||| ||
Sbjct 242335 CGCCACCGACCTATCGCCGTTGGTGTCCAGGGTCTTGCTGATGCTTTCTTGGCTCTTCGT 242276
Query 112659 CGCCACGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATG 112718
| | |||| || || || || ||| | |||| | || || ||||| ||
Sbjct 242275 CTTC---CATTCGACTCTCCAGAGGCCAAGCACCTCAACATTCAAATCTTCGAGACCATC 242219
Query 112719 TATCACGCCGCTCTTGAGGC--GAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAA 112776
|| || ||||| || || |||| ||| | || |||||||||| | ||||| |
Sbjct 242218 TACCATGCCGCACTCACTGCTTCAGTT--GAGCTTGCCAAGGTTGATGGCACTTATGAGA 242161
Query 112777 CCTTTGAGGGTTCTCCAGCTTCACAAGGG-GTGCTTCAATTTGATATGTGGGAAGGTGAG 112835
| |||||||||||||| || || |||||| | | | || | ||||||||||| || |
Sbjct 242160 CATTTGAGGGTTCTCCTGCCTC-CAAGGGCGAGTTGCAGTATGATATGTGGG-GTGTTAC 242103
Query 112836 ACCAA-GCTTCACTACGACTGGGAC-GCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTC 112893
|||| || || || |||||| ||| | ||| | |||||| | | |||||||
Sbjct 242102 TCCAACAGATCTCTGGGATTGGGACAGCT-TGAAGCAGAAAATCAAGCAACATGGTCTTC 242044
Query 112894 GTAACAGTCTT--TTGATGGCACCAATGCCAACAGCCTCCACCGCACAAA-TCTTGGGTA 112950
| || || ||| ||| | || || |||||||| ||| |||| |||| |||||| |
Sbjct 242043 GCAATAG-CTTGCTTG-TCGCTCCTATGCCAACTGCCAGCACCAGTCAAATTCTTGGCT- 241987
Query 112951 ATAATGAATGCTTTGAACCCTACACGACGAACATCTA-TCTGAGAAGAACCCTCGCGGGA 113009
||||| |||||||| || || ||| | |||||||| ||| | | || || ||
Sbjct 241986 TCAATGAGTGCTTTGAGCCATATACGTCCAACATCTACTCT-CGTCGTGTTCTTGCTGGC 241928
Query 113010 GAGTTTGTGATTGTCAA--CAAGCAT-CTCGTGGATGACCTCAAAGAGATTGGTCTCTGG 113066
||||| | ||||| || | | ||| |||| || || || |||||||||
Sbjct 241927 GAGTTCCAAGTCGTCAACCCATGGTTGCTCAAGGAT---CTTGTTGACATGGGTCTCTGG 241871
Query 113067 TCCAAGGATATGAAGGATCTCATGGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGAT 113126
|| | | |||||| | | || | | ||||| || ||||| || || |
Sbjct 241870 TCTGACAACATGAAGAACCGTATCATTGCCGATGGTGGATCGATTCAGAACATCCCCAAC 241811
Query 113127 ATTCCAGATGAAATTAAGAAGTTGTACCGCACAGTTTGGGAAA--TCAAGATGAAGGATG 113184
|| |||| ||| || ||| | ||| || |||||||||| ||| ||| |
Sbjct 241810 ATCCCAGCTGATATCAAGGCTCTTTACAAGACCGTTTGGGAAATCTCACAGCGAACCA-- 241753
Query 113185 TCATTGACATGGCCGCAGATCGTGGTCGCTT-CATTGATCAAAGTCAAAGTATGAATCTA 113243
|| | | |||||||| || |||||| |||| |||||| ||| ||| ||||| |
Sbjct 241752 TCGTCCAAATGGCCGCTGACCGTGGT-GCTTACATTGACCAATCACAATCGATGAACATT 241694
Query 113244 TTCATGGAAAGTCCAACGATGTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAG 113303
|||| | ||| || ||| |||| || | ||||||| | | |||||| |
Sbjct 241693 CACATGAAGGATCCCACAATGGGCAAGATCACCAGTATGCACTTCGCTGGCTGGAAGTTG 241634
Query 113304 GGTCTCAAAACGGGGATGTATTACCTCCG 113332
||||| ||||| || ||||| || |||||
Sbjct 241633 GGTCTGAAAACTGGCATGTACTATCTCCG 241605
>seq4
Length=1888314
Score = 147 bits (162), Expect = 3e-30
Identities = 170/224 (76%), Gaps = 4/224 (2%)
Strand=Plus/Minus
Query 102110 AGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAAAGTCGC 102168
|||||||||||| | ||||| || || |||||| | |||||| || | |||| | |
Sbjct 1224656 AGTTCCATGTATCAAGAAGAAGGCCGACTGGGCTGTCAAGTGGATTCAAGACAAGAACTC 1224597
Query 102169 GTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTT 102228
| | |||||| | || ||| ||||||| || || ||||||||||||||| |||||
Sbjct 1224596 -TACATTTGCTCAACGTCTCGTCGCATTCGCCGCCGTCGAGGGTATCTTCTTCAGTGGTT 1224538
Query 102229 CCTTCTGCG-CTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCC 102287
||||| ||| | || | ||| | |||||||| ||||| ||| | ||||| |||||||
Sbjct 1224537 CCTTC-GCGTCCATCTTCTGGTTGAAGAAGCGTGGTCTTATGGCTGGTCTTACCTTCTCC 1224479
Query 102288 AACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 102331
|| || || ||||||||||||||||| |||||| || |||||
Sbjct 1224478 AATGAACTCATCTCTCGTGACGAGGGTCTCCACACCGACTTTGC 1224435
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620741849091120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |