Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialocephala_20scopiformis_20[genbank_20GCA_5F001500285.1_202016-
01-07] 71 sequences; 48,876,257 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq42 187 3e-42
seq4 129 7e-25
seq7 93.3 5e-14
seq5 86.0 7e-12
>seq42
Length=298824
Score = 187 bits (206), Expect = 3e-42
Identities = 1168/1844 (63%), Gaps = 63/1844 (3%)
Strand=Plus/Plus
Query 109408 CGAAGATAATACATACCCGTTTTGAGACCAGCCTTCCATGCGTACATATGCATTGAAGAG 109467
|| ||||| ||||| || ||||| ||||| |||||| | | ||||| | |
Sbjct 241605 CGGAGATAGTACATGCCAGTTTTCAGACCCAACTTCCAGCCAGCGAAGTGCATACTGGTG 241664
Query 109468 AGTTTGGAAAGTGTCGGACTCTCCATAAACAAGTTCATCGACTGAGACTGATCGATGAAT 109527
| ||| | ||| ||| || ||| | ||||||||| || || || || ||| |
Sbjct 241665 ATCTTGCCCATTGTGGGATCCTTCATGTGAATGTTCATCGATTGTGATTGGTCAATGTAA 241724
Query 109528 CGACCACGATCAGCCGCCATGT---CGATGATACACTTTTGGCTAATTTCCCAGACAGTC 109584
|||||| ||||| ||||| | ||||| | | || | | |||||||| || |||
Sbjct 241725 GCACCACGGTCAGCGGCCATTTGGACGATGGTTCGCTGTGAG---ATTTCCCAAACGGTC 241781
Query 109585 TTGTACAAATTCTTGATATCATCGGGAATGTCCACGATGTTTTGAATAGAGCCACCAGCC 109644
||||| | | |||||||||| | || |||| |||||| ||||| || |||||| |
Sbjct 241782 TTGTAAAGAGCCTTGATATCAGCTGGGATGTTGGGGATGTTCTGAATCGATCCACCATCG 241841
Query 109645 TTCACCATGAGATCCTTCATCTCTTTCGACCAGAGACCGACCTTTTTGAGAT-CGTCAAC 109703
| || | | |||||| | | ||||||||||| | | |||| | | | |
Sbjct 241842 GCAATGATACGGTTCTTCATGTTGTCAGACCAGAGACCCATGTCAACAAGATCCTTGAGC 241901
Query 109704 AA-GATGCTTGTTGACCACGACAAATTCACCAGCAAGTGTGCGTCGGAGGTAGATGTTAG 109762
|| ||| |||||| || || || |||||||| || || ||||||||| |
Sbjct 241902 AACCATG--GGTTGACGACTTGGAACTCGCCAGCAAGAACACGACGAGAGTAGATGTTGG 241959
Query 109763 TCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGGAAGCTGTGGGCA 109822
||| || || || || ||||||||| ||| || ||||| ||| || || ||||
Sbjct 241960 ACGTATATGGCTCAAAGCACTCATTGAAGCCAAGAATTTGACTGGTGCTGGCAGTTGGCA 242019
Query 109823 TGGGAGCCATGAGAAGACTGTTTCGGAGACC---CTTCGTCTTTACCCGC-TCACGCATT 109878
| ||||| | || | || || || ||||| | | | || | || ||| ||
Sbjct 242020 TAGGAGCGACAAGCAAGCTATTGCGAAGACCATGTTGCTTGATTTTCTGCTTCAAGC--- 242076
Query 109879 GCGTCCCAATCATAACGACCACTAAATTTAGTCTCACCATCCCACATATCTGGTTGAAGT 109938
||||||||| | || | | | ||| | || |||||||||| || |
Sbjct 242077 -TGTCCCAATCCCAGAGATCTGT---TGGAGT---AACACCCCACATATCATACTGCAAC 242129
Query 109939 ACACCCTCAGCAGCAGGAGAACCCTTGAAACTCTCGTACGACCCCTCAACCTCGGCCAAC 109998
| |||| | ||||||||||||| || |||| || | || ||||||| ||| | |
Sbjct 242130 TCGCCCTTGGAGGCAGGAGAACCCTCAAATGTCTCATAAGTGCCATCAACCTTGGCAAGC 242189
Query 109999 TCGGATGAAGCCTCTAGTGCCGCATGATACATAGTCTCAAAAATATGAGCATTCATGAGG 110058
|| |||||| ||||| ||||| || || ||||| || || ||| || | | |
Sbjct 242190 TCAACTGAAGCAGTGAGTGCGGCATGGTAGATGGTCTCGAAGATTTGAATGTTGAGGTGC 242249
Query 110059 CGAGACTCTTCACAGTCGAAGGGAAGACCACAAAG--AATAAACACATCCGCTAGACCCT 110116
| |||| | ||||||| ||||||| | | || || ||| |||| || |||||||
Sbjct 242250 TTGGCCTCTGGAGAGTCGAATGGAAGACGA-AGAGCCAAGAAA-GCATCAGCAAGACCCT 242307
Query 110117 GAACACCGAGACCAATGGGGCGATGCTTCATGTTAGAGCGTCGAGCAGTTTC---TACGG 110173
| ||||| | | || || || || | ||| || || | ||| || |
Sbjct 242308 GGACACCAACGGCGATAGGTCGGTGGCGGAAGTT---GCTTCTCTTGGCTTCGGGAACAG 242364
Query 110174 GGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGTCACAGTCTTCG-TGATTTCA 110232
||||| ||||| || |||| | || | ||||| | || | ||| | || |||
Sbjct 242365 GGTAATAGTTGACATCAATGATCTTGTTCAAGTTCTT-GACAACGACTTGGCAGACTTCG 242423
Query 110233 TGGAGTTTGTCGTAATCGAACGTTTTCGTCTCCTTATTGACATATTTGGGGAGAGCAATA 110292
|| ||| | | | | || | || | | | | | |||||| | || || ||||
Sbjct 242424 TGAAGTCTCTGGAAGTCATAAGTGCCGTTGTTCATGTCGACATAGGTAGGAAGGGCAAGT 242483
Query 110293 GACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAAATTTCCGTACAC 110352
|| || | ||||| || | | ||| ||| | ||| || | ||| || || ||
Sbjct 242484 GAAGCCAAGTTGCAGACGGCAACCTCATCTGGAGCACAGTACTCAACAATCTCAGTGCAG 242543
Query 110353 AAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAGTTGCATGCATCC 110412
| ||| || || ||| ||| | |||||||| || || |||||| ||||||
Sbjct 242544 AGGTTCGAGCTTCGGATGGTACCGAGATTCTTCTGGTTGCTCTTTCTGTTGCAAGCATCC 242603
Query 110413 TTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATGGCCTTCCATA-C 110471
|| || |||||| | || | ||||| || ||||| | || || |||| | ||| | |
Sbjct 242604 TTGTAAAGCATGAAGGGATTGCCAGTCTCGGTCTGAGCCTCCAGGATGGAGTACCAGAGC 242663
Query 110472 ATCGGCGGCGGGGACAG--TTGCGTTAGCGAGACCTTCCTCCTCGTACTTGGTGTACAAG 110529
| || || || | ||||| | | |||||| ||| |||| ||| |
Sbjct 242664 TTTTGC-GCCTTGATGGTCTTGCG--ACCCTTACCTTCGCGCTCATACTGCTCGTAGAGA 242720
Query 110530 TCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGC-CTTGTCGGGACAGAAGAG 110588
|||| ||||| | || || ||||||| | | ||| || || | ||| || | |
Sbjct 242721 GCCTCGAATTCATCGCCATAGACATCAGCCA-AGCCTGGGCACTCATTGGGGCACATCAA 242779
Query 110589 GGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATCCACATCGCCGA 110648
| ||| | ||| || ||||| | ||||||||| || ||||||||||||| || |
Sbjct 242780 AGTCCACTCGCCATTCTTTTCAACTCGCTTCATGAAAAGATCAGGAATCCACAGGGCGTA 242839
Query 110649 GAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCTCCAAAAAGTC 110708
||| || ||||| || |||| || | || || || || || || | | ||
Sbjct 242840 GAAGAGATCACGAGCTCGGACCTCCTCCTTGCCGTGATTCTTTCGAAGATCAAGGTACTC 242899
Query 110709 CATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGA-------TGGATCCCTTACGAC 110761
| || ||| | ||||||||| || ||||||| ||||| ||| || ||| ||
Sbjct 242900 GAAGACATCGGCGTGCCATGGCTCAAGATAGATAGCGAAAGCACCTGG-TCGCTTGTTAC 242958
Query 110762 GACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGGAATAATTC 110821
|| | |||| ||| || || || ||| |||||||| | |||||| || | || |
Sbjct 242959 CAC---CTTGGTCAACGTAACGAGCAGTGTTGTTGAAGACTCGGAGCATGGGGACGATGC 243015
Query 110822 CATCGGATTGACCATTTGTACCCCTAATTCTGGACTTATTGGCACGAATGTCG-TGGATA 110880
| | || | ||||||||| || ||| || | || || || ||| || |
Sbjct 243016 CGTTCGAGTTACCATTTGTTCCTGCAATGTAGGCTCCGGTAGCGCGGAT-TCGATGAACG 243074
Query 110881 TGCATACCAATACCACCCGCCCACTTACTAAT--TTGTGCACACTCTGTGAGTGTACCAT 110938
| | ||||| ||||| || ||| ||| | | ||| | ||| | | ||| | |
Sbjct 243075 TTGAGGCCAATTCCACCAGCATTCTTGGAAATCATGGCGCA-AGTCT-TCAATGTGTCGT 243132
Query 110939 AAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACATCTGAGGAC 110998
| ||||| || || || |||| || | | || || || ||||| | || |
Sbjct 243133 AGATACCGTCGATACTGTCCTCCTTCATGTCGACAAGGAAACATGAAGAGAGTTGGGCTT 243192
Query 110999 GAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAA-CAGACCTTGGGACATC 111057
| || || || ||| |||||| || || | ||||| |||| || | |||||||||
Sbjct 243193 GTGGAGTACCAGCAGCGAAGAGAGTTGGGGAAGCATGCGTGAAGCACTTC-TGGGACATC 243251
Query 111058 TTGTTGTATGTGTCGAGTGCGGAGGGTACATCTTTACCGTGAATACCAATGGCAACTCGC 111117
|||||||| || | || | | ||||| ||||||||| || | || ||||||
Sbjct 243252 AGATTGTATGTCTCAATCGCAGCCTCGATATCTTCACCGTGAATGCCGACTGCTACTCGC 243311
Query 111118 ATGAACATATATTGAGGCGTTTCGATTAGCTTTCCATCAACACGCTGAAGGTAACTCTTC 111177
|| | ||| | ||| || |||| | ||| |||| | || | ||||| |
Sbjct 243312 ATAATCATGTGTTGTGGGCGTTCGCAGATCTTGCCATTGAGGCGGAGGAGGTATGATCGC 243371
Query 111178 TCTAGGGTCTTGAGACCAAAGTATCCAAAATCGAAATCACGATC 111221
|| || ||||||| ||||||||| ||| |||||| || ||
Sbjct 243372 TCGAGAGTCTTGAAGCCAAAGTATTGGTAATTGAAATCTCGGTC 243415
>seq4
Length=1888314
Score = 129 bits (142), Expect = 7e-25
Identities = 335/498 (67%), Gaps = 17/498 (3%)
Strand=Plus/Plus
Query 119208 TAGTCACCCACCCTCTTTTCGAAGAAATTCGTCTTACCATCGAGTGAGATGTTTTCCATA 119267
|||||||| || | ||| || ||||| || ||||| ||| |||| |||||||| ||||||
Sbjct 1224147 TAGTCACCAACGCGCTTCTCAAAGAAGTTAGTCTTGCCAGCGAGCGAGATGTTCTCCATA 1224206
Query 119268 AAGTCAAAAGGATTTTTGGAGTTCCAGAT-TGGTGGTTGACCAACTTGTTTCAGAAGACG 119326
|||||||| || || || || ||| | | ||| || | || |||||
Sbjct 1224207 AAGTCAAATGGGTTGGCAGACTTGTAGACCTTCTCATTG-CCGAGGGCAAGAAGCAGACG 1224265
Query 119327 ATCGGAGACATACTCGATATATTCGGACATCTTTTCCGAATTCATACCTATGAGATTACA 119386
||| | ||| ||||||| |||| |||| | ||| ||||| || | ||| |||
Sbjct 1224266 ATCAGCGACGAACTCGATGTATTGCTTCATCAGATTCGAGTTCATGCCAAGGAGTGCACA 1224325
Query 119387 CGGGAGAGCATCGAGGATGAAGTTCTTCTCGATCTCCACAGCTTCTTTCACGATGGAGTG 119446
|| ||||| || | ||| | | ||| ||||| |||||||| | | || | ||
Sbjct 1224326 AGGAAGAGCCTCAGTCAAGAACTCTTGCTCAATCTCGACAGCTTCGGTAATGACGTCTTG 1224385
Query 119447 AATAGTTTCTGTCGATGGTTTGTTTCTCAAG--AGTTTAAACAACTCTACGGCAAATTCT 119504
| || || | ||| || ||||| || | | || | | ||||| ||
Sbjct 1224386 GACAGCTTGCTTGCTTGGGCGGTGCTTCAAGTGAGAGAAGAGAAGGCAA--GCAAAGTCG 1224443
Query 119505 TGATGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGT 119564
|| || || || || ||||||||||| ||||| |||| ||| |||| ||| ||
Sbjct 1224444 GTGTGGAGACCCTCGTCACGAGAGATGAGTTCATTGGAGAAGGTAAGACCAGCCATAAGA 1224503
Query 119565 CCTCTTTTCTTTAGCCAAAAGATGG-CACAAA--AACTTCCAGAAAAGAAGATGCCCTCC 119621
|| | ||||| | ||| ||||||| | | || || ||| |||||||| |||||
Sbjct 1224504 CCACGCTTCTTCAACCAGAAGATGGACGCGAAGGAA---CCACTGAAGAAGATACCCTCG 1224560
Query 119622 ACACAGGCGAAAGCGAATAGACGCTCAGCAAAAGGTCGAG-ACTTGTC--GAA-CCACTT 119677
|| |||||| |||| ||||| | ||| ||| || ||| |||||| ||| ||||||
Sbjct 1224561 ACGGCGGCGAATGCGACGAGACGTTGAGC-AAATGTAGAGTTCTTGTCTTGAATCCACTT 1224619
Query 119678 GAGAGCCCAGTTGGCCTT 119695
|| |||||||| ||||||
Sbjct 1224620 GACAGCCCAGTCGGCCTT 1224637
>seq7
Length=1615722
Score = 93.3 bits (102), Expect = 5e-14
Identities = 213/318 (67%), Gaps = 2/318 (1%)
Strand=Plus/Minus
Query 11674 TTACCGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCCTGT 11733
|| || | |||||| || ||||||||||| | |||||| || || | |||
Sbjct 424099 TTGCCAATAGCGTCGATTTCATCGATGAAGATGATACATGGAGTATTCTTTCTCGCCATA 424040
Query 11734 TCGAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTGCG 11793
||||| || || || || || |||||||| || ||||| || ||||| | |
Sbjct 424039 GAAAAAAGATCTCGCACTCGTGAAGCACCAACACCAACAAACATTTCCACGAACTCGGAA 423980
Query 11794 GCAGA-ACACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAGT 11852
|| |||||||| ||| ||||| | |||||| ||||| | ||| || | || ||
Sbjct 423979 CCACTGACACTGAA-GAACGGAACCTGAGACTCGCCAGCAGTAGCTTTCGCCAACAGCGT 423921
Query 11853 CTTACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACCACTTCC 11912
|||||| || || || | |||| |||| || || || |||||||||||||| ||
Sbjct 423920 CTTACCAGTTCCTGGAGGTCCAGAAAGAATAGCACCTCGTGGGATCTTGGCACCGAGTCT 423861
Query 11913 AAAGTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCCTCAAGTTCCTCCTTGGCGGA 11972
| | | || ||| |||| | ||| | |||| |||| | ||| |||||||
Sbjct 423860 TTGGAATTGTTCGGGCGTCTTCAAGAAAGCGACAAACTCCATGATTTCAGCCTTGGCTTC 423801
Query 11973 GTCGATACCCTCAACATC 11990
||| ||||| |||||||
Sbjct 423800 GTCCATACCGGCAACATC 423783
>seq5
Length=1787800
Score = 86.0 bits (94), Expect = 7e-12
Identities = 59/67 (88%), Gaps = 0/67 (0%)
Strand=Plus/Minus
Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGTT 136776
||||||||||||||||||||||||||| |||||||||||||| || |||||| || |||
Sbjct 1364771 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGAGTTCGACCCTCGTA 1364712
Query 136777 GGGAACA 136783
| || ||
Sbjct 1364711 GTGATCA 1364705
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588975477283800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |