Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialocephala_20scopiformis_20[genbank_20GCA_5F001500285.1_202016-
01-07] 71 sequences; 48,876,257 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq42 297 2e-75
seq4 113 5e-20
>seq42
Length=298824
Score = 297 bits (328), Expect = 2e-75
Identities = 1195/1829 (65%), Gaps = 81/1829 (4%)
Strand=Plus/Plus
Query 105590 CGGAGATAGTACATCCCGGTCTTGAGTCCTTGTTTCCACGCGTACATATGCATAGAAGAG 105649
|||||||||||||| || || || || || ||||| | | |||||| | |
Sbjct 241605 CGGAGATAGTACATGCCAGTTTTCAGACCCAACTTCCAGCCAGCGAAGTGCATACTGGTG 241664
Query 105650 AGCTTGGACATCGTTGGACTTTCCATGAAAAGATTCATACTTTGACTCTGGTCAATG-AA 105708
| |||| ||| || ||| | |||| || ||||| ||| ||||||||| ||
Sbjct 241665 ATCTTGCCCATTGTGGGATCCTTCATGTGAATGTTCATCGATTGTGATTGGTCAATGTAA 241724
Query 105709 GCGACCACGTTGTGCCGCCATATCAATGACATCCTTCATCTTGA--TTTCCCACACTGTG 105766
|| |||||| | || ||||| | | || | ||| ||| ||||||| || ||
Sbjct 241725 GC-ACCACGGTCAGCGGCCATTTGGACGA--TGGTTCGCTGTGAGATTTCCCAAACGGTC 241781
Query 105767 CGGTAGAGATTCTTGATATCATCTGGGATATCTGAGATATTTTGAATTGAACCCCCCGCC 105826
||| ||| |||||||||| ||||||| | | ||| || ||||| || || || |
Sbjct 241782 TTGTAAAGAGCCTTGATATCAGCTGGGATGTTGGGGATGTTCTGAATCGATCCACCATC- 241840
Query 105827 TTGACCATGAGA---TCCTTCATATCCTTGGACCAAAGACCAATCTTCTTGAGATCATTG 105883
| | |||| | | |||||| | | ||||| ||||| || | ||||| |||
Sbjct 241841 --GGCAATGATACGGTTCTTCATGTTGTCAGACCAGAGACCCATGTCAACAAGATCCTTG 241898
Query 105884 ACGAG--ATGCTTGTTGACAATCACAAACTCTCCCGCGAGGGTTCTTCTCAGA-TAGATG 105940
| | ||| |||||| | ||||| || || || | | ||| ||||||
Sbjct 241899 AGCAACCATGG--GTTGACGACTTGGAACTCGCCAGCAAGAACACGACG-AGAGTAGATG 241955
Query 105941 TTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGA-TTTGTGCGGTGGAGGCTGT 105999
|| | ||| || || |||||||| ||||| | |||||| |||| |||| ||| ||
Sbjct 241956 TTGGACGTATATGGCTCAAAGCACTCATTGA-AGCCAAGAATTTGACTGGTGCTGGCAGT 242014
Query 106000 TGGCATTGGTGCCATCAA--AAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCCTTG 106057
|||||| || || | ||| ||| || || |||||||| | || |||||| | |||
Sbjct 242015 TGGCATAGGAGCGA-CAAGCAAG-CTATTGCGAAGACCATGTTGCTTGATTTTCTGCTTC 242072
Query 106058 AGAACATCCCAGTCGTAGTTGAGCT--TGGTTTCACCTTCCCACATATCAAATTGAAGCA 106115
| ||||| || || || || ||| | || ||||||||||| | || | |
Sbjct 242073 AAGCTGTCCCAATCCCAGA-GATCTGTTGGAGTAACAC-CCCACATATCATACTGCAACT 242130
Query 106116 CCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATT 106175
| || | ||| | ||||||||||||||||||||||| | || | || ||
Sbjct 242131 CGCCCTTGGAGGCAGGAGAACCCTCAAATGTCTCATAAGTGCCAT------CAACCTTGG 242184
Query 106176 CACAGCTCGCCTC---CAGGGA-TGCG---TGATACATGGTTTCAAAGATACGAGCATTC 106228
|| ||||| || ||| || |||| || || ||||| || ||||| || ||
Sbjct 242185 CA-AGCTCAACTGAAGCAGTGAGTGCGGCATGGTAGATGGTCTCGAAGATTTGAATGTTG 242243
Query 106229 ATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAA--AATAAATACATCCGCGA 106286
| | |||||| || || || |||| | || | | | || ||| |||| || |
Sbjct 242244 AGGTGCTTGGCCTCTGGAGAGTCGAATG-GAAGACGAAGAGCCAAGAAAG-CATCAGCAA 242301
Query 106287 GACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTC-A 106345
|||| || ||||| | | ||||||| ||| || | || | | || | || |
Sbjct 242302 GACCCTGGACACCAACGGCGATAGGTCGGTGGCGGAAGTT-GCTTCTCTTGGCTTCGGGA 242360
Query 106346 ACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGT-GAT 106404
|| || ||| | || ||||||| ||| | || ||| ||| | ||| | ||
Sbjct 242361 ACAGGGTAATAGTTGACATCAATGATCTTGTTCAAGTTCTTGACAACGA-CTTGGCAGAC 242419
Query 106405 TTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATT--GACATACTTTGGAAGG 106462
||| |||||| | | | ||| |||||| || | ||||| |||||| | ||||||
Sbjct 242420 TTCGTGAAGTCTCTGGAAGTCATAAGTGCC-GT-TGTTCATGTCGACATAGGTAGGAAGG 242477
Query 106463 GCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCT 106522
|| | ||| ||||| ||||| || || |||||| | | |||||| | ||| ||
Sbjct 242478 GCAAGTGAAGCCAAGTTGCAGACGGCAACCTCATCTGGAGCACAGTACTCAACAATCTCA 242537
Query 106523 GTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCAC 106582
|| || | ||| || || || || || | |||||| ||||| |||||| |||||||
Sbjct 242538 GTGCAGAGGTTCGAGCTTCGGATGGTACCGAGATTCTTCTGGTTGCTCTTTCTGTTGCAA 242597
Query 106583 GCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTC 106642
||||||||||| |||||| |||| | || ||||| ||||| | || || || | | |
Sbjct 242598 GCATCCTTGTAAAGCATGAAGGGATTGCCAGTCTCGGTCTGAGCCTCCAGGATGGAGTAC 242657
Query 106643 CACA-CATCGGCGGCTGGTACAATGGCGTT--GGCCCGTCCCTCCGC-CTCGTACTTTGT 106698
|| | | | ||| || | |||| || | ||| | ||| ||| ||| ||||
Sbjct 242658 CAGAGCTTTTGCGCCTTG----ATGGTCTTGCGACCCTTACCTTCGCGCTCATACTGCTC 242713
Query 106699 GTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACA 106758
|||||| || || || || || || | || | | ||||| || | || ||
Sbjct 242714 GTAGAGAGCCTCGAATTCATCGCCATAGACATCAGCCAAGCCTGGGCACTCATTGGGGCA 242773
Query 106759 GAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAG 106818
| | || ||| | ||| || ||||| |||||||||||||| || |||||||||||
Sbjct 242774 CATCAAAGTCCACTCGCCATTCTTTTCAACTCGCTTCATGAAAAGATCAGGAATCCACAG 242833
Query 106819 GGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAG 106878
|| | |||||||| | | || |||| || | || || || ||| | |||||
Sbjct 242834 GGCGTAGAAGAGATCACGAGCTCGGACCTCCTCCTTGCCGTGATTCTTTCGAAGATCAAG 242893
Query 106879 GAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACG 106938
| |||| | || ||| |||||||||||||||||||||| |||| || || | | ||
Sbjct 242894 GTACTCGAAGACATCGGCGTGCCATGGCTCAAGATAGATAGCGAAAGCACC---TGGTCG 242950
Query 106939 C------CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAAT 106992
| ||| |||| | || || || || ||| ||| || || || ||||| || |
Sbjct 242951 CTTGTTACCACCTTGGTCAACGTAACGAGCAGTGTTGTTGAAGACTCGGAGCATGGGGAC 243010
Query 106993 AATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATG 107052
|| || | || | ||||||||| || ||| | | | || | | |||
Sbjct 243011 GATGCCGTTCGAGTTACCATTTGTTCCTGCAATGTAGGCTCCGGTAGCGCGGATTCGATG 243070
Query 107053 GATGTGCATCCCAATACCCCCAGCCCACTTTGAGAT--TTGCGCACACTCCGTAAGAGTT 107110
| || | ||||| || ||||| ||| || || | ||||| | | | | | ||
Sbjct 243071 AACGTTGAGGCCAATTCCACCAGCATTCTTGGAAATCATGGCGCA-AGT-CTTCAATGTG 243128
Query 107111 CCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGC 107170
| |||||||||| ||| ||||||||| || ||| |||||| || || | ||
Sbjct 243129 TCGTAGATACCGTCGATACTGTCCTCCTTCATGTCGACAAGGAAACATGAAGAGAGTTGG 243188
Query 107171 GGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAA-CATACCTTGGGA 107229
| | ||| ||||||||| |||||| ||||| | || || |||| || | |||||
Sbjct 243189 GCTTGTGGAGTACCAGCAGCGAAGAGAGTTGGGGAAGCATGCGTGAAGCACTTC-TGGGA 243247
Query 107230 CATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCAC 107289
|||| | ||||||||| | ||| || || ||||| ||||| ||||||| || ||
Sbjct 243248 CATCAGATTGTATGTCTCAATCGCAGCCTCGATATCTTCACCGTGAATGCCGACTGCTAC 243307
Query 107290 ACGCATAAACATGTATTG-GGGTGTTTCCATGAGGATGCCATCGAGCCGTTGAAGATA-G 107347
||||||| ||||| ||| ||| ||| || || |||||| ||| || | || || |
Sbjct 243308 TCGCATAATCATGTGTTGTGGGCGTTCGCA-GATCTTGCCATTGAGGCGGAGGAGGTATG 243366
Query 107348 CTCTTCTCAAGGGTTTTGAGACCAAAGTA 107376
|| ||| || || |||| ||||||||
Sbjct 243367 ATC-GCTCGAGAGTCTTGAAGCCAAAGTA 243394
>seq4
Length=1888314
Score = 113 bits (124), Expect = 5e-20
Identities = 342/523 (65%), Gaps = 28/523 (5%)
Strand=Plus/Plus
Query 116986 TAGTCCCCAACTCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 117045
||||| ||||| ||||||||||||||||| ||||| ||| | || ||||| ||||||
Sbjct 1224147 TAGTCACCAACGCGCTTCTCAAAGAAGTTAGTCTTGCCAGCGAGCGAGATGTTCTCCATA 1224206
Query 117046 AAGTCAAATGGATT------CTTCGCG---TTCCAAATGG-GTGGCACCCCAACTTGTTT 117095
||||||||||| || ||| | ||| | || | || |||
Sbjct 1224207 AAGTCAAATGGGTTGGCAGACTTGTAGACCTTCTCATTGCCGAGGG----CAAGA----- 1224257
Query 117096 GAGGAGACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGAT 117155
|| |||||||| | || |||| ||||| | |||| | |||||||| || |
Sbjct 1224258 -AGCAGACGATCAGCGACGAACTCGATGTATTGCTTCATCAGATTCGAGTTCATGCCAAG 1224316
Query 117156 GAGATTACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCAC 117215
||| ||| || || || || | |||| ||| ||||||||| || || || | |
Sbjct 1224317 GAGTGCACAAGGAAGAGCCTCAGTCAAGAACTCTTGCTCAATCTCGACAGCTTCGGTAAT 1224376
Query 117216 GATGGCGTGGATAGTTTCGGTAGTGGGTCTATTACGCAAAGTCTTGAAGAGCTCCACGGC 117275
|| | | |||| || || | | || | | ||| |||||| ||
Sbjct 1224377 GACGTCTTGGACAGCTTGCTTGCTTGGGCGGTGCTTCAAGTGAGAGAAGAGAAGGCAAGC 1224436
Query 117276 AAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGG 117335
||| || |||||||||||| || || || || |||||||| |||||| || || |
Sbjct 1224437 AAAGTCGGTGTGGAGACCCTCGTCACGAGAGATGAGTTCATTGGAGAAGGTAAGACCAGC 1224496
Query 117336 CATGAGACCCCGCTTCTTCAACCAATAAATAG-CGCAGAATGACCCGGAGAAGAAGATAC 117394
||| ||||| |||||||||||||| | || | ||| ||| || || |||||||||||
Sbjct 1224497 CATAAGACCACGCTTCTTCAACCAGAAGATGGACGC-GAAGGAACCACTGAAGAAGATAC 1224555
Query 117395 CCTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGTGTC---AA 117451
|||| || || || || | || || | || || | ||| || |||| ||
Sbjct 1224556 CCTCGACGGCGGCGAATGCGACGAGACGTTGAGCAAATG---TAGAGTTCTTGTCTTGAA 1224612
Query 117452 ACCATTTCATTGCCCATTTCGCCTTCTTCTCAATACATGGTAC 117494
||| || | ||||| | |||||||||| |||||||| ||
Sbjct 1224613 TCCACTTGACAGCCCAGTCGGCCTTCTTCTTGATACATGGAAC 1224655
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589980276392040
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