Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialocephala_20scopiformis_20[genbank_20GCA_5F001500285.1_202016-
01-07] 71 sequences; 48,876,257 total letters
Query= NC_015280.1
Length=181044
Score E
Sequences producing significant alignments: (Bits) Value
seq33 120 4e-22
>seq33
Length=635198
Score = 120 bits (132), Expect = 4e-22
Identities = 188/269 (70%), Gaps = 0/269 (0%)
Strand=Plus/Plus
Query 153747 GATATTGCTGTAGGTAGTATGCAAAGGTTTGGTATTCCTATGGGATATGGAGGTCCTCAT 153806
|| |||||| | || | | ||| | |||||| | ||| | |||| || || || |||
Sbjct 565822 GACATTGCTTTTGGCAATGCTCAACGTTTTGGTGTACCTTTTGGATTCGGTGGACCACAT 565881
Query 153807 GCTGCATTCTTTGCAACAACAGACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAGGT 153866
||||| ||||||||| || || |||| ||||||||||| || || | || | |||
Sbjct 565882 GCTGCCTTCTTTGCAGTAAGCGATCAGTACAAGAGAAAGATCCCCGGTCGTCTTATTGGT 565941
Query 153867 CAGTCAGTAGATAGTGAAGGTAATAAAGCATACAGATTAGCACTACAGACTAGAGAGCAG 153926
||| ||| || || | || ||| ||||| || | |||||| ||||||||
Sbjct 565942 GTATCAAAAGACAGGTTGGGAGACAAGGCAATGAGATTGGCTTTGCAGACTCGAGAGCAG 566001
Query 153927 CATATCAGGAGAGACAAAGCAACCAGTAACATCTGCACAGCTCAGGCACTGCTGGCTAAT 153986
|| ||| | | || || || |||||||| | ||||| || |||||| || | || ||
Sbjct 566002 CACATCCGACGTGAGAAGGCCACCAGTAATGTATGCACGGCCCAGGCATTGTTAGCAAAC 566061
Query 153987 ATGTCTGGATTCTATGCAGCATATCATGG 154015
||| || ||||||||| | ||||||||
Sbjct 566062 ATGAGTGCATTCTATGCTGTCTATCATGG 566090
Score = 113 bits (124), Expect = 5e-20
Identities = 167/234 (71%), Gaps = 2/234 (1%)
Strand=Plus/Plus
Query 154872 ATTATGATTACATACCCATCTACACATGGTGTATTTGAAACTAACATTA-GACAGATATG 154930
|| ||| | || ||||| |||| ||| ||||||||| || | || | | | | | ||
Sbjct 567022 ATCATGGTCACTTACCCGAGTACATTTGGAGTATTTGAACCTGAGATCAAGGCTG-TCTG 567080
Query 154931 TAAGATCGTTCATGACAATGGTGGTCAGGTATATCTTGATGGAGCAAATCTAAATGCACA 154990
|| | |||||| | ||||||| ||||| || | || || || || | ||||| ||
Sbjct 567081 CAATCTTGTTCATCAACATGGTGGACAGGTTTACATGGACGGCGCCAACATGAATGCCCA 567140
Query 154991 GGTAGGACTAGCAAAACCATGTGAGTATGGTGCAGATGTATGTCATCTAAACTTACATAA 155050
| || | |||| | ||| |||||||||||| || || | ||||| |||||
Sbjct 567141 AATCGGCTTGTGCTCACCAGGGGAGATTGGTGCAGATGTCTGCCACTTGAACTTGCATAA 567200
Query 155051 AACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATAGGTGT 155104
|| ||||||||||| ||||||||||||||||| || || ||||| || |||||
Sbjct 567201 GACTTTCTGTATTCCTCATGGAGGTGGAGGTCCAGGAGTGGGTCCAATTGGTGT 567254
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 579212285948640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |