Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialocephala_20scopiformis_20[genbank_20GCA_5F001500285.1_202016- 01-07] 71 sequences; 48,876,257 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq33 120 4e-22 >seq33 Length=635198 Score = 120 bits (132), Expect = 4e-22 Identities = 188/269 (70%), Gaps = 0/269 (0%) Strand=Plus/Plus Query 153747 GATATTGCTGTAGGTAGTATGCAAAGGTTTGGTATTCCTATGGGATATGGAGGTCCTCAT 153806 || |||||| | || | | ||| | |||||| | ||| | |||| || || || ||| Sbjct 565822 GACATTGCTTTTGGCAATGCTCAACGTTTTGGTGTACCTTTTGGATTCGGTGGACCACAT 565881 Query 153807 GCTGCATTCTTTGCAACAACAGACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAGGT 153866 ||||| ||||||||| || || |||| ||||||||||| || || | || | ||| Sbjct 565882 GCTGCCTTCTTTGCAGTAAGCGATCAGTACAAGAGAAAGATCCCCGGTCGTCTTATTGGT 565941 Query 153867 CAGTCAGTAGATAGTGAAGGTAATAAAGCATACAGATTAGCACTACAGACTAGAGAGCAG 153926 ||| ||| || || | || ||| ||||| || | |||||| |||||||| Sbjct 565942 GTATCAAAAGACAGGTTGGGAGACAAGGCAATGAGATTGGCTTTGCAGACTCGAGAGCAG 566001 Query 153927 CATATCAGGAGAGACAAAGCAACCAGTAACATCTGCACAGCTCAGGCACTGCTGGCTAAT 153986 || ||| | | || || || |||||||| | ||||| || |||||| || | || || Sbjct 566002 CACATCCGACGTGAGAAGGCCACCAGTAATGTATGCACGGCCCAGGCATTGTTAGCAAAC 566061 Query 153987 ATGTCTGGATTCTATGCAGCATATCATGG 154015 ||| || ||||||||| | |||||||| Sbjct 566062 ATGAGTGCATTCTATGCTGTCTATCATGG 566090 Score = 113 bits (124), Expect = 5e-20 Identities = 167/234 (71%), Gaps = 2/234 (1%) Strand=Plus/Plus Query 154872 ATTATGATTACATACCCATCTACACATGGTGTATTTGAAACTAACATTA-GACAGATATG 154930 || ||| | || ||||| |||| ||| ||||||||| || | || | | | | | || Sbjct 567022 ATCATGGTCACTTACCCGAGTACATTTGGAGTATTTGAACCTGAGATCAAGGCTG-TCTG 567080 Query 154931 TAAGATCGTTCATGACAATGGTGGTCAGGTATATCTTGATGGAGCAAATCTAAATGCACA 154990 || | |||||| | ||||||| ||||| || | || || || || | ||||| || Sbjct 567081 CAATCTTGTTCATCAACATGGTGGACAGGTTTACATGGACGGCGCCAACATGAATGCCCA 567140 Query 154991 GGTAGGACTAGCAAAACCATGTGAGTATGGTGCAGATGTATGTCATCTAAACTTACATAA 155050 | || | |||| | ||| |||||||||||| || || | ||||| ||||| Sbjct 567141 AATCGGCTTGTGCTCACCAGGGGAGATTGGTGCAGATGTCTGCCACTTGAACTTGCATAA 567200 Query 155051 AACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATAGGTGT 155104 || ||||||||||| ||||||||||||||||| || || ||||| || ||||| Sbjct 567201 GACTTTCTGTATTCCTCATGGAGGTGGAGGTCCAGGAGTGGGTCCAATTGGTGT 567254 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579212285948640