Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialocephala_20scopiformis_20[genbank_20GCA_5F001500285.1_202016-
01-07] 71 sequences; 48,876,257 total letters
Query= NC_015284.1
Length=183806
Score E
Sequences producing significant alignments: (Bits) Value
seq33 125 8e-24
>seq33
Length=635198
Score = 125 bits (138), Expect = 8e-24
Identities = 189/269 (70%), Gaps = 0/269 (0%)
Strand=Plus/Plus
Query 158422 GACATTGCTGTAGGTAGTATGCAAAGGTTTGGTATTCCTATGGGATACGGAGGTCCTCAT 158481
||||||||| | || | | ||| | |||||| | ||| | |||| ||| || || |||
Sbjct 565822 GACATTGCTTTTGGCAATGCTCAACGTTTTGGTGTACCTTTTGGATTCGGTGGACCACAT 565881
Query 158482 GCTGCATTCTTTGCAACAACAGACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAGGT 158541
||||| ||||||||| || || |||| ||||||||||| || || | || | |||
Sbjct 565882 GCTGCCTTCTTTGCAGTAAGCGATCAGTACAAGAGAAAGATCCCCGGTCGTCTTATTGGT 565941
Query 158542 CAGTCAGTAGATAGCGAAGGTAATAAAGCATACAGATTAGCACTACAGACTAGAGAGCAG 158601
||| ||| || || | || ||| ||||| || | |||||| ||||||||
Sbjct 565942 GTATCAAAAGACAGGTTGGGAGACAAGGCAATGAGATTGGCTTTGCAGACTCGAGAGCAG 566001
Query 158602 CATATCAGAAGAGACAAAGCAACCAGTAACATCTGCACAGCACAAGCACTGCTGGCTAAT 158661
|| ||| || | || || || |||||||| | ||||| || || ||| || | || ||
Sbjct 566002 CACATCCGACGTGAGAAGGCCACCAGTAATGTATGCACGGCCCAGGCATTGTTAGCAAAC 566061
Query 158662 ATGTCTGGGTTCTATGCAGCATATCATGG 158690
||| || |||||||| | ||||||||
Sbjct 566062 ATGAGTGCATTCTATGCTGTCTATCATGG 566090
Score = 118 bits (130), Expect = 1e-21
Identities = 156/214 (73%), Gaps = 2/214 (1%)
Strand=Plus/Plus
Query 159567 TACACATGGTGTATTTGAAACAAACATCA-GACAGATATGTAAGATTGTTCATGAGAATG 159625
|||| ||| ||||||||| | | |||| | | | | || || |||||||| | |||
Sbjct 567042 TACATTTGGAGTATTTGAACCTGAGATCAAGGCTG-TCTGCAATCTTGTTCATCAACATG 567100
Query 159626 GTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACAGGTAGGTCTAGCAAAACCAT 159685
|||| ||||| || | || || || || | ||||| || | || | ||||
Sbjct 567101 GTGGACAGGTTTACATGGACGGCGCCAACATGAATGCCCAAATCGGCTTGTGCTCACCAG 567160
Query 159686 GTGACTATGGTGCAGATGTATGTCATCTAAACTTACATAAGACATTCTGTATTCCACATG 159745
| || |||||||||||| || || | ||||| |||||||| ||||||||||| ||||
Sbjct 567161 GGGAGATTGGTGCAGATGTCTGCCACTTGAACTTGCATAAGACTTTCTGTATTCCTCATG 567220
Query 159746 GAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGT 159779
||||||||||||| || || ||||| ||||||||
Sbjct 567221 GAGGTGGAGGTCCAGGAGTGGGTCCAATTGGTGT 567254
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588050678104560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |