Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialocephala_20scopiformis_20[genbank_20GCA_5F001500285.1_202016- 01-07] 71 sequences; 48,876,257 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq33 125 8e-24 >seq33 Length=635198 Score = 125 bits (138), Expect = 8e-24 Identities = 189/269 (70%), Gaps = 0/269 (0%) Strand=Plus/Plus Query 158422 GACATTGCTGTAGGTAGTATGCAAAGGTTTGGTATTCCTATGGGATACGGAGGTCCTCAT 158481 ||||||||| | || | | ||| | |||||| | ||| | |||| ||| || || ||| Sbjct 565822 GACATTGCTTTTGGCAATGCTCAACGTTTTGGTGTACCTTTTGGATTCGGTGGACCACAT 565881 Query 158482 GCTGCATTCTTTGCAACAACAGACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAGGT 158541 ||||| ||||||||| || || |||| ||||||||||| || || | || | ||| Sbjct 565882 GCTGCCTTCTTTGCAGTAAGCGATCAGTACAAGAGAAAGATCCCCGGTCGTCTTATTGGT 565941 Query 158542 CAGTCAGTAGATAGCGAAGGTAATAAAGCATACAGATTAGCACTACAGACTAGAGAGCAG 158601 ||| ||| || || | || ||| ||||| || | |||||| |||||||| Sbjct 565942 GTATCAAAAGACAGGTTGGGAGACAAGGCAATGAGATTGGCTTTGCAGACTCGAGAGCAG 566001 Query 158602 CATATCAGAAGAGACAAAGCAACCAGTAACATCTGCACAGCACAAGCACTGCTGGCTAAT 158661 || ||| || | || || || |||||||| | ||||| || || ||| || | || || Sbjct 566002 CACATCCGACGTGAGAAGGCCACCAGTAATGTATGCACGGCCCAGGCATTGTTAGCAAAC 566061 Query 158662 ATGTCTGGGTTCTATGCAGCATATCATGG 158690 ||| || |||||||| | |||||||| Sbjct 566062 ATGAGTGCATTCTATGCTGTCTATCATGG 566090 Score = 118 bits (130), Expect = 1e-21 Identities = 156/214 (73%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 159567 TACACATGGTGTATTTGAAACAAACATCA-GACAGATATGTAAGATTGTTCATGAGAATG 159625 |||| ||| ||||||||| | | |||| | | | | || || |||||||| | ||| Sbjct 567042 TACATTTGGAGTATTTGAACCTGAGATCAAGGCTG-TCTGCAATCTTGTTCATCAACATG 567100 Query 159626 GTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACAGGTAGGTCTAGCAAAACCAT 159685 |||| ||||| || | || || || || | ||||| || | || | |||| Sbjct 567101 GTGGACAGGTTTACATGGACGGCGCCAACATGAATGCCCAAATCGGCTTGTGCTCACCAG 567160 Query 159686 GTGACTATGGTGCAGATGTATGTCATCTAAACTTACATAAGACATTCTGTATTCCACATG 159745 | || |||||||||||| || || | ||||| |||||||| ||||||||||| |||| Sbjct 567161 GGGAGATTGGTGCAGATGTCTGCCACTTGAACTTGCATAAGACTTTCTGTATTCCTCATG 567220 Query 159746 GAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGT 159779 ||||||||||||| || || ||||| |||||||| Sbjct 567221 GAGGTGGAGGTCCAGGAGTGGGTCCAATTGGTGT 567254 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588050678104560