Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialocephala_20scopiformis_20[genbank_20GCA_5F001500285.1_202016-
01-07] 71 sequences; 48,876,257 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq4 154 3e-32
seq16 149 1e-30
>seq4
Length=1888314
Score = 154 bits (170), Expect = 3e-32
Identities = 156/203 (77%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997
|||||||| ||||| |||||||| |||||||| | | ||| | || ||||| || |||
Sbjct 716140 TGAAGAGTCGACTCCTTTTGAATGTTGTAATCTGACAAAGTGCGGCCGTCTTCAAGTTGC 716199
Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057
||||| ||||||||||||| || ||||| || || ||||| || || || ||||| ||
Sbjct 716200 TTACCAGCGAAGATAAGTCTCTGCTGGTCGGGTGGGATGCCCTCCTTATCCTGAATCTTG 716259
Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTC 195117
|||||| || || |||||||||||| ||| || || || || | |||||||| |||
Sbjct 716260 GACTTGACATTGTCGATGGTGTCCGAAGATTCAACCTCCAGAGTGATAGTCTTTCCAGTC 716319
Query 195118 AAAGTTTTTACGAACACTTGCAT 195140
||||| || || || | |||||
Sbjct 716320 AAAGTCTTAACAAAGATCTGCAT 716342
Score = 147 bits (162), Expect = 5e-30
Identities = 149/194 (77%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996
|||||| |||||||| || || || || || |||| ||||||| ||||| || || ||
Sbjct 716367 GTGAAGGGTGGACTCCTTCTGGATGTTATAGTCGGAGAGAGTTCGGCCATCCTCAAGTTG 716426
Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056
||| || |||||||| || ||||||||||| || ||||||||||| ||||| ||||| ||
Sbjct 716427 CTTGCCGGCGAAGATGAGACGTTGTTGGTCAGGGGGAATGCCTTCCTTGTCCTGAATCTT 716486
Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116
||| ||||| || ||||| || ||| ||| || ||||| || | ||||| || ||
Sbjct 716487 CGACTTCACGTTGTCGATGGTATCGGAAGATTCGACCTCAAGAGTGATGGTCTTGCCAGT 716546
Query 195117 CAAAGTTTTTACGA 195130
|| || || ||||
Sbjct 716547 CAGGGTCTTGACGA 716560
Score = 145 bits (160), Expect = 2e-29
Identities = 154/203 (76%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997
|| ||||| ||||| ||||| || |||||||| || || | |||||| || | |||
Sbjct 715912 TGGAGAGTCGACTCCTTTTGGATGTTGTAATCACTCAGTGTACGCCCATCCTCCAATTGC 715971
Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057
||||| || ||||| | ||| || ||||| || || || || || |||||||| || ||
Sbjct 715972 TTACCAGCAAAGATCAATCGCTGCTGGTCGGGTGGGATACCCTCCTTGTCTTGGATCTTC 716031
Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTC 195117
|||||| || ||||||||||||||| |||||||| | |||| |||||||| |||
Sbjct 716032 GACTTGACATTGTCAATGGTGTCCGAAGACTCCACTTCCAATGTAATGGTCTTTCCGGTC 716091
Query 195118 AAAGTTTTTACGAACACTTGCAT 195140
||||| || || || | ||||||
Sbjct 716092 AAAGTCTTGACAAAGATTTGCAT 716114
Score = 122 bits (134), Expect = 2e-22
Identities = 138/185 (75%), Gaps = 0/185 (0%)
Strand=Plus/Plus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| || || || || ||||| || ||||| || ||||| | ||| || | || || ||
Sbjct 716646 ACGAGATGGAGGGTAGACTCCTTCTGAATGTTATAATCAGAAAGGGTGCGACCGTCCTCA 716705
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
|||||||| || |||||||| | ||||||||||| || || || || || |||||||||
Sbjct 716706 AGCTGCTTTCCAGCGAAGATCAAGCGTTGTTGGTCGGGTGGGATTCCCTCCTTGTCTTGA 716765
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111
|| || ||||||||| || ||||| ||||| || || ||||| || | ||||||
Sbjct 716766 ATCTTGCTCTTGACGTTATCGATGGTATCCGAGGACTCAACCTCAAGAGTGATGGTCTTT 716825
Query 195112 CCTGT 195116
|| ||
Sbjct 716826 CCGGT 716830
>seq16
Length=1327714
Score = 149 bits (164), Expect = 1e-30
Identities = 153/200 (77%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| || |||||||| ||||| || || || |||||||||| ||||| | ||||| |||
Sbjct 332098 ACGAGATGAAGAGTCGACTCCTTCTGGATGTTGTAATCGGAGAGAGTGCGGCCATCCTCG 332157
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
|| ||||| || |||||||| || ||||||||||| || ||||| ||||| ||||||||
Sbjct 332158 AGTTGCTTGCCAGCGAAGATCAGGCGTTGTTGGTCGGGTGGAATTCCTTCCTTGTCTTGG 332217
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111
||||| |||||| || || ||||| || ||| ||||| || || || | |||||
Sbjct 332218 ATTTTGGACTTGACATTGTCGATGGTATCGGAAGACTCCACCTCGAGTGTGATAGTCTTG 332277
Query 195112 CCTGTCAAAGTTTTTACGAA 195131
|| || | || || |||||
Sbjct 332278 CCCGTGAGGGTCTTGACGAA 332297
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109480590718457
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |