Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialocephala_20scopiformis_20[genbank_20GCA_5F001500285.1_202016-
01-07] 71 sequences; 48,876,257 total letters
Query= NC_018504.1
Length=123876
Score E
Sequences producing significant alignments: (Bits) Value
seq4 114 1e-20
seq26 93.3 3e-14
>seq4
Length=1888314
Score = 114 bits (126), Expect = 1e-20
Identities = 155/216 (72%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 101254 ACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGC 101313
||| | ||| ||||| || || || || ||||| || |||||||| | || | |
Sbjct 715899 ACGGAGAACCAAATGGAGAGTCGACTCCTTTTGGATGTTGTAATCACTCAGTGTACGCCC 715958
Query 101314 ATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTT 101373
||| |||||||||||||| ||||| ||||| ||||| || ||||| || || || || ||
Sbjct 715959 ATCCTCCAATTGCTTACCAGCAAAGATCAATCGCTGCTGGTCGGGTGGGATACCCTCCTT 716018
Query 101374 ATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGAC 101433
||||| || || || ||| | || | ||||| || | |||||||| | || |
Sbjct 716019 GTCTTGGATCTTCGACTTGACATTGTCAATGGTGTCCGAAGACTCCACTTCCAATGTAAT 716078
Query 101434 CGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
|| || ||||| ||||| || ||||| || |||||
Sbjct 716079 GGTCTTTCCGGTCAAAGTCTTGACAAAGATTTGCAT 716114
Score = 100 bits (110), Expect = 2e-16
Identities = 144/203 (71%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302
||||| | | ||| | || || |||||||| || || || || || || || |||| |
Sbjct 716344 CCTCCACGGAGACGGAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTATAGTCGGAG 716403
Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362
| ||||| | |||| || | |||||| || || || || | ||| ||||| || || |||
Sbjct 716404 AGAGTTCGGCCATCCTCAAGTTGCTTGCCGGCGAAGATGAGACGTTGTTGGTCAGGGGGA 716463
Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422
|||||||| || || ||||| || || || | || | || || || | ||| ||
Sbjct 716464 ATGCCTTCCTTGTCCTGAATCTTCGACTTCACGTTGTCGATGGTATCGGAAGATTCGACC 716523
Query 101423 TCAAGAGTGACCGTTTTGCCGGT 101445
|||||||||| || ||||| ||
Sbjct 716524 TCAAGAGTGATGGTCTTGCCAGT 716546
>seq26
Length=969302
Score = 93.3 bits (102), Expect = 3e-14
Identities = 119/164 (73%), Gaps = 0/164 (0%)
Strand=Plus/Minus
Query 101282 TTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATC 101341
||||| || || ||||||| || || | | |||| || | |||||| || ||||| |||
Sbjct 292270 TTTTGGATGTTATAATCGGAGAGGGTACGGCCATCTTCAAGTTGCTTTCCGGCAAAGATC 292211
Query 101342 AAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCT 101401
||||||||||| || || ||||| || || || || || || || || ||| | ||
Sbjct 292210 AAACGCTGTTGGTCCGGTGGAATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 292151
Query 101402 ACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445
| ||| || || | || || |||||||||| || ||||| ||
Sbjct 292150 ATAGTATCGGAGGACTCGACCTCAAGAGTGATGGTCTTGCCCGT 292107
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 396278057095347
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |