Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialocephala_20scopiformis_20[genbank_20GCA_5F001500285.1_202016- 01-07] 71 sequences; 48,876,257 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq4 156 8e-33 >seq4 Length=1888314 Score = 156 bits (172), Expect = 8e-33 Identities = 353/521 (68%), Gaps = 21/521 (4%) Strand=Plus/Plus Query 47840 TGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTCC 47899 |||||||| || || | |||||||||||||| ||||| || | | ||||||||||||| Sbjct 1224144 TGGTAGTCACCAACGCGCTTCTCAAAGAAGTTAGTCTTGCCAGCGAGCGAGATGTTCTCC 1224203 Query 47900 ATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAG-GCCCATCTGTTCCAGCAG 47958 || ||| || ||||||| | || || ||| | ||| ||| | ||||| Sbjct 1224204 ATAAAGTCAAATGGGTTGGCAGACTTGTAGACCT-TCTCATTGCCGAGGGCAAGAAGCAG 1224262 Query 47959 GTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGGA 48018 |||| |||||| |||||||||||| ||| || | ||||||||| | ||| | Sbjct 1224263 ACGATCAGCGACGAACTCGATGTATTGCTTCATCAGATTCGAGTTCATGCCAAGGAGTG- 1224321 Query 48019 CACGGGCAA-AGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCT 48077 ||| | || ||||| || | ||||| | ||| |||| || ||||| | | | Sbjct 1224322 CACAAGGAAGAGCCTCAGTCAAGAACTCTTGCTCAATCTCGACAGCTTCGGTAATGACGT 1224381 Query 48078 GCTTAACGCGGGACTCTGAGGGTTTG-TTGCGCAGGTGCTTGGCAT------AGAGCATG 48130 ||| |||| | | ||| ||| || ||||||| | |||| | | Sbjct 1224382 -CTT------GGACA--GCTTGCTTGCTTGGGC-GGTGCTTCAAGTGAGAGAAGAGAAGG 1224431 Query 48131 CAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGA 48190 || |||||||| |||| | || ||||| || |||||| | ||||||||| ||| Sbjct 1224432 CAAGCAAAGTCGGTGTGGAGACCCTCGTCACGAGAGATGAGTTCATTGGAGAAGGTAAGA 1224491 Query 48191 CCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAG 48250 |||| ||| | || | || || | |||||| || | |||||| || ||| ||||||| Sbjct 1224492 CCAGCCATAAGACCACGCTTCTTCAACCAGAAGATGGACGCGAAGGAACCACTGAAGAAG 1224551 Query 48251 ATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAG 48310 || ||||| || || ||||| ||| ||| | | | || | || |||||||||| Sbjct 1224552 ATACCCTCGACGGCGGCGAATGCGACGAGACGTTGAGCAAATGTAGAGTTCTTGTCTTGA 1224611 Query 48311 ATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGG 48351 ||||| | |||||||| |||||||||||||| ||||| Sbjct 1224612 ATCCACTTGACAGCCCAGTCGGCCTTCTTCTTGATACATGG 1224652 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931531973264640