Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialocephala_20scopiformis_20[genbank_20GCA_5F001500285.1_202016-
01-07] 71 sequences; 48,876,257 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq4 156 8e-33
>seq4
Length=1888314
Score = 156 bits (172), Expect = 8e-33
Identities = 353/521 (68%), Gaps = 21/521 (4%)
Strand=Plus/Plus
Query 47840 TGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTCC 47899
|||||||| || || | |||||||||||||| ||||| || | | |||||||||||||
Sbjct 1224144 TGGTAGTCACCAACGCGCTTCTCAAAGAAGTTAGTCTTGCCAGCGAGCGAGATGTTCTCC 1224203
Query 47900 ATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAG-GCCCATCTGTTCCAGCAG 47958
|| ||| || ||||||| | || || ||| | ||| ||| | |||||
Sbjct 1224204 ATAAAGTCAAATGGGTTGGCAGACTTGTAGACCT-TCTCATTGCCGAGGGCAAGAAGCAG 1224262
Query 47959 GTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGGA 48018
|||| |||||| |||||||||||| ||| || | ||||||||| | ||| |
Sbjct 1224263 ACGATCAGCGACGAACTCGATGTATTGCTTCATCAGATTCGAGTTCATGCCAAGGAGTG- 1224321
Query 48019 CACGGGCAA-AGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCT 48077
||| | || ||||| || | ||||| | ||| |||| || ||||| | | |
Sbjct 1224322 CACAAGGAAGAGCCTCAGTCAAGAACTCTTGCTCAATCTCGACAGCTTCGGTAATGACGT 1224381
Query 48078 GCTTAACGCGGGACTCTGAGGGTTTG-TTGCGCAGGTGCTTGGCAT------AGAGCATG 48130
||| |||| | | ||| ||| || ||||||| | |||| | |
Sbjct 1224382 -CTT------GGACA--GCTTGCTTGCTTGGGC-GGTGCTTCAAGTGAGAGAAGAGAAGG 1224431
Query 48131 CAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGA 48190
|| |||||||| |||| | || ||||| || |||||| | ||||||||| |||
Sbjct 1224432 CAAGCAAAGTCGGTGTGGAGACCCTCGTCACGAGAGATGAGTTCATTGGAGAAGGTAAGA 1224491
Query 48191 CCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAG 48250
|||| ||| | || | || || | |||||| || | |||||| || ||| |||||||
Sbjct 1224492 CCAGCCATAAGACCACGCTTCTTCAACCAGAAGATGGACGCGAAGGAACCACTGAAGAAG 1224551
Query 48251 ATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAG 48310
|| ||||| || || ||||| ||| ||| | | | || | || ||||||||||
Sbjct 1224552 ATACCCTCGACGGCGGCGAATGCGACGAGACGTTGAGCAAATGTAGAGTTCTTGTCTTGA 1224611
Query 48311 ATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGG 48351
||||| | |||||||| |||||||||||||| |||||
Sbjct 1224612 ATCCACTTGACAGCCCAGTCGGCCTTCTTCTTGATACATGG 1224652
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931531973264640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |