Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialocephala_20scopiformis_20[genbank_20GCA_5F001500285.1_202016- 01-07] 71 sequences; 48,876,257 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq42 98.7 5e-16 >seq42 Length=298824 Score = 98.7 bits (108), Expect = 5e-16 Identities = 161/232 (69%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 25888 ATTTGGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGG 25947 ||| || || | ||| ||| || |||| | |||||| || ||| || | ||| || Sbjct 242765 ATTGGGGCACATCAAAGTCCACTCGCCATTCTTTTCAACTCGCTTCATGAAAAGATCAGG 242824 Query 25948 AATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTT 26007 |||||||| || || || | ||| | |||| | || || || |||||||||||| Sbjct 242825 AATCCACAGGGCGTAGAAGAGATCACGAGCTCGGACCTCCTCCTTGCCGTGATTCTTTCG 242884 Query 26008 TAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACC 26067 ||||| | | | || || | ||| | ||||||||| || | ||||||||| ||| ||| Sbjct 242885 AAGATCAAGGTACTCGAAGACATCGGCGTGCCATGGCTCAAGATAGATAGCGAAAGCACC 242944 Query 26068 TTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACT 26119 | || || |||||||| || ||||| | ||||| | ||||| ||| Sbjct 242945 TGGTCGCTTGTTACCACCTTGGTCAACGTAACGAGCAGTGTTGTTGAAGACT 242996 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253039781041325