Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialocephala_20scopiformis_20[genbank_20GCA_5F001500285.1_202016-
01-07] 71 sequences; 48,876,257 total letters
Query= NC_020842.1
Length=79114
Score E
Sequences producing significant alignments: (Bits) Value
seq42 98.7 5e-16
>seq42
Length=298824
Score = 98.7 bits (108), Expect = 5e-16
Identities = 161/232 (69%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 25888 ATTTGGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGG 25947
||| || || | ||| ||| || |||| | |||||| || ||| || | ||| ||
Sbjct 242765 ATTGGGGCACATCAAAGTCCACTCGCCATTCTTTTCAACTCGCTTCATGAAAAGATCAGG 242824
Query 25948 AATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTT 26007
|||||||| || || || | ||| | |||| | || || || ||||||||||||
Sbjct 242825 AATCCACAGGGCGTAGAAGAGATCACGAGCTCGGACCTCCTCCTTGCCGTGATTCTTTCG 242884
Query 26008 TAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACC 26067
||||| | | | || || | ||| | ||||||||| || | ||||||||| ||| |||
Sbjct 242885 AAGATCAAGGTACTCGAAGACATCGGCGTGCCATGGCTCAAGATAGATAGCGAAAGCACC 242944
Query 26068 TTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACT 26119
| || || |||||||| || ||||| | ||||| | ||||| |||
Sbjct 242945 TGGTCGCTTGTTACCACCTTGGTCAACGTAACGAGCAGTGTTGTTGAAGACT 242996
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 253039781041325
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |