Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialocephala_20scopiformis_20[genbank_20GCA_5F001500285.1_202016- 01-07] 71 sequences; 48,876,257 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq42 280 2e-70 seq4 113 5e-20 >seq42 Length=298824 Score = 280 bits (310), Expect = 2e-70 Identities = 1179/1817 (65%), Gaps = 57/1817 (3%) Strand=Plus/Minus Query 75146 TACTTTGGTCTCAAAACCCTTGAGAAGAGC-TATCTTCAACGGCTCGATGGCATCCTCAT 75204 |||||||| |||| || || ||| || | || || | || ||| |||||| || Sbjct 243394 TACTTTGGCTTCAAGACTCTCGAGC-GATCATACCTCCTCCGCCTCAATGGCAAGATCTG 243336 Query 75205 GGAAACCCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGA 75264 ||| |||||| ||||| | ||||| || ||| ||||||| ||||| ||||| || || Sbjct 243335 CGAACGCCCACAACACATGATTATGCGAGTAGCAGTCGGCATTCACGGTGAAGATATCGA 243276 Query 75265 TTCTGTCTTGGAGACATACGACAAGATGTCCCAAGGTATG-TTCATTCACGCAACACCAA 75323 ||| | ||||||||| | ||||||||| | || |||| || || | |||| Sbjct 243275 GGCTGCGATTGAGACATACAATCTGATGTCCCA-GAAGTGCTTCACGCATGCTTCCCCAA 243217 Query 75324 CCCTCTTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACA 75383 | |||||| ||||||||| ||| | | || | || || |||||| ||| || | Sbjct 243216 CTCTCTTCGCTGCTGGTACTCCACAAGCCCAACTCTCTTCATGTTTCCTTGTCGACATGA 243157 Query 75384 AGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAA--ATCTCAAA 75441 |||||||| ||| |||||||||| | || | | | | | ||||| | || || || Sbjct 243156 AGGAGGACAGTATCGACGGTATCTACGACACATTGAAG-ACT-TGCGCCATGATTTCCAA 243099 Query 75442 GTGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCG 75501 | ||||| || ||||| | || | ||| | | || | | | ||| Sbjct 243098 GAATGCTGGTGGAATTGGCCTCAACGTTCATCGAATCCGCGCTACCGGAGCCTACATTGC 243039 Query 75502 GGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGC 75561 || ||||||||| | || | || || | || ||||| || || || ||| ||| || Sbjct 243038 AGGAACAAATGGTAACTCGAACGGCATCGTCCCCATGCTCCGAGTCTTCAACAACACTGC 242979 Query 75562 GCGCTATGTAAATCAAGCGGGGCGTCGCAAGGG-----GTCCAT-CGCGGTCTACTTGGA 75615 || || || | |||| || | |||| | || | | ||| |||| | || Sbjct 242978 TCGTTACGTTGACCAAGGTGG---TAACAAGCGACCAGGTGCTTTCGCTATCTATCTTGA 242922 Query 75616 ACCATGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGA 75675 |||||||| |||||| || | |||| |||||| | ||| || || || | || || Sbjct 242921 GCCATGGCACGCCGATGTCTTCGAGTACCTTGATCTTCGAAAGAATCACGGCAAGGAGGA 242862 Query 75676 GGCTCGGTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGT 75735 || || | | |||||||| | ||||||||||||| || |||||||||||||| || Sbjct 242861 GGTCCGAGCTCGTGATCTCTTCTACGCCCTGTGGATTCCTGATCTTTTCATGAAGCGAGT 242802 Query 75736 TGAGGAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGC 75795 ||| || ||| | ||| || | | || || | || ||||| | | || | Sbjct 242801 TGAAAAGAATGGCGAGTGGACTTTGATGTGCCCCAATGAGTGCCCAGGCTTGGCTGATGT 242742 Query 75796 GGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGC---CAA 75852 || || || || || || |||||| ||||||| || |||| | ||| Sbjct 242741 CTATGGCGATGAATTCGAGGCTCTCTACGAGCAGTATGAGCGCGAAGGTAAGGGTCGCAA 242682 Query 75853 TGCGACTGTACCAGCCGCCGATGTT-TGGAAGGCTATTCTCAAATCACAGACGGAGACTG 75911 ||| | | || ||| | | | ||| | | || || | | ||||| ||||||| Sbjct 242681 ---GACCAT-CAAGGCGCAAAAGCTCTGGTACTCCATCCTGGAGGCTCAGACCGAGACTG 242626 Query 75912 GAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGG 75971 | | || | |||||||||||||||||||| |||| ||||| ||||| |||||| | | Sbjct 242625 GCAATCCCTTCATGCTTTACAAGGATGCTTGCAACAGAAAGAGCAACCAGAAGAATCTCG 242566 Query 75972 GAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGA 76031 | || ||| ||||| || || ||||| || ||| | |||||| | | |||||| Sbjct 242565 GTACCATCCGAAGCTCGAACCTCTGCACTGAGATTGTTGAGTACTGTGCTCCAGATGAGG 242506 Query 76032 CGGCTGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTC--AATGAAGAGACTCG 76089 || || ||||| ||||| ||| | |||||||| | |||||| ||||| | || | Sbjct 242505 TTGCCGTCTGCAACTTGGCTTCACTTGCCCTTCCTACCTATGTCGACATGAACA-AC-GG 242448 Query 76090 CACTTTTGATTATGAAAAACTTCATGAAATC-ACAAAGATTGTTACCAAAAATCTAAACC 76148 ||||| ||| | | | |||||| ||| || | ||| | ||| ||| || | ||| Sbjct 242447 CACTTATGACTTCCAGAGACTTCACGAAGTCTGCCAAG-TCGTTGTCAAGAACTTGAACA 242389 Query 76149 GAGTCATTGACAGAAATTTTTATCCCGTT-GAGACTGCGCGAAAGTCTAATATGCGACAC 76207 ||||||| || | ||| || ||| || | || | | || | || ||| Sbjct 242388 AGATCATTGATGTCAACTATTACCCTGTTCCCGAAGCCAAGAGAAGC-AACTTCCGCCAC 242330 Query 76208 AGACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATT--TTGTGCCGCTACG 76265 ||||||| | | ||||| || ||||| || |||| ||| || | | | || | Sbjct 242329 CGACCTATCGCCGTTGGTGTCCAGGGTCTTGCTGATG-CTTTCTTGGCTCTTCGTCTTC- 242272 Query 76266 CATTTGATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACG 76325 |||| || || || |||||| | | || || ||||| || ||||| || || | Sbjct 242271 CATTCGACTCTCCAGAGGCCAAGCACCTCAACATTCAAATCTTCGAGACCATCTACCATG 242212 Query 76326 CATCCCTGGAGGC--GAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGA 76383 | | || || ||| ||| | || | | | || | |||||||||||||| Sbjct 242211 CCGCACTCACTGCTTCAGT--TGAGCTTGCCAAGGTTGATGGCACTTATGAGACATTTGA 242154 Query 76384 GGGTTCTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCA--AG 76441 ||||||||| || ||| | || | | | |||| ||||||||||| || | ||| || Sbjct 242153 GGGTTCTCCTGCCTCCAAGGGCGAGTTGCAGTATGATATGTGGG-GTGTTACTCCAACAG 242095 Query 76442 CTCAACTACGACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGT 76501 || || || ||||| | ||| | |||||| | | |||||||| || || Sbjct 242094 ATC-TCTGGGATTGGGACAGCTTGAAGCAGAAAATCAAGCAACATGGTCTTCGCAATAG- 242037 Query 76502 CTT--TTGATGGCACCAATGCCAACAGCCTCCACCGCACAAA-TCTTGGGTAATAATGAA 76558 ||| ||| | || || |||||||| ||| |||| |||| |||||| | ||||| Sbjct 242036 CTTGCTTG-TCGCTCCTATGCCAACTGCCAGCACCAGTCAAATTCTTGGCT-TCAATGAG 241979 Query 76559 TGCTTTGAACCATACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTC 76618 |||||||| ||||| || | ||||||||| | | || || || ||||| Sbjct 241978 TGCTTTGAGCCATATACGTCCAACATCTACTCTCGTCGTGTTCTTGCTGGCGAGTTCCAA 241919 Query 76619 ATTGTCAACAAGCACCTCGTCAATGACCTCAAGAAGATTGGTCTCTGGTCCAAGGATATG 76678 | |||||| | |||| || || | || ||||||||||| | | ||| Sbjct 241918 GTCGTCAACCCATGGTTGCTCAAGGATCTTGTTGACATGGGTCTCTGGTCTGACAACATG 241859 Query 76679 AAGGATCTCATGGTGAAAGCGGGTGGTTCCATTCAAAATATCTCAGATATCCCAGATGAT 76738 ||| | | || | | ||||| || ||||| || ||| | | ||||||| |||| Sbjct 241858 AAGAACCGTATCATTGCCGATGGTGGATCGATTCAGAACATCCCCAACATCCCAGCTGAT 241799 Query 76739 ATCAAGAATCTCTACCGCACAGTGTGGGAAA--TCAAGATGAAAGATGTCATTGACATGG 76796 |||||| ||| ||| || || ||||||| ||| ||| | || | | |||| Sbjct 241798 ATCAAGGCTCTTTACAAGACCGTTTGGGAAATCTCACAGCGAACCA--TCGTCCAAATGG 241741 Query 76797 CCGCAGATCGTGGTCGCTT-CATTGATCAAAGTCAAAGTATGAATCTATTCATGGAAAGT 76855 |||| || |||||| |||| |||||| ||| ||| ||||| | |||| | | Sbjct 241740 CCGCTGACCGTGGT-GCTTACATTGACCAATCACAATCGATGAACATTCACATGAAGGAT 241682 Query 76856 CCAACGATGTCCAAGCTCTCTTCTATGCATATGTACGCGTGGAAACAGGGGCTCAAAACC 76915 || || ||| |||| || | |||||| | | ||||| ||| || ||||| Sbjct 241681 CCCACAATGGGCAAGATCACCAGTATGCACTTCGCTGGCTGGAAGTTGGGTCTGAAAACT 241622 Query 76916 GGAATGTACTATCTCCG 76932 || |||||||||||||| Sbjct 241621 GGCATGTACTATCTCCG 241605 >seq4 Length=1888314 Score = 113 bits (124), Expect = 5e-20 Identities = 342/523 (65%), Gaps = 28/523 (5%) Strand=Plus/Minus Query 65008 GTACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGGTTT---GACACAAAGTCT 65064 || |||||||| |||||||||| | ||||| | || ||| || |||| || ||| Sbjct 1224655 GTTCCATGTATCAAGAAGAAGGCCGACTGGGCTGTCAAGTGGATTCAAGACAAGAACTCT 1224596 Query 65065 CGCTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGG 65124 | || || | || || | || || || || ||||||||||||||| || Sbjct 1224595 A---CATTTGCTCAACGTCTCGTCGCATTCGCCGCCGTCGAGGGTATCTTCTTCAGTGGT 1224539 Query 65125 TCATTCTGCG-CTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTC 65183 || ||| ||| | || | |||||||||||||| ||||| ||| | || || |||||| Sbjct 1224538 TCCTTC-GCGTCCATCTTCTGGTTGAAGAAGCGTGGTCTTATGGCTGGTCTTACCTTCTC 1224480 Query 65184 AAATGAACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGCCGTGGAGCTCTTCAA 65243 |||||||| || || || || |||||||||||| || ||||| |||||| Sbjct 1224479 CAATGAACTCATCTCTCGTGACGAGGGTCTCCACACCGACTTTGCTTGCCTTCTCTTCTC 1224420 Query 65244 GACTTTGCGTAATAGACCCACTACCGAAACTATCCACGCCATCGTGAAAGAGGCGGTTGA 65303 ||| | | || | | || || |||| | | || | | || || || || Sbjct 1224419 TCACTTGAAGCACCGCCCAAGCAAGCAAGCTGTCCAAGACGTCATTACCGAAGCTGTCGA 1224360 Query 65304 GATTGAGAAAGGGTTCATCTTGGACGCACTCCCATGTAATCTCATCGGTATGAACTCTGA 65363 ||||||| ||| |||| | || || || || ||| ||| | || |||||||| | Sbjct 1224359 GATTGAGCAAGAGTTCTTGACTGAGGCTCTTCCTTGTGCACTCCTTGGCATGAACTCGAA 1224300 Query 65364 GAAGATGTCCGAGTACATTGAGTATGTGTCGGATCGTCTCCTCAAACAAGTTGGGGTGCC 65423 |||| | ||||| |||| || | |||||||| || ||| || Sbjct 1224299 TCTGATGAAGCAATACATCGAGTTCGTCGCTGATCGTCTGCT------TCTTG----CCC 1224250 Query 65424 AC-CCATTTGGAA---CGCGAAG------AATCCATTTGACTTTATGGAAAACATTAGCC 65473 | || | ||| | ||| || ||||||||||||||||| ||||| | Sbjct 1224249 TCGGCAATGAGAAGGTCTACAAGTCTGCCAACCCATTTGACTTTATGGAGAACATCTCGC 1224190 Query 65474 TTGATGGGAAGACCAACTTCTTTGAGAAGCGAGTTGGGGACTA 65516 | | ||| ||||| ||||||||||||||||| ||||| ||||| Sbjct 1224189 TCGCTGGCAAGACTAACTTCTTTGAGAAGCGCGTTGGTGACTA 1224147 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596569070544480