Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialocephala_20scopiformis_20[genbank_20GCA_5F001500285.1_202016-
01-07] 71 sequences; 48,876,257 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq42 280 2e-70
seq4 113 5e-20
>seq42
Length=298824
Score = 280 bits (310), Expect = 2e-70
Identities = 1179/1817 (65%), Gaps = 57/1817 (3%)
Strand=Plus/Minus
Query 75146 TACTTTGGTCTCAAAACCCTTGAGAAGAGC-TATCTTCAACGGCTCGATGGCATCCTCAT 75204
|||||||| |||| || || ||| || | || || | || ||| |||||| ||
Sbjct 243394 TACTTTGGCTTCAAGACTCTCGAGC-GATCATACCTCCTCCGCCTCAATGGCAAGATCTG 243336
Query 75205 GGAAACCCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGA 75264
||| |||||| ||||| | ||||| || ||| ||||||| ||||| ||||| || ||
Sbjct 243335 CGAACGCCCACAACACATGATTATGCGAGTAGCAGTCGGCATTCACGGTGAAGATATCGA 243276
Query 75265 TTCTGTCTTGGAGACATACGACAAGATGTCCCAAGGTATG-TTCATTCACGCAACACCAA 75323
||| | ||||||||| | ||||||||| | || |||| || || | ||||
Sbjct 243275 GGCTGCGATTGAGACATACAATCTGATGTCCCA-GAAGTGCTTCACGCATGCTTCCCCAA 243217
Query 75324 CCCTCTTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACA 75383
| |||||| ||||||||| ||| | | || | || || |||||| ||| || |
Sbjct 243216 CTCTCTTCGCTGCTGGTACTCCACAAGCCCAACTCTCTTCATGTTTCCTTGTCGACATGA 243157
Query 75384 AGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAA--ATCTCAAA 75441
|||||||| ||| |||||||||| | || | | | | | ||||| | || || ||
Sbjct 243156 AGGAGGACAGTATCGACGGTATCTACGACACATTGAAG-ACT-TGCGCCATGATTTCCAA 243099
Query 75442 GTGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCG 75501
| ||||| || ||||| | || | ||| | | || | | | |||
Sbjct 243098 GAATGCTGGTGGAATTGGCCTCAACGTTCATCGAATCCGCGCTACCGGAGCCTACATTGC 243039
Query 75502 GGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGC 75561
|| ||||||||| | || | || || | || ||||| || || || ||| ||| ||
Sbjct 243038 AGGAACAAATGGTAACTCGAACGGCATCGTCCCCATGCTCCGAGTCTTCAACAACACTGC 242979
Query 75562 GCGCTATGTAAATCAAGCGGGGCGTCGCAAGGG-----GTCCAT-CGCGGTCTACTTGGA 75615
|| || || | |||| || | |||| | || | | ||| |||| | ||
Sbjct 242978 TCGTTACGTTGACCAAGGTGG---TAACAAGCGACCAGGTGCTTTCGCTATCTATCTTGA 242922
Query 75616 ACCATGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGA 75675
|||||||| |||||| || | |||| |||||| | ||| || || || | || ||
Sbjct 242921 GCCATGGCACGCCGATGTCTTCGAGTACCTTGATCTTCGAAAGAATCACGGCAAGGAGGA 242862
Query 75676 GGCTCGGTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGT 75735
|| || | | |||||||| | ||||||||||||| || |||||||||||||| ||
Sbjct 242861 GGTCCGAGCTCGTGATCTCTTCTACGCCCTGTGGATTCCTGATCTTTTCATGAAGCGAGT 242802
Query 75736 TGAGGAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGC 75795
||| || ||| | ||| || | | || || | || ||||| | | || |
Sbjct 242801 TGAAAAGAATGGCGAGTGGACTTTGATGTGCCCCAATGAGTGCCCAGGCTTGGCTGATGT 242742
Query 75796 GGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGC---CAA 75852
|| || || || || || |||||| ||||||| || |||| | |||
Sbjct 242741 CTATGGCGATGAATTCGAGGCTCTCTACGAGCAGTATGAGCGCGAAGGTAAGGGTCGCAA 242682
Query 75853 TGCGACTGTACCAGCCGCCGATGTT-TGGAAGGCTATTCTCAAATCACAGACGGAGACTG 75911
||| | | || ||| | | | ||| | | || || | | ||||| |||||||
Sbjct 242681 ---GACCAT-CAAGGCGCAAAAGCTCTGGTACTCCATCCTGGAGGCTCAGACCGAGACTG 242626
Query 75912 GAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGG 75971
| | || | |||||||||||||||||||| |||| ||||| ||||| |||||| | |
Sbjct 242625 GCAATCCCTTCATGCTTTACAAGGATGCTTGCAACAGAAAGAGCAACCAGAAGAATCTCG 242566
Query 75972 GAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGA 76031
| || ||| ||||| || || ||||| || ||| | |||||| | | ||||||
Sbjct 242565 GTACCATCCGAAGCTCGAACCTCTGCACTGAGATTGTTGAGTACTGTGCTCCAGATGAGG 242506
Query 76032 CGGCTGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTC--AATGAAGAGACTCG 76089
|| || ||||| ||||| ||| | |||||||| | |||||| ||||| | || |
Sbjct 242505 TTGCCGTCTGCAACTTGGCTTCACTTGCCCTTCCTACCTATGTCGACATGAACA-AC-GG 242448
Query 76090 CACTTTTGATTATGAAAAACTTCATGAAATC-ACAAAGATTGTTACCAAAAATCTAAACC 76148
||||| ||| | | | |||||| ||| || | ||| | ||| ||| || | |||
Sbjct 242447 CACTTATGACTTCCAGAGACTTCACGAAGTCTGCCAAG-TCGTTGTCAAGAACTTGAACA 242389
Query 76149 GAGTCATTGACAGAAATTTTTATCCCGTT-GAGACTGCGCGAAAGTCTAATATGCGACAC 76207
||||||| || | ||| || ||| || | || | | || | || |||
Sbjct 242388 AGATCATTGATGTCAACTATTACCCTGTTCCCGAAGCCAAGAGAAGC-AACTTCCGCCAC 242330
Query 76208 AGACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATT--TTGTGCCGCTACG 76265
||||||| | | ||||| || ||||| || |||| ||| || | | | || |
Sbjct 242329 CGACCTATCGCCGTTGGTGTCCAGGGTCTTGCTGATG-CTTTCTTGGCTCTTCGTCTTC- 242272
Query 76266 CATTTGATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACG 76325
|||| || || || |||||| | | || || ||||| || ||||| || || |
Sbjct 242271 CATTCGACTCTCCAGAGGCCAAGCACCTCAACATTCAAATCTTCGAGACCATCTACCATG 242212
Query 76326 CATCCCTGGAGGC--GAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGA 76383
| | || || ||| ||| | || | | | || | ||||||||||||||
Sbjct 242211 CCGCACTCACTGCTTCAGT--TGAGCTTGCCAAGGTTGATGGCACTTATGAGACATTTGA 242154
Query 76384 GGGTTCTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCA--AG 76441
||||||||| || ||| | || | | | |||| ||||||||||| || | ||| ||
Sbjct 242153 GGGTTCTCCTGCCTCCAAGGGCGAGTTGCAGTATGATATGTGGG-GTGTTACTCCAACAG 242095
Query 76442 CTCAACTACGACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGT 76501
|| || || ||||| | ||| | |||||| | | |||||||| || ||
Sbjct 242094 ATC-TCTGGGATTGGGACAGCTTGAAGCAGAAAATCAAGCAACATGGTCTTCGCAATAG- 242037
Query 76502 CTT--TTGATGGCACCAATGCCAACAGCCTCCACCGCACAAA-TCTTGGGTAATAATGAA 76558
||| ||| | || || |||||||| ||| |||| |||| |||||| | |||||
Sbjct 242036 CTTGCTTG-TCGCTCCTATGCCAACTGCCAGCACCAGTCAAATTCTTGGCT-TCAATGAG 241979
Query 76559 TGCTTTGAACCATACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTC 76618
|||||||| ||||| || | ||||||||| | | || || || |||||
Sbjct 241978 TGCTTTGAGCCATATACGTCCAACATCTACTCTCGTCGTGTTCTTGCTGGCGAGTTCCAA 241919
Query 76619 ATTGTCAACAAGCACCTCGTCAATGACCTCAAGAAGATTGGTCTCTGGTCCAAGGATATG 76678
| |||||| | |||| || || | || ||||||||||| | | |||
Sbjct 241918 GTCGTCAACCCATGGTTGCTCAAGGATCTTGTTGACATGGGTCTCTGGTCTGACAACATG 241859
Query 76679 AAGGATCTCATGGTGAAAGCGGGTGGTTCCATTCAAAATATCTCAGATATCCCAGATGAT 76738
||| | | || | | ||||| || ||||| || ||| | | ||||||| ||||
Sbjct 241858 AAGAACCGTATCATTGCCGATGGTGGATCGATTCAGAACATCCCCAACATCCCAGCTGAT 241799
Query 76739 ATCAAGAATCTCTACCGCACAGTGTGGGAAA--TCAAGATGAAAGATGTCATTGACATGG 76796
|||||| ||| ||| || || ||||||| ||| ||| | || | | ||||
Sbjct 241798 ATCAAGGCTCTTTACAAGACCGTTTGGGAAATCTCACAGCGAACCA--TCGTCCAAATGG 241741
Query 76797 CCGCAGATCGTGGTCGCTT-CATTGATCAAAGTCAAAGTATGAATCTATTCATGGAAAGT 76855
|||| || |||||| |||| |||||| ||| ||| ||||| | |||| | |
Sbjct 241740 CCGCTGACCGTGGT-GCTTACATTGACCAATCACAATCGATGAACATTCACATGAAGGAT 241682
Query 76856 CCAACGATGTCCAAGCTCTCTTCTATGCATATGTACGCGTGGAAACAGGGGCTCAAAACC 76915
|| || ||| |||| || | |||||| | | ||||| ||| || |||||
Sbjct 241681 CCCACAATGGGCAAGATCACCAGTATGCACTTCGCTGGCTGGAAGTTGGGTCTGAAAACT 241622
Query 76916 GGAATGTACTATCTCCG 76932
|| ||||||||||||||
Sbjct 241621 GGCATGTACTATCTCCG 241605
>seq4
Length=1888314
Score = 113 bits (124), Expect = 5e-20
Identities = 342/523 (65%), Gaps = 28/523 (5%)
Strand=Plus/Minus
Query 65008 GTACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGGTTT---GACACAAAGTCT 65064
|| |||||||| |||||||||| | ||||| | || ||| || |||| || |||
Sbjct 1224655 GTTCCATGTATCAAGAAGAAGGCCGACTGGGCTGTCAAGTGGATTCAAGACAAGAACTCT 1224596
Query 65065 CGCTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGG 65124
| || || | || || | || || || || ||||||||||||||| ||
Sbjct 1224595 A---CATTTGCTCAACGTCTCGTCGCATTCGCCGCCGTCGAGGGTATCTTCTTCAGTGGT 1224539
Query 65125 TCATTCTGCG-CTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTC 65183
|| ||| ||| | || | |||||||||||||| ||||| ||| | || || ||||||
Sbjct 1224538 TCCTTC-GCGTCCATCTTCTGGTTGAAGAAGCGTGGTCTTATGGCTGGTCTTACCTTCTC 1224480
Query 65184 AAATGAACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGCCGTGGAGCTCTTCAA 65243
|||||||| || || || || |||||||||||| || ||||| ||||||
Sbjct 1224479 CAATGAACTCATCTCTCGTGACGAGGGTCTCCACACCGACTTTGCTTGCCTTCTCTTCTC 1224420
Query 65244 GACTTTGCGTAATAGACCCACTACCGAAACTATCCACGCCATCGTGAAAGAGGCGGTTGA 65303
||| | | || | | || || |||| | | || | | || || || ||
Sbjct 1224419 TCACTTGAAGCACCGCCCAAGCAAGCAAGCTGTCCAAGACGTCATTACCGAAGCTGTCGA 1224360
Query 65304 GATTGAGAAAGGGTTCATCTTGGACGCACTCCCATGTAATCTCATCGGTATGAACTCTGA 65363
||||||| ||| |||| | || || || || ||| ||| | || |||||||| |
Sbjct 1224359 GATTGAGCAAGAGTTCTTGACTGAGGCTCTTCCTTGTGCACTCCTTGGCATGAACTCGAA 1224300
Query 65364 GAAGATGTCCGAGTACATTGAGTATGTGTCGGATCGTCTCCTCAAACAAGTTGGGGTGCC 65423
|||| | ||||| |||| || | |||||||| || ||| ||
Sbjct 1224299 TCTGATGAAGCAATACATCGAGTTCGTCGCTGATCGTCTGCT------TCTTG----CCC 1224250
Query 65424 AC-CCATTTGGAA---CGCGAAG------AATCCATTTGACTTTATGGAAAACATTAGCC 65473
| || | ||| | ||| || ||||||||||||||||| ||||| |
Sbjct 1224249 TCGGCAATGAGAAGGTCTACAAGTCTGCCAACCCATTTGACTTTATGGAGAACATCTCGC 1224190
Query 65474 TTGATGGGAAGACCAACTTCTTTGAGAAGCGAGTTGGGGACTA 65516
| | ||| ||||| ||||||||||||||||| ||||| |||||
Sbjct 1224189 TCGCTGGCAAGACTAACTTCTTTGAGAAGCGCGTTGGTGACTA 1224147
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596569070544480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |