Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialocephala_20scopiformis_20[genbank_20GCA_5F001500285.1_202016-
01-07] 71 sequences; 48,876,257 total letters
Query= NC_021248.1
Length=307691
Score E
Sequences producing significant alignments: (Bits) Value
seq4 107 4e-18
>seq4
Length=1888314
Score = 107 bits (118), Expect = 4e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 192310 CCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGAT 192369
||||| | ||||| | || ||||| | ||| | ||| || ||| || ||||||
Sbjct 715888 CCACCACGGAGACGGAGAACCAAATGGAGAGTCGACTCCTTTTGGATGTTGTAATCACTC 715947
Query 192370 AATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGT 192429
| ||| || |||| |||||||| |||||||||||||| |||| ||| || || |||||
Sbjct 715948 AGTGTACGCCCATCCTCCAATTGCTTACCAGCAAAGATCAATCGCTGCTGGTCGGGTGGG 716007
Query 192430 ATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACT 192489
|| || || || ||||| || || || ||||| || | || || || || |||
Sbjct 716008 ATACCCTCCTTGTCTTGGATCTTCGACTTGACATTGTCAATGGTGTCCGAAGACTCCACT 716067
Query 192490 TCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
|| | |||||||| || || || || || || | ||| || |||||
Sbjct 716068 TCCAATGTAATGGTCTTTCCGGTCAAAGTCTTGACAAAGATTTGCAT 716114
Score = 84.2 bits (92), Expect = 4e-11
Identities = 142/206 (69%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
||||| || | |||||| | || | ||| | |||| ||| || || |||||||||
Sbjct 716625 ATACCGCCACGAAGACGGAGGACGAGATGGAGGGTAGACTCCTTCTGAATGTTATAATCA 716684
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
|| | || || | || || | || || ||||| ||||| || | ||||| || |||
Sbjct 716685 GAAAGGGTGCGACCGTCCTCAAGCTGCTTTCCAGCGAAGATCAAGCGTTGTTGGTCGGGT 716744
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| ||||| || || ||||| || || | || || ||| || | ||| || || ||
Sbjct 716745 GGGATTCCCTCCTTGTCTTGAATCTTGCTCTTGACGTTATCGATGGTATCCGAGGACTCA 716804
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGT 192512
|| || ||||| ||||| || || ||
Sbjct 716805 ACCTCAAGAGTGATGGTCTTTCCGGT 716830
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 984479104430850
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |