Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialocephala_20scopiformis_20[genbank_20GCA_5F001500285.1_202016- 01-07] 71 sequences; 48,876,257 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq7 134 2e-25 seq42 95.1 2e-13 >seq7 Length=1615722 Score = 134 bits (148), Expect = 2e-25 Identities = 95/109 (87%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706 ||| ||||||| |||||||||||||||||||| || | || ||||||||||| |||||| Sbjct 1014492 GCCTCCAACTATCTCGACATCAAGCCCCTCCTTGACGTCGGATGCAAGACCGTCGCCAAC 1014433 Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCA 2035755 | |||||||||||||| |||||||| ||||||||||| || ||||||| Sbjct 1014432 ATGATCAAGGGCAAGTCCCCCGAGGAGATCCGCAAGACATTCAACATCA 1014384 >seq42 Length=298824 Score = 95.1 bits (104), Expect = 2e-13 Identities = 193/287 (67%), Gaps = 0/287 (0%) Strand=Plus/Plus Query 2073541 TGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGAC 2073600 ||||| || || || || |||| ||| ||||| ||||||||||| || | |||||| || Sbjct 242964 TGGTCAACGTAACGAGCAGTGTTGTTGAAGACTCGGAGCATGGGGACGATGCCGTTCGAG 243023 Query 2073601 TCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCCG 2073660 | || || || || || | |||||| || | ||||| | || || | ||| Sbjct 243024 TTACCATTTGTTCCTGCAATGTAGGCTCCGGTAGCGCGGATTCGATGAACGTTGAGGCCA 243083 Query 2073661 ATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTCG 2073720 || || || || |||||| || | ||||| | |||| || |||||||| || ||| Sbjct 243084 ATTCCACCAGCATTCTTGGAAATCATGGCGCAAGTCTTCAATGTGTCGTAGATACCGTCG 243143 Query 2073721 ATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCCG 2073780 || ||| |||||||||| | || || || || ||| ||| | | | || || Sbjct 243144 ATACTGTCCTCCTTCATGTCGACAAGGAAACATGAAGAGAGTTGGGCTTGTGGAGTACCA 243203 Query 2073781 GCATTGAAGAGCGTGGGCGTCGCCGCCGTGTACGACTGTTGGGACAT 2073827 ||| |||||| || || | || |||| | ||| |||||||| Sbjct 243204 GCAGCGAAGAGAGTTGGGGAAGCATGCGTGAAGCACTTCTGGGACAT 243250 Score = 89.7 bits (98), Expect = 8e-12 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 2071877 TCCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTCA 2071936 |||||||| |||| |||||||| || || ||| ||||||||||||||| |||||| | Sbjct 242827 TCCACAGGGCGTAGAAGAGATCACGAGCTCGGACCTCCTCCTTGCCGTGATTCTTTCGAA 242886 Query 2071937 GGTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAG 2071980 | || || | |||| || ||||||||||| ||||| || ||| Sbjct 242887 GATCAAGGTACTCGAAGACATCGGCGTGCCATGGCTCAAGATAG 242930 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916238847406169