Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialocephala_20scopiformis_20[genbank_20GCA_5F001500285.1_202016-
01-07] 71 sequences; 48,876,257 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq7 134 2e-25
seq42 95.1 2e-13
>seq7
Length=1615722
Score = 134 bits (148), Expect = 2e-25
Identities = 95/109 (87%), Gaps = 0/109 (0%)
Strand=Plus/Minus
Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706
||| ||||||| |||||||||||||||||||| || | || ||||||||||| ||||||
Sbjct 1014492 GCCTCCAACTATCTCGACATCAAGCCCCTCCTTGACGTCGGATGCAAGACCGTCGCCAAC 1014433
Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCA 2035755
| |||||||||||||| |||||||| ||||||||||| || |||||||
Sbjct 1014432 ATGATCAAGGGCAAGTCCCCCGAGGAGATCCGCAAGACATTCAACATCA 1014384
>seq42
Length=298824
Score = 95.1 bits (104), Expect = 2e-13
Identities = 193/287 (67%), Gaps = 0/287 (0%)
Strand=Plus/Plus
Query 2073541 TGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGAC 2073600
||||| || || || || |||| ||| ||||| ||||||||||| || | |||||| ||
Sbjct 242964 TGGTCAACGTAACGAGCAGTGTTGTTGAAGACTCGGAGCATGGGGACGATGCCGTTCGAG 243023
Query 2073601 TCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCCG 2073660
| || || || || || | |||||| || | ||||| | || || | |||
Sbjct 243024 TTACCATTTGTTCCTGCAATGTAGGCTCCGGTAGCGCGGATTCGATGAACGTTGAGGCCA 243083
Query 2073661 ATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTCG 2073720
|| || || || |||||| || | ||||| | |||| || |||||||| || |||
Sbjct 243084 ATTCCACCAGCATTCTTGGAAATCATGGCGCAAGTCTTCAATGTGTCGTAGATACCGTCG 243143
Query 2073721 ATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCCG 2073780
|| ||| |||||||||| | || || || || ||| ||| | | | || ||
Sbjct 243144 ATACTGTCCTCCTTCATGTCGACAAGGAAACATGAAGAGAGTTGGGCTTGTGGAGTACCA 243203
Query 2073781 GCATTGAAGAGCGTGGGCGTCGCCGCCGTGTACGACTGTTGGGACAT 2073827
||| |||||| || || | || |||| | ||| ||||||||
Sbjct 243204 GCAGCGAAGAGAGTTGGGGAAGCATGCGTGAAGCACTTCTGGGACAT 243250
Score = 89.7 bits (98), Expect = 8e-12
Identities = 82/104 (79%), Gaps = 0/104 (0%)
Strand=Plus/Plus
Query 2071877 TCCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTCA 2071936
|||||||| |||| |||||||| || || ||| ||||||||||||||| |||||| |
Sbjct 242827 TCCACAGGGCGTAGAAGAGATCACGAGCTCGGACCTCCTCCTTGCCGTGATTCTTTCGAA 242886
Query 2071937 GGTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAG 2071980
| || || | |||| || ||||||||||| ||||| || |||
Sbjct 242887 GATCAAGGTACTCGAAGACATCGGCGTGCCATGGCTCAAGATAG 242930
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7916238847406169
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |