Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialocephala_20scopiformis_20[genbank_20GCA_5F001500285.1_202016- 01-07] 71 sequences; 48,876,257 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq4 120 2e-21 seq1 100 2e-15 >seq4 Length=1888314 Score = 120 bits (132), Expect = 2e-21 Identities = 213/311 (68%), Gaps = 0/311 (0%) Strand=Plus/Minus Query 282152 TTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCTCCC 282211 ||||||||||| || | |||| | | ||||| | || || || || || || ||| Sbjct 923936 TTTCTCTTGAACTCATTAACAAAGTGGTTAACAAGTCTGTTGTCGAAGTCCTCGCCACCC 923877 Query 282212 AATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGA 282271 || | ||| | || | || | | || | ||| | || || |||| | ||| || Sbjct 923876 AAGTGAGTGTCACCAGCAGTGGACTTGACCTCGAAGATACCCTCCTCAATGGTCAAGAGG 923817 Query 282272 GTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGG 282331 | |||||| ||||||||||| | ||| || || || ||||| ||| || Sbjct 923816 GAAACATCGAAAGTTCCACCACCAAGATCGAAGATGAGAACATTGCGTTCACCTTCAACC 923757 Query 282332 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 282391 || || || |||||||| |||| || || || |||||||| || || ||||||| ||| Sbjct 923756 TTCTTGTCGAGACCATAGGCAATGGCGGCTGCGGTTGGTTCGTTGATGATTCTCAGGACA 923697 Query 282392 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 282451 || ||||| || || || ||||| || |||||||| | |||||||||| | || || Sbjct 923696 TTGAGACCGGCGATCAGACCAGCATCCTTTGTGGCTTGACGTTGTGAATCGGTGAAGTAG 923637 Query 282452 GCAGGAACAGT 282462 || || ||||| Sbjct 923636 GCTGGGACAGT 923626 >seq1 Length=2762476 Score = 100 bits (110), Expect = 2e-15 Identities = 90/113 (80%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 435132 TGAATTTTTCTTCCAAGTAATGGCTGGTCGTGAAGGTATTATTAATACAGCTATTAAAAC 435191 |||||| |||||||| | ||||||||||||||||||| ||||| |||| ||| | || || Sbjct 1592119 TGAATTCTTCTTCCATGCAATGGCTGGTCGTGAAGGTCTTATTGATACTGCTGTCAAGAC 1592178 Query 435192 TGCTGATACTGGTTATATTCAAAGAAAACTTGTCAAGATGCTTGAAGATATTA 435244 ||| || |||||||| || ||| | ||||||||| || |||||| ||| Sbjct 1592179 TGCCGAAACTGGTTACATCCAACGTCGTCTTGTCAAGGCTCTCGAAGATGTTA 1592231 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740626914200046