Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialocephala_20scopiformis_20[genbank_20GCA_5F001500285.1_202016- 01-07] 71 sequences; 48,876,257 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq16 95.1 1e-14 seq4 95.1 1e-14 >seq16 Length=1327714 Score = 95.1 bits (104), Expect = 1e-14 Identities = 136/189 (72%), Gaps = 2/189 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || ||||||||| | ||| | | | |||||||| |||||||| Sbjct 332110 GTCGACTCCTTCTGGATGTTGTAATCGGAGAGAGTGCGGCCA-TCCTCGAGTTGCTTGCC 332168 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || || || || |||||||| || || ||||||||||| ||| || ||| Sbjct 332169 AGCGAAGATCAGGCGTTGTTGGTCGGGTGGAATTCCTTCCTTGTCTTGGATTTTGGACTT 332228 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | || |||| | |||||| |||| |||| || ||||| || || || Sbjct 332229 GACATTGTCGATGGTATCGGAAGACTCCACCTCGAGTGTGATAGTCTTGCCCGTGAGGGT 332288 Query 133643 TTTTACGAA 133651 || ||||| Sbjct 332289 CTTGACGAA 332297 >seq4 Length=1888314 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/208 (71%), Gaps = 4/208 (2%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAG--TCCTCGA 133512 ||||| | || ||||| || || || |||||||| | || ||| ||| ||||| | Sbjct 715909 AAATGGAGAGTCGACTCCTTTTGGATGTTGTAATCACTCA--GTGTACGCCCATCCTCCA 715966 Query 133513 GCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGA 133572 ||||| || || | || | |||||||||||||| ||||| || |||||||| || Sbjct 715967 ATTGCTTACCAGCAAAGATCAATCGCTGCTGGTCGGGTGGGATACCCTCCTTGTCTTGGA 716026 Query 133573 TCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632 |||| ||||| | |||| ||||| | | |||||| || | || | ||| || | Sbjct 716027 TCTTCGACTTGACATTGTCAATGGTGTCCGAAGACTCCACTTCCAATGTAATGGTCTTTC 716086 Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCAT 133660 |||||| ||| || || || || ||||| Sbjct 716087 CGGTCAAAGTCTTGACAAAGATTTGCAT 716114 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483420370964040