Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialocephala_20scopiformis_20[genbank_20GCA_5F001500285.1_202016-
01-07] 71 sequences; 48,876,257 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq16 95.1 1e-14
seq4 95.1 1e-14
>seq16
Length=1327714
Score = 95.1 bits (104), Expect = 1e-14
Identities = 136/189 (72%), Gaps = 2/189 (1%)
Strand=Plus/Plus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
|| ||||| ||||| || ||||||||| | ||| | | | |||||||| ||||||||
Sbjct 332110 GTCGACTCCTTCTGGATGTTGTAATCGGAGAGAGTGCGGCCA-TCCTCGAGTTGCTTGCC 332168
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
||| | || || || || |||||||| || || ||||||||||| ||| || |||
Sbjct 332169 AGCGAAGATCAGGCGTTGTTGGTCGGGTGGAATTCCTTCCTTGTCTTGGATTTTGGACTT 332228
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
|| | || | || |||| | |||||| |||| |||| || ||||| || || ||
Sbjct 332229 GACATTGTCGATGGTATCGGAAGACTCCACCTCGAGTGTGATAGTCTTGCCCGTGAGGGT 332288
Query 133643 TTTTACGAA 133651
|| |||||
Sbjct 332289 CTTGACGAA 332297
>seq4
Length=1888314
Score = 95.1 bits (104), Expect = 1e-14
Identities = 147/208 (71%), Gaps = 4/208 (2%)
Strand=Plus/Plus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAG--TCCTCGA 133512
||||| | || ||||| || || || |||||||| | || ||| ||| ||||| |
Sbjct 715909 AAATGGAGAGTCGACTCCTTTTGGATGTTGTAATCACTCA--GTGTACGCCCATCCTCCA 715966
Query 133513 GCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGA 133572
||||| || || | || | |||||||||||||| ||||| || |||||||| ||
Sbjct 715967 ATTGCTTACCAGCAAAGATCAATCGCTGCTGGTCGGGTGGGATACCCTCCTTGTCTTGGA 716026
Query 133573 TCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632
|||| ||||| | |||| ||||| | | |||||| || | || | ||| || |
Sbjct 716027 TCTTCGACTTGACATTGTCAATGGTGTCCGAAGACTCCACTTCCAATGTAATGGTCTTTC 716086
Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCAT 133660
|||||| ||| || || || || |||||
Sbjct 716087 CGGTCAAAGTCTTGACAAAGATTTGCAT 716114
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 483420370964040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |