Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialocephala_20scopiformis_20[genbank_20GCA_5F001500285.1_202016-
01-07] 71 sequences; 48,876,257 total letters
Query= NC_024697.1
Length=370920
Score E
Sequences producing significant alignments: (Bits) Value
seq42 145 2e-29
>seq42
Length=298824
Score = 145 bits (160), Expect = 2e-29
Identities = 466/717 (65%), Gaps = 11/717 (2%)
Strand=Plus/Minus
Query 110304 TATTTTGGTTTCAAAACTCTTGAACGTGCTTATTTACTTCGTGTCAATGGCGAGATCATT 110363
|| ||||| ||||| ||||| || || | || | || || |||||||| |||||
Sbjct 243394 TACTTTGGCTTCAAGACTCTCGAGCGATCATACCTCCTCCGCCTCAATGGCAAGATCTGC 243335
Query 110364 GAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATTAAA 110423
||||| || ||||||||| || | || || || | || ||||| || | ||||| |
Sbjct 243334 GAACGCCCACAACACATGATTATGCGAGTAGCAGTCGGCATTCACGGTGAAGATATCGAG 243275
Query 110424 GCTGTTATTGAATGTTATGATGTATTAAGTAAAAAGAAAGCT--ATTCATGCTACTCCTA 110481
|||| ||||| || || | | | ||| ||| | |||||| | || |
Sbjct 243274 GCTGCGATTGAGACATACAATCTGATGTCCCAGAAGT--GCTTCACGCATGCTTCCCCAA 243217
Query 110482 CCCTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCTTCTAGGAATTA 110541
| || || || || ||| || ||| | |||| || || ||| | | || |
Sbjct 243216 CTCTCTTCGCTGCTGGTACTCCACAAGCCCAACTCTCTTCATGTTTCCTTGTCGACATGA 243157
Query 110542 ACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACTGCTC--TTATTTCTAA 110599
| || || ||| || ||||| || || | || |||| ||| | | ||||| ||
Sbjct 243156 AGGAGGACAGTATCGACGGTATCTACGACACA-TTGAAGACT-TGCGCCATGATTTCCAA 243099
Query 110600 AAACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATATCGC 110659
|| |||| |||||||| | |||||||| || ||| | | ||||| | || ||
Sbjct 243098 GAATGCTGGTGGAATTGGCCTCAACGTTCATCGAATCCGCGCTACCGGAGCCTACATTGC 243039
Query 110660 AACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGC 110719
| | | || ||| || | || | || || ||| | ||||||||||| |||||||
Sbjct 243038 AGGAACAAATGGTAACTCGAACGGCATCGTCCCCATGCTCCGAGTCTTCAACAACACTGC 242979
Query 110720 AAAATATGTGAATCAAGGTGGTAAGA---GAAATGGCTCATTTGCTATCTATCTCGAACC 110776
|| || | ||||||||||| | || || | || ||||||||||| || ||
Sbjct 242978 TCGTTACGTTGACCAAGGTGGTAACAAGCGACCAGGTGCTTTCGCTATCTATCTTGAGCC 242919
Query 110777 TTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAACA 110836
||||| | ||| | || || | | | || ||||| || ||||| || || ||
Sbjct 242918 ATGGCACGCCGATGTCTTCGAGTACCTTGATCTTCGAAAGAATCACGGCAAGGAGGAGGT 242859
Query 110837 AAGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGTTCA 110896
|||| |||||| | || || || |||||||| | ||| | |||||||| || ||| |
Sbjct 242858 CCGAGCTCGTGATCTCTTCTACGCCCTGTGGATTCCTGATCTTTTCATGAAGCGAGTTGA 242799
Query 110897 AGAAAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCTCCTGGTCTATCTGATGTATA 110956
| | |||||| |||| || | ||||| || || | || || | ||||||| ||
Sbjct 242798 AAAGAATGGCGAGTGGACTTTGATGTGCCCCAATGAGTGCCCAGGCTTGGCTGATGTCTA 242739
Query 110957 TGGAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAGAAGGCAAGTTTCGCAA 111013
||| | || || || | || ||||| | ||||| ||||| ||| ||||||
Sbjct 242738 TGGCGATGAATTCGAGGCTCTCTACGAGCAGTATGAGCGCGAAGGTAAGGGTCGCAA 242682
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1186811720371231
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |